RNA–Protein interactions for RNA: ENST00000465634.5

TRIM5-208, Transcript of tripartite motif containing 5, human

TSL 1 (best)

Gene TRIM5, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM5-208	ENST00000465634	FMO1	Q01740	532 aa		10.21	□□□□□ -0.77
TRIM5-208	ENST00000465634	PLD1	Q13393	1074 aa		10.21	□□□□□ -0.77
TRIM5-208	ENST00000465634	GOLGA7B	Q2TAP0	167 aa		10.21	□□□□□ -0.77
TRIM5-208	ENST00000465634	ASTE1	Q2TB18	679 aa	Predicted RBP	10.21	□□□□□ -0.77
TRIM5-208	ENST00000465634	C10orf76	Q5T2E6	689 aa		10.21	□□□□□ -0.77
TRIM5-208	ENST00000465634	ZNF571	Q7Z3V5	609 aa	Predicted RBP	10.21	□□□□□ -0.77
TRIM5-208	ENST00000465634	PALB2	Q86YC2	1186 aa		10.21	□□□□□ -0.77
TRIM5-208	ENST00000465634	ATAD1	Q8NBU5	361 aa		10.21	□□□□□ -0.77
TRIM5-208	ENST00000465634	MSANTD4	Q8NCY6	345 aa		10.21	□□□□□ -0.77
TRIM5-208	ENST00000465634	SLC30A5	Q8TAD4	765 aa		10.21	□□□□□ -0.77
TRIM5-208	ENST00000465634	SLC35F5	Q8WV83	523 aa		10.21	□□□□□ -0.77
TRIM5-208	ENST00000465634	KCTD13	Q8WZ19	329 aa		10.21	□□□□□ -0.77
TRIM5-208	ENST00000465634	SPATA17	Q96L03	361 aa		10.21	□□□□□ -0.77
TRIM5-208	ENST00000465634	HSFY1	Q96LI6	401 aa		10.21	□□□□□ -0.77
TRIM5-208	ENST00000465634	LPIN3	Q9BQK8	851 aa		10.21	□□□□□ -0.77
TRIM5-208	ENST00000465634	DEF6	Q9H4E7	631 aa		10.21	□□□□□ -0.77
TRIM5-208	ENST00000465634	NSUN3	Q9H649	340 aa	Known RBP	10.21	□□□□□ -0.77
TRIM5-208	ENST00000465634	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	10.21	□□□□□ -0.77
TRIM5-208	ENST00000465634	DMAP1	Q9NPF5	467 aa	Predicted RBP	10.21	□□□□□ -0.77
TRIM5-208	ENST00000465634	COMMD8	Q9NX08	183 aa		10.21	□□□□□ -0.77
TRIM5-208	ENST00000465634	ABI2	Q9NYB9	513 aa	Predicted RBP	10.21	□□□□□ -0.77
TRIM5-208	ENST00000465634	EHD2	Q9NZN4	543 aa		10.21	□□□□□ -0.77
TRIM5-208	ENST00000465634	NLRC5	Q86WI3	1866 aa		10.21	□□□□□ -0.78
TRIM5-208	ENST00000465634	GBF1	Q92538	1859 aa		10.21	□□□□□ -0.78
TRIM5-208	ENST00000465634		M0QYV0	167 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	RFXAP	O00287	272 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	CLDN5	O00501	218 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	SOX1	O00570	391 aa	Predicted RBP	10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	PRRG1	O14668	218 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	AKR1B10	O60218	316 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	CYP1A1	P04798	512 aa	Predicted RBP	10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	CYP2F1	P24903	491 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	HOXA9	P31269	272 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	CYLC1	P35663	651 aa	Predicted RBP	10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	EIF4A3	P38919	411 aa	Known RBP	10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	GRIK1	P39086	918 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	ACADSB	P45954	432 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	PLA2G4A	P47712	749 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	ALDH1A3	P47895	512 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	RPL34	P49207	117 aa	Known RBP	10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	TSC2	P49815	1807 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	GOLGA8F	Q08AF8	430 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	GOLGA8DP	Q0D2H9	430 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	DUSP4	Q13115	394 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	GRIN2C	Q14957	1233 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	SLC18A3	Q16572	532 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	DUSP6	Q16828	381 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	HABP4	Q5JVS0	413 aa	Known RBP	10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	TAF3	Q5VWG9	929 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	TMEM184A	Q6ZMB5	413 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	CLEC20A	Q6ZU45	233 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	TTC30A	Q86WT1	665 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	GLYCTK	Q8IVS8	523 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	KREMEN2	Q8NCW0	462 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	SLC22A17	Q8WUG5	538 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	SLC20A1	Q8WUM9	679 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	VCPIP1	Q96JH7	1222 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	PGLYRP2	Q96PD5	576 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	GAS2L1	Q99501	681 aa	Predicted RBP	10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	CHP1	Q99653	195 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	SMO	Q99835	787 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	PRDM12	Q9H4Q4	367 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	CYP4F11	Q9HBI6	524 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	LUC7L	Q9NQ29	371 aa	Known RBP	10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	KRT82	Q9NSB4	513 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	ADAMTS1	Q9UHI8	967 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	FBXW11	Q9UKB1	542 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	ASB3	Q9Y575	518 aa		10.2	□□□□□ -0.78
TRIM5-208	ENST00000465634	VWA8	A3KMH1	1905 aa		10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634		A0A087X0T9	212 aa		10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	DDX3X	O00571	662 aa	Known RBP eCLIP	10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	ARHGAP6	O43182	974 aa		10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	RTN2	O75298	545 aa		10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	IPO7	O95373	1038 aa	Known RBP	10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	PAPLN	O95428	1278 aa		10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	LCA5L	O95447	670 aa		10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	VNN2	O95498	520 aa		10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	CALCA	P01258	141 aa		10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	PLEK	P08567	350 aa	Predicted RBP	10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	POU2F2	P09086	479 aa		10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	HNRNPA1	P09651	372 aa	Known RBP eCLIP	10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	FAM228B	P0C875	321 aa		10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	SRGAP2B	P0DMP2	458 aa		10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	UNG	P13051	313 aa	Predicted RBP	10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	NSF	P46459	744 aa	Known RBP	10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	MAP3K7CL	P57077	242 aa		10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	NOMO3	P69849	1222 aa		10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	CENPC	Q03188	943 aa		10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	PDE4C	Q08493	712 aa		10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	KCNC3	Q14003	757 aa		10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	CLEC16A	Q2KHT3	1053 aa		10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	MGAT5B	Q3V5L5	792 aa		10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	LIN9	Q5TKA1	542 aa		10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	ACAD10	Q6JQN1	1059 aa		10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	DENND1B	Q6P3S1	775 aa		10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	ALKBH5	Q6P6C2	394 aa	Known RBP	10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	TMEM110	Q86TL2	294 aa		10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	ITIH5	Q86UX2	942 aa		10.19	□□□□□ -0.78
TRIM5-208	ENST00000465634	ZDHHC17	Q8IUH5	632 aa		10.19	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms