RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.38□□□□□ -0.59
CCDC171-202ENST00000432954 FBXO40Q9UH90 709 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 GGT7Q9UJ14 662 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 FBXO2Q9UK22 296 aaPredicted RBP11.38□□□□□ -0.59
CCDC171-202ENST00000432954 DTX4Q9Y2E6 619 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 KLF2Q9Y5W3 355 aaPredicted RBP11.38□□□□□ -0.59
CCDC171-202ENST00000432954 A8MXQ7 604 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 ZNF185O15231 689 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 GATCO43716 136 aaKnown RBP11.38□□□□□ -0.59
CCDC171-202ENST00000432954 INHBBP09529 407 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 DBTP11182 482 aaKnown RBP11.38□□□□□ -0.59
CCDC171-202ENST00000432954 PDE6AP16499 860 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 SYN1P17600 705 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 ACAT1P24752 427 aaKnown RBP11.38□□□□□ -0.59
CCDC171-202ENST00000432954 EPHB2P29323 1055 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 PBLDP30039 288 aaPredicted RBP11.38□□□□□ -0.59
CCDC171-202ENST00000432954 RRM2P31350 389 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 CTNNA1P35221 906 aaKnown RBP11.38□□□□□ -0.59
CCDC171-202ENST00000432954 RFC1P35251 1148 aaPredicted RBP11.38□□□□□ -0.59
CCDC171-202ENST00000432954 PBX1P40424 430 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 POLGP54098 1239 aaPredicted RBP11.38□□□□□ -0.59
CCDC171-202ENST00000432954 EIF3BP55884 814 aaKnown RBP11.38□□□□□ -0.59
CCDC171-202ENST00000432954 DLG4P78352 724 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 KRT17Q04695 432 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 ATP1A4Q13733 1029 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 OXA1LQ15070 435 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 UAP1Q16222 522 aaPredicted RBP11.38□□□□□ -0.59
CCDC171-202ENST00000432954 SGCAQ16586 387 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 CYP2A13Q16696 494 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 ACSBG2Q5FVE4 666 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 RTP2Q5QGT7 225 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 C6orf118Q5T5N4 469 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 AAGABQ6PD74 315 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 TMPRSS9Q7Z410 1059 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 C12orf56Q8IXR9 622 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 MB21D2Q8IYB1 491 aaPredicted RBP11.38□□□□□ -0.59
CCDC171-202ENST00000432954 OR52K2Q8NGK3 314 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 BRINP2Q9C0B6 783 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 CPNE7Q9UBL6 633 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 ADD3Q9UEY8 706 aaKnown RBP11.38□□□□□ -0.59
CCDC171-202ENST00000432954 GUCA1BQ9UMX6 200 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 MAGED1Q9Y5V3 778 aaPredicted RBP11.38□□□□□ -0.59
CCDC171-202ENST00000432954 TROQ12816 1431 aaPredicted RBP11.38□□□□□ -0.59
CCDC171-202ENST00000432954 MYH8P13535 1937 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 ARHGEF40Q8TER5 1519 aa11.38□□□□□ -0.59
CCDC171-202ENST00000432954 CYP3A7-CYP3A51PA0A087WV96 503 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 WDR91A4D1P6 747 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 GOLGA8SH3BPF8 625 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 TAF4O00268 1085 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 TNPO2O14787 897 aaKnown RBP11.37□□□□□ -0.59
CCDC171-202ENST00000432954 ONECUT3O60422 494 aaPredicted RBP11.37□□□□□ -0.59
CCDC171-202ENST00000432954 ATG13O75143 517 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 PHF2O75151 1096 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 TSC22D2O75157 780 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 SNAPINO95295 136 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 ASS1P00966 412 aaKnown RBP11.37□□□□□ -0.59
CCDC171-202ENST00000432954 P4HBP07237 508 aaKnown RBP11.37□□□□□ -0.59
CCDC171-202ENST00000432954 HOXB3P14651 431 aaPredicted RBP11.37□□□□□ -0.59
CCDC171-202ENST00000432954 CYP3A7P24462 503 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 PTX3P26022 381 aaPredicted RBP11.37□□□□□ -0.59
CCDC171-202ENST00000432954 PTPN4P29074 926 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 PDE1AP54750 535 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 GHRHRQ02643 423 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 GFPT1Q06210 699 aaPredicted RBP11.37□□□□□ -0.59
CCDC171-202ENST00000432954 RBL2Q08999 1139 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 METTL24Q5JXM2 366 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 LARP1Q6PKG0 1096 aaKnown RBP11.37□□□□□ -0.59
CCDC171-202ENST00000432954 ZER1Q7Z7L7 766 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 STX12Q86Y82 276 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 ZNF579Q8NAF0 562 aaKnown RBP11.37□□□□□ -0.59
CCDC171-202ENST00000432954 CASKIN2Q8WXE0 1202 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 STMN2Q93045 179 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 MARC2Q969Z3 335 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 ZUFSPQ96AP4 578 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 CDCA5Q96FF9 252 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 HS6ST2Q96MM7 605 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 SLC29A1Q99808 456 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 OR2B2Q9GZK3 357 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 PAIP1Q9H074 479 aaKnown RBP11.37□□□□□ -0.59
CCDC171-202ENST00000432954 LHX5Q9H2C1 402 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 NARFLQ9H6Q4 476 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 PPCSQ9HAB8 311 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 SLC35C2Q9NQQ7 365 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.37□□□□□ -0.59
CCDC171-202ENST00000432954 KLHL14Q9P2G3 628 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 PCDHGA2Q9Y5H1 932 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 CARMIL3Q8ND23 1372 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 MTSS1O43312 755 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 MYO1DO94832 1006 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 SNX4O95219 450 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 NR3C2P08235 984 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 RPS17P08708 135 aaKnown RBP11.37□□□□□ -0.59
CCDC171-202ENST00000432954 MARCKSP29966 332 aaPredicted RBP11.37□□□□□ -0.59
CCDC171-202ENST00000432954 ARL1P40616 181 aaPredicted RBP11.37□□□□□ -0.59
CCDC171-202ENST00000432954 ARHGDIAP52565 204 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 CACNB3P54284 484 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 NR1H2P55055 460 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 SUPT20HL1Q3ZLR7 823 aa11.37□□□□□ -0.59
CCDC171-202ENST00000432954 INO80DQ53TQ3 878 aaPredicted RBP11.37□□□□□ -0.59
CCDC171-202ENST00000432954 RALYLQ86SE5 291 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms