RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 WARSP23381 471 aaKnown RBP12.28□□□□□ -0.44
IRF1-204ENST00000439555 AP3M2P53677 418 aa12.28□□□□□ -0.44
IRF1-204ENST00000439555 CYP24A1Q07973 514 aa12.28□□□□□ -0.44
IRF1-204ENST00000439555 CUL4BQ13620 913 aa12.28□□□□□ -0.44
IRF1-204ENST00000439555 ZNF268Q14587 947 aaPredicted RBP12.28□□□□□ -0.44
IRF1-204ENST00000439555 LPAL2Q16609 132 aa12.28□□□□□ -0.44
IRF1-204ENST00000439555 FOXD4L6Q3SYB3 417 aaPredicted RBP12.28□□□□□ -0.44
IRF1-204ENST00000439555 SCARA3Q6AZY7 606 aa12.28□□□□□ -0.44
IRF1-204ENST00000439555 VSTM1Q6UX27 236 aa12.28□□□□□ -0.44
IRF1-204ENST00000439555 FOXD4L3Q6VB84 417 aaPredicted RBP12.28□□□□□ -0.44
IRF1-204ENST00000439555 C4orf50Q6ZRC1 276 aa12.28□□□□□ -0.44
IRF1-204ENST00000439555 MON1AQ86VX9 555 aa12.28□□□□□ -0.44
IRF1-204ENST00000439555 OSTM1Q86WC4 334 aa12.28□□□□□ -0.44
IRF1-204ENST00000439555 SPATA2LQ8IUW3 424 aaPredicted RBP12.28□□□□□ -0.44
IRF1-204ENST00000439555 KBTBD7Q8WVZ9 684 aa12.28□□□□□ -0.44
IRF1-204ENST00000439555 MRPS31Q92665 395 aaKnown RBP12.28□□□□□ -0.44
IRF1-204ENST00000439555 CGRRF1Q99675 332 aa12.28□□□□□ -0.44
IRF1-204ENST00000439555 PI4K2AQ9BTU6 479 aa12.28□□□□□ -0.44
IRF1-204ENST00000439555 BLZF1Q9H2G9 400 aa12.28□□□□□ -0.44
IRF1-204ENST00000439555 KIF9Q9HAQ2 790 aa12.28□□□□□ -0.44
IRF1-204ENST00000439555 SLC39A2Q9NP94 309 aa12.28□□□□□ -0.44
IRF1-204ENST00000439555 ZZEF1O43149 2961 aa12.28□□□□□ -0.44
IRF1-204ENST00000439555 ACTN4O43707 911 aaKnown RBP12.27□□□□□ -0.45
IRF1-204ENST00000439555 PRAMEF12O95522 483 aa12.27□□□□□ -0.45
IRF1-204ENST00000439555 CST3P01034 146 aaPredicted RBP12.27□□□□□ -0.45
IRF1-204ENST00000439555 DLATP10515 647 aaKnown RBP12.27□□□□□ -0.45
IRF1-204ENST00000439555 TNNI1P19237 187 aa12.27□□□□□ -0.45
IRF1-204ENST00000439555 ACAT1P24752 427 aaKnown RBP12.27□□□□□ -0.45
IRF1-204ENST00000439555 CCNE1P24864 410 aa12.27□□□□□ -0.45
IRF1-204ENST00000439555 CYP2F1P24903 491 aa12.27□□□□□ -0.45
IRF1-204ENST00000439555 ATICP31939 592 aa12.27□□□□□ -0.45
IRF1-204ENST00000439555 AVPR1AP37288 418 aa12.27□□□□□ -0.45
IRF1-204ENST00000439555 AFMP43652 599 aa12.27□□□□□ -0.45
IRF1-204ENST00000439555 KPNA1P52294 538 aaPredicted RBP12.27□□□□□ -0.45
IRF1-204ENST00000439555 CLDN10P78369 228 aa12.27□□□□□ -0.45
IRF1-204ENST00000439555 CYP4F8P98187 520 aa12.27□□□□□ -0.45
IRF1-204ENST00000439555 LRRC32Q14392 662 aa12.27□□□□□ -0.45
IRF1-204ENST00000439555 DGKKQ5KSL6 1271 aa12.27□□□□□ -0.45
IRF1-204ENST00000439555 LMBRD2Q68DH5 695 aaPredicted RBP12.27□□□□□ -0.45
IRF1-204ENST00000439555 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.27□□□□□ -0.45
IRF1-204ENST00000439555 SLC9A9Q8IVB4 645 aa12.27□□□□□ -0.45
IRF1-204ENST00000439555 NELFCDQ8IXH7 590 aa12.27□□□□□ -0.45
IRF1-204ENST00000439555 SYNPOQ8N3V7 929 aa12.27□□□□□ -0.45
IRF1-204ENST00000439555 RDH13Q8NBN7 331 aa12.27□□□□□ -0.45
IRF1-204ENST00000439555 PAGE5Q96GU1 130 aa12.27□□□□□ -0.45
IRF1-204ENST00000439555 FAM84AQ96KN4 292 aa12.27□□□□□ -0.45
IRF1-204ENST00000439555 SPATA17Q96L03 361 aa12.27□□□□□ -0.45
IRF1-204ENST00000439555 FAM83CQ9BQN1 747 aa12.27□□□□□ -0.45
IRF1-204ENST00000439555 LSM14BQ9BX40 385 aaKnown RBP12.27□□□□□ -0.45
IRF1-204ENST00000439555 VRTNQ9H8Y1 702 aa12.27□□□□□ -0.45
IRF1-204ENST00000439555 TDP1Q9NUW8 608 aa12.27□□□□□ -0.45
IRF1-204ENST00000439555 EHD2Q9NZN4 543 aa12.27□□□□□ -0.45
IRF1-204ENST00000439555 RALYQ9UKM9 306 aaKnown RBP12.27□□□□□ -0.45
IRF1-204ENST00000439555 NDRG2Q9UN36 371 aaKnown RBP12.27□□□□□ -0.45
IRF1-204ENST00000439555 HPSEQ9Y251 543 aa12.27□□□□□ -0.45
IRF1-204ENST00000439555 KIF26AQ9ULI4 1882 aaPredicted RBP12.27□□□□□ -0.45
IRF1-204ENST00000439555 NUP205Q92621 2012 aa12.27□□□□□ -0.45
IRF1-204ENST00000439555 FAM237AA0A1B0GTK4 181 aa12.26□□□□□ -0.45
IRF1-204ENST00000439555 SLC38A8A6NNN8 435 aa12.26□□□□□ -0.45
IRF1-204ENST00000439555 SPECC1L-ADORA2AF8WAN1 911 aa12.26□□□□□ -0.45
IRF1-204ENST00000439555 CLIC2O15247 247 aa12.26□□□□□ -0.45
IRF1-204ENST00000439555 KLRC4O43908 158 aa12.26□□□□□ -0.45
IRF1-204ENST00000439555 EXOC3O60645 756 aa12.26□□□□□ -0.45
IRF1-204ENST00000439555 PFKLP17858 780 aa12.26□□□□□ -0.45
IRF1-204ENST00000439555 LMO2P25791 158 aa12.26□□□□□ -0.45
IRF1-204ENST00000439555 CASP1P29466 404 aa12.26□□□□□ -0.45
IRF1-204ENST00000439555 CTHP32929 405 aa12.26□□□□□ -0.45
IRF1-204ENST00000439555 CYP2J2P51589 502 aa12.26□□□□□ -0.45
IRF1-204ENST00000439555 KRT85P78386 507 aa12.26□□□□□ -0.45
IRF1-204ENST00000439555 DDR2Q16832 855 aa12.26□□□□□ -0.45
IRF1-204ENST00000439555 ITPRIPL2Q3MIP1 535 aa12.26□□□□□ -0.45
IRF1-204ENST00000439555 FAM160A2Q8N612 972 aaPredicted RBP12.26□□□□□ -0.45
IRF1-204ENST00000439555 MAB21L3Q8N8X9 362 aa12.26□□□□□ -0.45
IRF1-204ENST00000439555 MYCBPAPQ8TBZ2 947 aa12.26□□□□□ -0.45
IRF1-204ENST00000439555 USP13Q92995 863 aaPredicted RBP12.26□□□□□ -0.45
IRF1-204ENST00000439555 SYAP1Q96A49 352 aaPredicted RBP12.26□□□□□ -0.45
IRF1-204ENST00000439555 CCDC127Q96BQ5 260 aa12.26□□□□□ -0.45
IRF1-204ENST00000439555 MMS19Q96T76 1030 aa12.26□□□□□ -0.45
IRF1-204ENST00000439555 SYT15Q9BQS2 421 aa12.26□□□□□ -0.45
IRF1-204ENST00000439555 EXOC1Q9NV70 894 aa12.26□□□□□ -0.45
IRF1-204ENST00000439555 DMAC2Q9NW81 257 aa12.26□□□□□ -0.45
IRF1-204ENST00000439555 MAGEC2Q9UBF1 373 aaPredicted RBP12.26□□□□□ -0.45
IRF1-204ENST00000439555 SERTAD1Q9UHV2 236 aa12.26□□□□□ -0.45
IRF1-204ENST00000439555 ATP6V1DQ9Y5K8 247 aa12.26□□□□□ -0.45
IRF1-204ENST00000439555 SPEGQ15772 3267 aa12.26□□□□□ -0.45
IRF1-204ENST00000439555 SDK1Q7Z5N4 2213 aa12.25□□□□□ -0.45
IRF1-204ENST00000439555 WDFY3Q8IZQ1 3526 aa12.25□□□□□ -0.45
IRF1-204ENST00000439555 CCDC163A0A0D9SF12 145 aa12.25□□□□□ -0.45
IRF1-204ENST00000439555 TMEM8BA6NDV4 472 aa12.25□□□□□ -0.45
IRF1-204ENST00000439555 K7ESF4 209 aa12.25□□□□□ -0.45
IRF1-204ENST00000439555 PDXKO00764 312 aa12.25□□□□□ -0.45
IRF1-204ENST00000439555 KIF20AO95235 890 aa12.25□□□□□ -0.45
IRF1-204ENST00000439555 KCNK5O95279 499 aa12.25□□□□□ -0.45
IRF1-204ENST00000439555 TCF3P15923 654 aa12.25□□□□□ -0.45
IRF1-204ENST00000439555 PFKFB1P16118 471 aa12.25□□□□□ -0.45
IRF1-204ENST00000439555 GNL1P36915 607 aaPredicted RBP12.25□□□□□ -0.45
IRF1-204ENST00000439555 PPP3CCP48454 512 aa12.25□□□□□ -0.45
IRF1-204ENST00000439555 GPR15P49685 360 aa12.25□□□□□ -0.45
IRF1-204ENST00000439555 PDE6CP51160 858 aa12.25□□□□□ -0.45
IRF1-204ENST00000439555 CDR1P51861 262 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms