RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 NR2C2P49116 596 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 PSEN2P49810 448 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 MCL1Q07820 350 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 FAM117BQ6P1L5 589 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 ZC3H18Q86VM9 953 aaKnown RBP8.89□□□□□ -0.99
PTPN3-204ENST00000446349 VCPIP1Q96JH7 1222 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 DDIT4Q9NX09 232 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 RAD54BQ9Y620 910 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 TRPC5OSA6NMA1 111 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 GSNP06396 782 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 VIL1P09327 827 aaKnown RBP8.88□□□□□ -0.99
PTPN3-204ENST00000446349 NAA20P61599 178 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 SP3Q02447 781 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 CACNB2Q08289 660 aaPredicted RBP8.88□□□□□ -0.99
PTPN3-204ENST00000446349 PPM1LQ5SGD2 360 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 SLFN11Q7Z7L1 901 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 CXorf38Q8TB03 319 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 MRPL1Q9BYD6 325 aaKnown RBP8.88□□□□□ -0.99
PTPN3-204ENST00000446349 PARD6BQ9BYG5 372 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.88□□□□□ -0.99
PTPN3-204ENST00000446349 GANQ9H2C0 597 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 COPS7BQ9H9Q2 264 aaPredicted RBP8.88□□□□□ -0.99
PTPN3-204ENST00000446349 TRIM17Q9Y577 477 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 VPS26AO75436 327 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 TMEM62Q0P6H9 643 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 NBPF20Q3BBV1 942 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 C16orf89Q6UX73 402 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 TLK2Q86UE8 772 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 BBS7Q8IWZ6 715 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 PPIL6Q8IXY8 311 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 ZFP42Q96MM3 310 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 SERPINB11Q96P15 392 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 RPRD1AQ96P16 312 aaPredicted RBP8.88□□□□□ -0.99
PTPN3-204ENST00000446349 EPC1Q9H2F5 836 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 SYTL2Q9HCH5 934 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 BLOC1S6Q9UL45 172 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 PRG3Q9Y2Y8 225 aaPredicted RBP8.88□□□□□ -0.99
PTPN3-204ENST00000446349 SNTNA6NMZ2 147 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 ATP5BP06576 529 aaKnown RBP8.88□□□□□ -0.99
PTPN3-204ENST00000446349 SESN3P58005 492 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 USP10Q14694 798 aaKnown RBP8.88□□□□□ -0.99
PTPN3-204ENST00000446349 MSL3Q8N5Y2 521 aaKnown RBP8.88□□□□□ -0.99
PTPN3-204ENST00000446349 C3orf20Q8ND61 904 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 CAMKK2Q96RR4 588 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 A0A088AWK7 358 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 WDR91A4D1P6 747 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 PRMT3O60678 531 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 HAUS5O94927 633 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 ZNF10P21506 573 aaPredicted RBP8.88□□□□□ -0.99
PTPN3-204ENST00000446349 EPHB2P29323 1055 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 CCR1P32246 355 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 ACVR2BQ13705 512 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 FBXL16Q8N461 479 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 LRRC71Q8N4P6 559 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 COG1Q8WTW3 980 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 PHF21AQ96BD5 680 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 FBXL21Q9UKT6 434 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 ZNF510Q9Y2H8 683 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 RHOCP08134 193 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 SNRPAP09012 282 aaKnown RBP8.88□□□□□ -0.99
PTPN3-204ENST00000446349 ERVK-10P10266 1014 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 OCA2Q04671 838 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 ZC3H12BQ5HYM0 836 aaKnown RBP8.88□□□□□ -0.99
PTPN3-204ENST00000446349 ELMO2Q96JJ3 720 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 TMEM237Q96Q45 408 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 C20orf96Q9NUD7 363 aaPredicted RBP8.88□□□□□ -0.99
PTPN3-204ENST00000446349 UBXN8O00124 270 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 RFX5P48382 616 aaPredicted RBP8.88□□□□□ -0.99
PTPN3-204ENST00000446349 RGS7P49802 495 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 DNAL1Q4LDG9 190 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 ZNF544Q6NX49 715 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 ADGRG1Q9Y653 693 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 ALDH5A1P51649 535 aaPredicted RBP8.88□□□□□ -0.99
PTPN3-204ENST00000446349 PTGISQ16647 500 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 ZRANB3Q5FWF4 1079 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 REPS2Q8NFH8 660 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 ANKS1AQ92625 1134 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.88□□□□□ -0.99
PTPN3-204ENST00000446349 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.88□□□□□ -0.99
PTPN3-204ENST00000446349 TTC7AQ9ULT0 858 aaPredicted RBP8.88□□□□□ -0.99
PTPN3-204ENST00000446349 TMCO1Q9UM00 188 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 DYRK1BQ9Y463 629 aa8.88□□□□□ -0.99
PTPN3-204ENST00000446349 PARP4Q9UKK3 1724 aaKnown RBP8.87□□□□□ -0.99
PTPN3-204ENST00000446349 A0A0G2JND7 137 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 ADORA2AP29274 412 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 SKOR1P84550 965 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 TROAPQ12815 778 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 FAM43BQ6ZT52 329 aaPredicted RBP8.87□□□□□ -0.99
PTPN3-204ENST00000446349 HS6ST3Q8IZP7 471 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 NR1H4Q96RI1 486 aaPredicted RBP8.87□□□□□ -0.99
PTPN3-204ENST00000446349 SH3GL1Q99961 368 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 APPL1Q9UKG1 709 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 BARX2Q9UMQ3 279 aaPredicted RBP8.87□□□□□ -0.99
PTPN3-204ENST00000446349 ANKRD26Q9UPS8 1709 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 HMBSP08397 361 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 ATP1A3P13637 1013 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 RAP1GDS1P52306 607 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 PRKAA2P54646 552 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 SGCGQ13326 291 aa8.87□□□□□ -0.99
PTPN3-204ENST00000446349 OVOS1Q6IE37 1185 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms