RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 FAM76AQ8TAV0 307 aa14.27□□□□□ -0.13
UBE4B-206ENST00000466379 CENPHQ9H3R5 247 aa14.27□□□□□ -0.13
UBE4B-206ENST00000466379 XPNPEP3Q9NQH7 507 aa14.27□□□□□ -0.13
UBE4B-206ENST00000466379 KIAA1257Q9ULG3 409 aa14.27□□□□□ -0.13
UBE4B-206ENST00000466379 ST3GAL5Q9UNP4 418 aa14.27□□□□□ -0.13
UBE4B-206ENST00000466379 hCG_1818297A0A087WSY0 165 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 PTGESO14684 152 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 KPNA6O60684 536 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 RPS6KA5O75582 802 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 CD4P01730 458 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 ADORA2BP29275 332 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 AFF1P51825 1210 aaKnown RBP14.26□□□□□ -0.13
UBE4B-206ENST00000466379 ZNF844Q08AG5 666 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 SLCO2A1Q92959 643 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 LPPQ93052 612 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 ART4Q93070 314 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 UPF3AQ9H1J1 476 aaKnown RBP14.26□□□□□ -0.13
UBE4B-206ENST00000466379 SPC25Q9HBM1 224 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 LCMT1Q9UIC8 334 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 ADAMTS4O75173 837 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 ASGR1P07306 291 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 CD48P09326 243 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 CETN2P41208 172 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 CDKN2BP42772 138 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 PMS2P54278 862 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 DYNLT1P63172 113 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 MTMR3Q13615 1198 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 PTK6Q13882 451 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 CCNG2Q16589 344 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 CCDC142Q17RM4 750 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 SKIDA1Q1XH10 827 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 C15orf59Q2T9L4 293 aaPredicted RBP14.26□□□□□ -0.13
UBE4B-206ENST00000466379 PKDCCQ504Y2 493 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 CCDC25Q86WR0 208 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 ATL2Q8NHH9 583 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 FNIP1Q8TF40 1166 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 EPB41L4BQ9H329 900 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 RNF186Q9NXI6 227 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 DDX56Q9NY93 547 aaKnown RBP14.26□□□□□ -0.13
UBE4B-206ENST00000466379 DNPEPQ9ULA0 475 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 HTTP42858 3142 aa14.26□□□□□ -0.13
UBE4B-206ENST00000466379 C3orf70A6NLC5 250 aaPredicted RBP14.25□□□□□ -0.13
UBE4B-206ENST00000466379 TP73O15350 636 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 GABBR2O75899 941 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 MIPP30301 263 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 MLH1P40692 756 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 TAF6P49848 677 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 KCNA10Q16322 511 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 CDO1Q16878 200 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 LRIG3Q6UXM1 1119 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 UHMK1Q8TAS1 419 aaKnown RBP14.25□□□□□ -0.13
UBE4B-206ENST00000466379 RXFP2Q8WXD0 754 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 HSPH1Q92598 858 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 ZNF560Q96MR9 790 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 B3GNT5Q9BYG0 378 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 GPBP1L1Q9HC44 474 aaPredicted RBP14.25□□□□□ -0.13
UBE4B-206ENST00000466379 LIASO43766 372 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 TJP3O95049 919 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 GAS8O95995 478 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 SHBGP04278 402 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 PRKAR2AP13861 404 aaKnown RBP14.25□□□□□ -0.13
UBE4B-206ENST00000466379 GPD1P21695 349 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 GNL1P36915 607 aaPredicted RBP14.25□□□□□ -0.13
UBE4B-206ENST00000466379 PPARDQ03181 441 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 HADHQ16836 314 aaKnown RBP14.25□□□□□ -0.13
UBE4B-206ENST00000466379 TFDP3Q5H9I0 405 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 GSTA5Q7RTV2 222 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 SERINC5Q86VE9 423 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 OSTM1Q86WC4 334 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 SCUBE3Q8IX30 993 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 GLIS1Q8NBF1 620 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 GRK7Q8WTQ7 553 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 PEBP4Q96S96 227 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 SENP6Q9GZR1 1112 aaPredicted RBP14.25□□□□□ -0.13
UBE4B-206ENST00000466379 MIS12Q9H081 205 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 TMBIM4Q9HC24 238 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 DNAJC17Q9NVM6 304 aaKnown RBP14.25□□□□□ -0.13
UBE4B-206ENST00000466379 SAE1Q9UBE0 346 aaPredicted RBP14.25□□□□□ -0.13
UBE4B-206ENST00000466379 HESX1Q9UBX0 185 aa14.25□□□□□ -0.13
UBE4B-206ENST00000466379 MTRF1LQ9UGC7 380 aaKnown RBP14.25□□□□□ -0.13
UBE4B-206ENST00000466379 CEP350Q5VT06 3117 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 DCAF8L1A6NGE4 600 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 KIF3CO14782 793 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 XPOTO43592 962 aaKnown RBP14.24□□□□□ -0.13
UBE4B-206ENST00000466379 IVDP26440 423 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 CHKAP35790 457 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 ADCY8P40145 1251 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 ITGA8P53708 1063 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 CALCOCO2Q13137 446 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 STILQ15468 1287 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 POLNQ7Z5Q5 900 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 RSPH3Q86UC2 560 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 UNC93AQ86WB7 457 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 APPL2Q8NEU8 664 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 CLEC4CQ8WTT0 213 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 SLC35F5Q8WV83 523 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 CFAP57Q96MR6 1250 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 PWWP2AQ96N64 755 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 SNX25Q9H3E2 840 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 SEMA4AQ9H3S1 761 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms