RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 PRICKLE1Q96MT3 831 aaPredicted RBP16.76■□□□□ 0.27
CNOT3-204ENST00000447684 SLC13A1Q9BZW2 595 aa16.76■□□□□ 0.27
CNOT3-204ENST00000447684 BTBD7Q9P203 1132 aa16.76■□□□□ 0.27
CNOT3-204ENST00000447684 WRAP73Q9P2S5 460 aaPredicted RBP16.76■□□□□ 0.27
CNOT3-204ENST00000447684 MYH11P35749 1972 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 A0A088AWK7 358 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 COPEO14579 308 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 GRIN3BO60391 1043 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 ADRA2BP18089 450 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 MPP3Q13368 585 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 ITGA9Q13797 1035 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 GRM2Q14416 872 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 UGT2A3Q6UWM9 527 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 ZNF554Q86TJ5 538 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 KCTD17Q8N5Z5 321 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 TAS1R2Q8TE23 839 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 APOPT1Q96IL0 206 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 ACSS3Q9H6R3 686 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 PPCSQ9HAB8 311 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 KCNK4Q9NYG8 393 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 TMOD2Q9NZR1 351 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 SOX13Q9UN79 622 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 LZTS1Q9Y250 596 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 KAT6AQ92794 2004 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 COL24A1Q17RW2 1714 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 PSTPIP1O43586 416 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 ADRB2P07550 413 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 CHI3L2Q15782 390 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 HSF5Q4G112 596 aaPredicted RBP16.75■□□□□ 0.27
CNOT3-204ENST00000447684 MFSD14BQ5SR56 506 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 LRRC8BQ6P9F7 803 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 SLC9A9Q8IVB4 645 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 CTAGE3PQ8IX95 158 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 LARGE2Q8N3Y3 721 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 EBF4Q9BQW3 602 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 SIKE1Q9BRV8 207 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 PKD2L1Q9P0L9 805 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 STRIP2Q9ULQ0 834 aa16.75■□□□□ 0.27
CNOT3-204ENST00000447684 GAKO14976 1311 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 IQANK1A0A1B0GTG1 560 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 P4HA2O15460 535 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 TRPA1O75762 1119 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 TFAP2AP05549 437 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 SMIM18P0DKX4 95 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 PCSK6P29122 969 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 IRX4P78413 519 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 DCTN2Q13561 401 aaKnown RBP16.74■□□□□ 0.27
CNOT3-204ENST00000447684 ACAP1Q15027 740 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 MAP3K21Q5TCX8 1036 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 EXD1Q8NHP7 514 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 ZFP28Q8NHY6 868 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 HELQQ8TDG4 1101 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 MZB1Q8WU39 189 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 CNBD2Q96M20 576 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 ZDHHC7Q9NXF8 308 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 PCDHGB4Q9UN71 923 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 SHOC2Q9UQ13 582 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 PCDHGB5Q9Y5G0 923 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 BOLA2-SMG1P6H3BVE0 249 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 NDC80O14777 642 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 TLR3O15455 904 aaKnown RBP16.74■□□□□ 0.27
CNOT3-204ENST00000447684 GAS7O60861 476 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 STIP1P31948 543 aaKnown RBP16.74■□□□□ 0.27
CNOT3-204ENST00000447684 ETV4P43268 484 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 NCKAP1LP55160 1127 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 NFIXQ14938 502 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 TSHZ1Q6ZSZ6 1077 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 CDHR3Q6ZTQ4 885 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 CHSY1Q86X52 802 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 KATNAL2Q8IYT4 538 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 METTL25Q8N6Q8 603 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 SRPK1Q96SB4 655 aaKnown RBP16.74■□□□□ 0.27
CNOT3-204ENST00000447684 MRPL1Q9BYD6 325 aaKnown RBP16.74■□□□□ 0.27
CNOT3-204ENST00000447684 PAIP2BQ9ULR5 123 aaKnown RBP16.74■□□□□ 0.27
CNOT3-204ENST00000447684 INPP5FQ9Y2H2 1132 aa16.74■□□□□ 0.27
CNOT3-204ENST00000447684 COL14A1Q05707 1796 aaKnown RBP16.74■□□□□ 0.27
CNOT3-204ENST00000447684 CYB561D2O14569 222 aa16.73■□□□□ 0.27
CNOT3-204ENST00000447684 RGL2O15211 777 aa16.73■□□□□ 0.27
CNOT3-204ENST00000447684 FAM155BO75949 473 aa16.73■□□□□ 0.27
CNOT3-204ENST00000447684 GTF2H1P32780 548 aa16.73■□□□□ 0.27
CNOT3-204ENST00000447684 YWHAGP61981 247 aaKnown RBP eCLIP16.73■□□□□ 0.27
CNOT3-204ENST00000447684 TLR1Q15399 786 aa16.73■□□□□ 0.27
CNOT3-204ENST00000447684 ZCCHC23Q6ZST2 131 aa16.73■□□□□ 0.27
CNOT3-204ENST00000447684 FAM81BQ96LP2 452 aa16.73■□□□□ 0.27
CNOT3-204ENST00000447684 SETDB2Q96T68 719 aa16.73■□□□□ 0.27
CNOT3-204ENST00000447684 DTNAQ9Y4J8 743 aa16.73■□□□□ 0.27
CNOT3-204ENST00000447684 SRCAPQ6ZRS2 3230 aa16.73■□□□□ 0.27
CNOT3-204ENST00000447684 DKC1O60832 514 aaKnown RBP eCLIP16.73■□□□□ 0.27
CNOT3-204ENST00000447684 PROCP04070 461 aa16.73■□□□□ 0.27
CNOT3-204ENST00000447684 SREBF1P36956 1147 aa16.73■□□□□ 0.27
CNOT3-204ENST00000447684 PEX6Q13608 980 aa16.73■□□□□ 0.27
CNOT3-204ENST00000447684 SHROOM1Q2M3G4 852 aaPredicted RBP16.73■□□□□ 0.27
CNOT3-204ENST00000447684 SLC44A4Q53GD3 710 aa16.73■□□□□ 0.27
CNOT3-204ENST00000447684 HSP90AA5PQ58FG0 334 aa16.73■□□□□ 0.27
CNOT3-204ENST00000447684 LIN9Q5TKA1 542 aa16.73■□□□□ 0.27
CNOT3-204ENST00000447684 KRT39Q6A163 491 aa16.73■□□□□ 0.27
CNOT3-204ENST00000447684 AAGABQ6PD74 315 aa16.73■□□□□ 0.27
CNOT3-204ENST00000447684 DENND5BQ6ZUT9 1274 aa16.73■□□□□ 0.27
CNOT3-204ENST00000447684 OTOP1Q7RTM1 612 aa16.73■□□□□ 0.27
CNOT3-204ENST00000447684 TMC7Q7Z402 723 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms