RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 ZNF512Q96ME7 567 aaPredicted RBP17.52■□□□□ 0.4
CTDSPL-204ENST00000435525 NOX5Q96PH1 765 aa17.52■□□□□ 0.4
CTDSPL-204ENST00000435525 ZNF518BQ9C0D4 1074 aa17.52■□□□□ 0.4
CTDSPL-204ENST00000435525 TTYH3Q9C0H2 523 aa17.52■□□□□ 0.4
CTDSPL-204ENST00000435525 PIDD1Q9HB75 910 aa17.52■□□□□ 0.4
CTDSPL-204ENST00000435525 TSPAN16Q9UKR8 245 aa17.52■□□□□ 0.4
CTDSPL-204ENST00000435525 SLC27A5Q9Y2P5 690 aa17.52■□□□□ 0.4
CTDSPL-204ENST00000435525 YIPF1Q9Y548 306 aa17.52■□□□□ 0.4
CTDSPL-204ENST00000435525 COL4A4P53420 1690 aaPredicted RBP17.52■□□□□ 0.39
CTDSPL-204ENST00000435525 AKR1B15C9JRZ8 316 aaPredicted RBP17.51■□□□□ 0.39
CTDSPL-204ENST00000435525 M0QYV0 167 aa17.51■□□□□ 0.39
CTDSPL-204ENST00000435525 RNF225M0QZC1 329 aaPredicted RBP17.51■□□□□ 0.39
CTDSPL-204ENST00000435525 O00370 1275 aa17.51■□□□□ 0.39
CTDSPL-204ENST00000435525 CLDN5O00501 218 aa17.51■□□□□ 0.39
CTDSPL-204ENST00000435525 AP5Z1O43299 807 aa17.51■□□□□ 0.39
CTDSPL-204ENST00000435525 CYP11B1P15538 503 aa17.51■□□□□ 0.39
CTDSPL-204ENST00000435525 NPR3P17342 541 aa17.51■□□□□ 0.39
CTDSPL-204ENST00000435525 CASP14P31944 242 aa17.51■□□□□ 0.39
CTDSPL-204ENST00000435525 CLCN1P35523 988 aa17.51■□□□□ 0.39
CTDSPL-204ENST00000435525 BST2Q10589 180 aaKnown RBP17.51■□□□□ 0.39
CTDSPL-204ENST00000435525 TWF1Q12792 350 aa17.51■□□□□ 0.39
CTDSPL-204ENST00000435525 ANKRD54Q6NXT1 300 aa17.51■□□□□ 0.39
CTDSPL-204ENST00000435525 MSANTD4Q8NCY6 345 aa17.51■□□□□ 0.39
CTDSPL-204ENST00000435525 CMASQ8NFW8 434 aaPredicted RBP17.51■□□□□ 0.39
CTDSPL-204ENST00000435525 OR8K1Q8NGG5 319 aa17.51■□□□□ 0.39
CTDSPL-204ENST00000435525 ZNF606Q8WXB4 792 aa17.51■□□□□ 0.39
CTDSPL-204ENST00000435525 BAP1Q92560 729 aa17.51■□□□□ 0.39
CTDSPL-204ENST00000435525 C8orf48Q96LL4 319 aa17.51■□□□□ 0.39
CTDSPL-204ENST00000435525 DUSP16Q9BY84 665 aa17.51■□□□□ 0.39
CTDSPL-204ENST00000435525 GPR88Q9GZN0 384 aa17.51■□□□□ 0.39
CTDSPL-204ENST00000435525 AIPL1Q9NZN9 384 aa17.51■□□□□ 0.39
CTDSPL-204ENST00000435525 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.51■□□□□ 0.39
CTDSPL-204ENST00000435525 SEC24AO95486 1093 aa17.5■□□□□ 0.39
CTDSPL-204ENST00000435525 FGF19O95750 216 aa17.5■□□□□ 0.39
CTDSPL-204ENST00000435525 GYPCP04921 128 aa17.5■□□□□ 0.39
CTDSPL-204ENST00000435525 POU2F2P09086 479 aa17.5■□□□□ 0.39
CTDSPL-204ENST00000435525 PNMA6AP0CW24 399 aaPredicted RBP17.5■□□□□ 0.39
CTDSPL-204ENST00000435525 CSH1P0DML2 217 aa17.5■□□□□ 0.39
CTDSPL-204ENST00000435525 CSH2P0DML3 217 aa17.5■□□□□ 0.39
CTDSPL-204ENST00000435525 GTF2F1P35269 517 aaKnown RBP eCLIP17.5■□□□□ 0.398e-7■□□□□ 10.3
CTDSPL-204ENST00000435525 ITIH3Q06033 890 aa17.5■□□□□ 0.39
CTDSPL-204ENST00000435525 KLHL30Q0D2K2 578 aa17.5■□□□□ 0.39
CTDSPL-204ENST00000435525 TRIM72Q6ZMU5 477 aa17.5■□□□□ 0.39
CTDSPL-204ENST00000435525 SLC47A2Q86VL8 602 aa17.5■□□□□ 0.39
CTDSPL-204ENST00000435525 SPATA17Q96L03 361 aa17.5■□□□□ 0.39
CTDSPL-204ENST00000435525 LPIN3Q9BQK8 851 aa17.5■□□□□ 0.39
CTDSPL-204ENST00000435525 PRKD2Q9BZL6 878 aa17.5■□□□□ 0.39
CTDSPL-204ENST00000435525 PNPLA8Q9NP80 782 aa17.5■□□□□ 0.39
CTDSPL-204ENST00000435525 IMPACTQ9P2X3 320 aa17.5■□□□□ 0.39
CTDSPL-204ENST00000435525 COG5Q9UP83 839 aa17.5■□□□□ 0.39
CTDSPL-204ENST00000435525 CCDC195A0A1B0GUA6 201 aa17.49■□□□□ 0.39
CTDSPL-204ENST00000435525 F8VP50 259 aa17.49■□□□□ 0.39
CTDSPL-204ENST00000435525 MICAL2O94851 1124 aa17.49■□□□□ 0.39
CTDSPL-204ENST00000435525 RTN3O95197 1032 aaPredicted RBP17.49■□□□□ 0.39
CTDSPL-204ENST00000435525 MAP3K7CLP57077 242 aa17.49■□□□□ 0.39
CTDSPL-204ENST00000435525 KCNC3Q14003 757 aa17.49■□□□□ 0.39
CTDSPL-204ENST00000435525 CTC1Q2NKJ3 1217 aa17.49■□□□□ 0.39
CTDSPL-204ENST00000435525 TDRD12Q587J7 1177 aaKnown RBP17.49■□□□□ 0.39
CTDSPL-204ENST00000435525 PPP1R2P3Q6NXS1 205 aa17.49■□□□□ 0.39
CTDSPL-204ENST00000435525 LEMD2Q8NC56 503 aa17.49■□□□□ 0.39
CTDSPL-204ENST00000435525 MAFAQ8NHW3 353 aaPredicted RBP17.49■□□□□ 0.39
CTDSPL-204ENST00000435525 TFAP2BQ92481 460 aa17.49■□□□□ 0.39
CTDSPL-204ENST00000435525 HLA-CQ95604 372 aa17.49■□□□□ 0.39
CTDSPL-204ENST00000435525 RIPOR3Q96MK2 946 aa17.49■□□□□ 0.39
CTDSPL-204ENST00000435525 UBXN6Q9BZV1 441 aa17.49■□□□□ 0.39
CTDSPL-204ENST00000435525 MIS12Q9H081 205 aa17.49■□□□□ 0.39
CTDSPL-204ENST00000435525 COMMD8Q9NX08 183 aa17.49■□□□□ 0.39
CTDSPL-204ENST00000435525 UXTQ9UBK9 157 aaPredicted RBP17.49■□□□□ 0.39
CTDSPL-204ENST00000435525 PCDHGC3Q9UN70 934 aa17.49■□□□□ 0.39
CTDSPL-204ENST00000435525 XPO1O14980 1071 aaKnown RBP17.48■□□□□ 0.39
CTDSPL-204ENST00000435525 LINC01565O15544 149 aa17.48■□□□□ 0.39
CTDSPL-204ENST00000435525 LSM8O95777 96 aaKnown RBP17.48■□□□□ 0.39
CTDSPL-204ENST00000435525 CDR1P51861 262 aa17.48■□□□□ 0.39
CTDSPL-204ENST00000435525 CDR2Q01850 454 aa17.48■□□□□ 0.39
CTDSPL-204ENST00000435525 COL19A1Q14993 1142 aa17.48■□□□□ 0.39
CTDSPL-204ENST00000435525 DDR2Q16832 855 aa17.48■□□□□ 0.39
CTDSPL-204ENST00000435525 CCDC142Q17RM4 750 aa17.48■□□□□ 0.39
CTDSPL-204ENST00000435525 RARS2Q5T160 578 aaKnown RBP17.48■□□□□ 0.39
CTDSPL-204ENST00000435525 TMEM35BQ8NCS4 154 aa17.48■□□□□ 0.39
CTDSPL-204ENST00000435525 EPS8L1Q8TE68 723 aa17.48■□□□□ 0.39
CTDSPL-204ENST00000435525 SMG7Q92540 1137 aaKnown RBP17.48■□□□□ 0.39
CTDSPL-204ENST00000435525 GCNAQ96QF7 691 aa17.48■□□□□ 0.39
CTDSPL-204ENST00000435525 RHOBTB2Q9BYZ6 727 aa17.48■□□□□ 0.39
CTDSPL-204ENST00000435525 LHX5Q9H2C1 402 aa17.48■□□□□ 0.39
CTDSPL-204ENST00000435525 FBXO44Q9H4M3 255 aa17.48■□□□□ 0.39
CTDSPL-204ENST00000435525 LRRC4Q9HBW1 653 aa17.48■□□□□ 0.39
CTDSPL-204ENST00000435525 CSNK1G1Q9HCP0 422 aa17.48■□□□□ 0.39
CTDSPL-204ENST00000435525 SEPT11Q9NVA2 429 aaKnown RBP17.48■□□□□ 0.39
CTDSPL-204ENST00000435525 FAM50BQ9Y247 325 aa17.48■□□□□ 0.39
CTDSPL-204ENST00000435525 VWA8A3KMH1 1905 aa17.48■□□□□ 0.39
CTDSPL-204ENST00000435525 TSC2P49815 1807 aa17.47■□□□□ 0.39
CTDSPL-204ENST00000435525 CCL16O15467 120 aa17.47■□□□□ 0.39
CTDSPL-204ENST00000435525 MFAP3LO75121 409 aa17.47■□□□□ 0.39
CTDSPL-204ENST00000435525 VNN2O95498 520 aa17.47■□□□□ 0.39
CTDSPL-204ENST00000435525 GLP2RO95838 553 aa17.47■□□□□ 0.39
CTDSPL-204ENST00000435525 SERPING1P05155 500 aa17.47■□□□□ 0.39
CTDSPL-204ENST00000435525 PTPN2P17706 415 aa17.47■□□□□ 0.39
CTDSPL-204ENST00000435525 TNFAIP3P21580 790 aa17.47■□□□□ 0.39
CTDSPL-204ENST00000435525 ACADSBP45954 432 aa17.47■□□□□ 0.39
CTDSPL-204ENST00000435525 ATAT1Q5SQI0 421 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms