RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 MLXIPLQ9NP71 852 aa16.99■□□□□ 0.31
CTSB-203ENST00000420692 WDR35Q9P2L0 1181 aa16.99■□□□□ 0.31
CTSB-203ENST00000420692 BARX2Q9UMQ3 279 aaPredicted RBP16.99■□□□□ 0.31
CTSB-203ENST00000420692 FARP1Q9Y4F1 1045 aaPredicted RBP16.99■□□□□ 0.31
CTSB-203ENST00000420692 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.99■□□□□ 0.31
CTSB-203ENST00000420692 CAPN7Q9Y6W3 813 aa16.99■□□□□ 0.31
CTSB-203ENST00000420692 BANF1O75531 89 aa16.98■□□□□ 0.31
CTSB-203ENST00000420692 TRUB2O95900 331 aaKnown RBP16.98■□□□□ 0.31
CTSB-203ENST00000420692 HMGCRP04035 888 aa16.98■□□□□ 0.31
CTSB-203ENST00000420692 KRT7P08729 469 aa16.98■□□□□ 0.31
CTSB-203ENST00000420692 VDRP11473 427 aa16.98■□□□□ 0.31
CTSB-203ENST00000420692 PLCB3Q01970 1234 aa16.98■□□□□ 0.31
CTSB-203ENST00000420692 ACTN3Q08043 901 aaPredicted RBP16.98■□□□□ 0.31
CTSB-203ENST00000420692 STAT4Q14765 748 aa16.98■□□□□ 0.31
CTSB-203ENST00000420692 MORF4L2Q15014 288 aa16.98■□□□□ 0.31
CTSB-203ENST00000420692 ANKRD22Q5VYY1 191 aa16.98■□□□□ 0.31
CTSB-203ENST00000420692 FBXW10Q5XX13 1052 aa16.98■□□□□ 0.31
CTSB-203ENST00000420692 CCT6BQ92526 530 aa16.98■□□□□ 0.31
CTSB-203ENST00000420692 SYNCQ9H7C4 482 aa16.98■□□□□ 0.31
CTSB-203ENST00000420692 TMEM51Q9NW97 253 aa16.98■□□□□ 0.31
CTSB-203ENST00000420692 PNMA3Q9UL41 463 aa16.98■□□□□ 0.31
CTSB-203ENST00000420692 SGK1O00141 431 aa16.98■□□□□ 0.31
CTSB-203ENST00000420692 PPEF2O14830 753 aa16.98■□□□□ 0.31
CTSB-203ENST00000420692 ALOX15BO15296 676 aa16.98■□□□□ 0.31
CTSB-203ENST00000420692 IFNB1P01574 187 aa16.98■□□□□ 0.31
CTSB-203ENST00000420692 HOXA11P31270 313 aaPredicted RBP16.98■□□□□ 0.31
CTSB-203ENST00000420692 MYO1EQ12965 1108 aa16.98■□□□□ 0.31
CTSB-203ENST00000420692 MKRN3Q13064 507 aaKnown RBP16.98■□□□□ 0.31
CTSB-203ENST00000420692 GRIK4Q16099 956 aa16.98■□□□□ 0.31
CTSB-203ENST00000420692 TTC31Q49AM3 519 aaPredicted RBP16.98■□□□□ 0.31
CTSB-203ENST00000420692 DPH6Q7L8W6 267 aa16.98■□□□□ 0.31
CTSB-203ENST00000420692 PPP1R13LQ8WUF5 828 aa16.98■□□□□ 0.31
CTSB-203ENST00000420692 ZMAT2Q96NC0 199 aaKnown RBP16.98■□□□□ 0.31
CTSB-203ENST00000420692 ACAP3Q96P50 834 aa16.98■□□□□ 0.31
CTSB-203ENST00000420692 SYT17Q9BSW7 474 aa16.98■□□□□ 0.31
CTSB-203ENST00000420692 C2CD2Q9Y426 696 aa16.98■□□□□ 0.31
CTSB-203ENST00000420692 CDH16O75309 829 aa16.97■□□□□ 0.31
CTSB-203ENST00000420692 HOXD8P13378 290 aaPredicted RBP16.97■□□□□ 0.31
CTSB-203ENST00000420692 BRAFP15056 766 aa16.97■□□□□ 0.31
CTSB-203ENST00000420692 UNC45BQ8IWX7 931 aa16.97■□□□□ 0.31
CTSB-203ENST00000420692 BRI3BPQ8WY22 251 aa16.97■□□□□ 0.31
CTSB-203ENST00000420692 UPF1Q92900 1129 aaKnown RBP eCLIP16.97■□□□□ 0.315e-29■■■■■ 115.6
CTSB-203ENST00000420692 CDHR5Q9HBB8 845 aa16.97■□□□□ 0.31
CTSB-203ENST00000420692 ITGA11Q9UKX5 1188 aa16.97■□□□□ 0.31
CTSB-203ENST00000420692 ENDOD1O94919 500 aa16.97■□□□□ 0.31
CTSB-203ENST00000420692 STAU1O95793 577 aaKnown RBP16.97■□□□□ 0.31
CTSB-203ENST00000420692 NRLP54845 237 aa16.97■□□□□ 0.31
CTSB-203ENST00000420692 CCNA1P78396 465 aa16.97■□□□□ 0.31
CTSB-203ENST00000420692 RBP5P82980 135 aa16.97■□□□□ 0.31
CTSB-203ENST00000420692 MMRN1Q13201 1228 aa16.97■□□□□ 0.31
CTSB-203ENST00000420692 HADHQ16836 314 aaKnown RBP16.97■□□□□ 0.31
CTSB-203ENST00000420692 MSS51Q4VC12 460 aa16.97■□□□□ 0.31
CTSB-203ENST00000420692 ANKRD20A8PQ5CZ79 823 aa16.97■□□□□ 0.31
CTSB-203ENST00000420692 FAM182AQ5T1J6 154 aa16.97■□□□□ 0.31
CTSB-203ENST00000420692 FAM102AQ5T9C2 384 aaPredicted RBP16.97■□□□□ 0.31
CTSB-203ENST00000420692 DPY19L2Q6NUT2 758 aa16.97■□□□□ 0.31
CTSB-203ENST00000420692 LCLAT1Q6UWP7 414 aa16.97■□□□□ 0.31
CTSB-203ENST00000420692 ZNF467Q7Z7K2 595 aaPredicted RBP16.97■□□□□ 0.31
CTSB-203ENST00000420692 ANKRD42Q8N9B4 389 aa16.97■□□□□ 0.31
CTSB-203ENST00000420692 CPT1BQ92523 772 aa16.97■□□□□ 0.31
CTSB-203ENST00000420692 ELAC2Q9BQ52 826 aaKnown RBP16.97■□□□□ 0.31
CTSB-203ENST00000420692 WDR83Q9BRX9 315 aaKnown RBP16.97■□□□□ 0.31
CTSB-203ENST00000420692 GJD2Q9UKL4 321 aa16.97■□□□□ 0.31
CTSB-203ENST00000420692 USP18Q9UMW8 372 aa16.97■□□□□ 0.31
CTSB-203ENST00000420692 TCRBV7S3A2A0A539 114 aa16.96■□□□□ 0.31
CTSB-203ENST00000420692 C2CD4BA6NLJ0 364 aa16.96■□□□□ 0.31
CTSB-203ENST00000420692 E5RJQ4 531 aa16.96■□□□□ 0.31
CTSB-203ENST00000420692 GOLGA8MH3BSY2 632 aa16.96■□□□□ 0.31
CTSB-203ENST00000420692 GABBR2O75899 941 aa16.96■□□□□ 0.31
CTSB-203ENST00000420692 MMP3P08254 477 aa16.96■□□□□ 0.31
CTSB-203ENST00000420692 VIMP08670 466 aaKnown RBP16.96■□□□□ 0.31
CTSB-203ENST00000420692 RPL22P35268 128 aaKnown RBP16.96■□□□□ 0.31
CTSB-203ENST00000420692 ZNF143P52747 638 aaPredicted RBP16.96■□□□□ 0.31
CTSB-203ENST00000420692 KIZQ2M2Z5 673 aa16.96■□□□□ 0.31
CTSB-203ENST00000420692 LACTB2Q53H82 288 aaPredicted RBP16.96■□□□□ 0.31
CTSB-203ENST00000420692 CCDC121Q6ZUS5 278 aa16.96■□□□□ 0.31
CTSB-203ENST00000420692 FAM183BPQ6ZVS7 135 aa16.96■□□□□ 0.31
CTSB-203ENST00000420692 SRRM1Q8IYB3 904 aaKnown RBP16.96■□□□□ 0.31
CTSB-203ENST00000420692 CCDC13Q8IYE1 715 aa16.96■□□□□ 0.31
CTSB-203ENST00000420692 CCDC197Q8NCU1 140 aa16.96■□□□□ 0.31
CTSB-203ENST00000420692 HSPH1Q92598 858 aa16.96■□□□□ 0.31
CTSB-203ENST00000420692 KIF12Q96FN5 646 aa16.96■□□□□ 0.31
CTSB-203ENST00000420692 ADAMTS10Q9H324 1103 aa16.96■□□□□ 0.31
CTSB-203ENST00000420692 KCNK9Q9NPC2 374 aa16.96■□□□□ 0.31
CTSB-203ENST00000420692 TSPAN16Q9UKR8 245 aa16.96■□□□□ 0.31
CTSB-203ENST00000420692 SHOC2Q9UQ13 582 aa16.96■□□□□ 0.31
CTSB-203ENST00000420692 TCP11X1B4DZS4 312 aa16.96■□□□□ 0.3
CTSB-203ENST00000420692 GRM5P41594 1212 aa16.96■□□□□ 0.3
CTSB-203ENST00000420692 GPX6P59796 221 aa16.96■□□□□ 0.3
CTSB-203ENST00000420692 PDE4CQ08493 712 aa16.96■□□□□ 0.3
CTSB-203ENST00000420692 ADCY1Q08828 1119 aa16.96■□□□□ 0.3
CTSB-203ENST00000420692 TMEM62Q0P6H9 643 aa16.96■□□□□ 0.3
CTSB-203ENST00000420692 C15orf59Q2T9L4 293 aaPredicted RBP16.96■□□□□ 0.3
CTSB-203ENST00000420692 FNBP1LQ5T0N5 605 aa16.96■□□□□ 0.3
CTSB-203ENST00000420692 NAT8LQ8N9F0 302 aa16.96■□□□□ 0.3
CTSB-203ENST00000420692 KCTD6Q8NC69 237 aa16.96■□□□□ 0.3
CTSB-203ENST00000420692 GTF3C2Q8WUA4 911 aaPredicted RBP16.96■□□□□ 0.3
CTSB-203ENST00000420692 CKAP2Q8WWK9 683 aa16.96■□□□□ 0.3
CTSB-203ENST00000420692 RXFP2Q8WXD0 754 aa16.96■□□□□ 0.3
CTSB-203ENST00000420692 KHSRPQ92945 711 aaKnown RBP eCLIP16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms