RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 EIF3DO15371 548 aaKnown RBP eCLIP17.66■□□□□ 0.42
SCAMP4-203ENST00000411971 POLR2DO15514 142 aaKnown RBP17.66■□□□□ 0.42
SCAMP4-203ENST00000411971 YEATS4O95619 227 aa17.66■□□□□ 0.42
SCAMP4-203ENST00000411971 WARSP23381 471 aaKnown RBP17.66■□□□□ 0.42
SCAMP4-203ENST00000411971 DDX6P26196 483 aaKnown RBP eCLIP17.66■□□□□ 0.42
SCAMP4-203ENST00000411971 GJA4P35212 333 aa17.66■□□□□ 0.42
SCAMP4-203ENST00000411971 LHX1P48742 406 aa17.66■□□□□ 0.42
SCAMP4-203ENST00000411971 CASP4P49662 377 aa17.66■□□□□ 0.42
SCAMP4-203ENST00000411971 GALK1P51570 392 aa17.66■□□□□ 0.42
SCAMP4-203ENST00000411971 CYP2J2P51589 502 aa17.66■□□□□ 0.42
SCAMP4-203ENST00000411971 RPL10AP62906 217 aaKnown RBP17.66■□□□□ 0.42
SCAMP4-203ENST00000411971 CUL4BQ13620 913 aa17.66■□□□□ 0.42
SCAMP4-203ENST00000411971 SIM2Q14190 667 aaPredicted RBP17.66■□□□□ 0.42
SCAMP4-203ENST00000411971 ZNF268Q14587 947 aaPredicted RBP17.66■□□□□ 0.42
SCAMP4-203ENST00000411971 SNRNP35Q16560 246 aaKnown RBP17.66■□□□□ 0.42
SCAMP4-203ENST00000411971 DUOXA2Q1HG44 320 aa17.66■□□□□ 0.42
SCAMP4-203ENST00000411971 C1orf228Q6PIY5 440 aa17.66■□□□□ 0.42
SCAMP4-203ENST00000411971 LONP2Q86WA8 852 aa17.66■□□□□ 0.42
SCAMP4-203ENST00000411971 WDR49Q8IV35 697 aa17.66■□□□□ 0.42
SCAMP4-203ENST00000411971 TTC16Q8NEE8 873 aa17.66■□□□□ 0.42
SCAMP4-203ENST00000411971 PCED1BQ96HM7 432 aa17.66■□□□□ 0.42
SCAMP4-203ENST00000411971 LINC00597Q9H2U6 94 aa17.66■□□□□ 0.42
SCAMP4-203ENST00000411971 THG1LQ9NWX6 298 aaKnown RBP17.66■□□□□ 0.42
SCAMP4-203ENST00000411971 USP18Q9UMW8 372 aa17.66■□□□□ 0.42
SCAMP4-203ENST00000411971 TNNC2P02585 160 aa17.65■□□□□ 0.42
SCAMP4-203ENST00000411971 DLATP10515 647 aaKnown RBP17.65■□□□□ 0.42
SCAMP4-203ENST00000411971 PCSK1P29120 753 aa17.65■□□□□ 0.42
SCAMP4-203ENST00000411971 MAGEA11P43364 429 aa17.65■□□□□ 0.42
SCAMP4-203ENST00000411971 CYP24A1Q07973 514 aa17.65■□□□□ 0.42
SCAMP4-203ENST00000411971 MTF1Q14872 753 aa17.65■□□□□ 0.42
SCAMP4-203ENST00000411971 GAB4Q2WGN9 574 aa17.65■□□□□ 0.42
SCAMP4-203ENST00000411971 EML3Q32P44 896 aa17.65■□□□□ 0.42
SCAMP4-203ENST00000411971 LAIR1Q6GTX8 287 aa17.65■□□□□ 0.42
SCAMP4-203ENST00000411971 UNC13DQ70J99 1090 aa17.65■□□□□ 0.42
SCAMP4-203ENST00000411971 DPH6Q7L8W6 267 aa17.65■□□□□ 0.42
SCAMP4-203ENST00000411971 FAM160A2Q8N612 972 aaPredicted RBP17.65■□□□□ 0.42
SCAMP4-203ENST00000411971 SPATA18Q8TC71 538 aa17.65■□□□□ 0.42
SCAMP4-203ENST00000411971 SNX21Q969T3 373 aa17.65■□□□□ 0.42
SCAMP4-203ENST00000411971 CCDC127Q96BQ5 260 aa17.65■□□□□ 0.42
SCAMP4-203ENST00000411971 FUBP3Q96I24 572 aaKnown RBP eCLIP17.65■□□□□ 0.42
SCAMP4-203ENST00000411971 ZNF396Q96N95 335 aaPredicted RBP17.65■□□□□ 0.42
SCAMP4-203ENST00000411971 CGRRF1Q99675 332 aa17.65■□□□□ 0.42
SCAMP4-203ENST00000411971 CUEDC2Q9H467 287 aa17.65■□□□□ 0.42
SCAMP4-203ENST00000411971 ECT2Q9H8V3 914 aa17.65■□□□□ 0.42
SCAMP4-203ENST00000411971 KIF9Q9HAQ2 790 aa17.65■□□□□ 0.42
SCAMP4-203ENST00000411971 SLC39A2Q9NP94 309 aa17.65■□□□□ 0.42
SCAMP4-203ENST00000411971 CDH9Q9ULB4 789 aa17.65■□□□□ 0.42
SCAMP4-203ENST00000411971 DCDC2BA2VCK2 349 aa17.64■□□□□ 0.41
SCAMP4-203ENST00000411971 CLDN5O00501 218 aa17.64■□□□□ 0.41
SCAMP4-203ENST00000411971 KIAA0391O15091 583 aaKnown RBP17.64■□□□□ 0.41
SCAMP4-203ENST00000411971 KLRC4O43908 158 aa17.64■□□□□ 0.41
SCAMP4-203ENST00000411971 GDF9O60383 454 aa17.64■□□□□ 0.41
SCAMP4-203ENST00000411971 RNF40O75150 1001 aa17.64■□□□□ 0.41
SCAMP4-203ENST00000411971 F13A1P00488 732 aa17.64■□□□□ 0.41
SCAMP4-203ENST00000411971 AFMP43652 599 aa17.64■□□□□ 0.41
SCAMP4-203ENST00000411971 MYL6P60660 151 aa17.64■□□□□ 0.41
SCAMP4-203ENST00000411971 FAM160A1Q05DH4 1040 aa17.64■□□□□ 0.41
SCAMP4-203ENST00000411971 MYO1EQ12965 1108 aa17.64■□□□□ 0.41
SCAMP4-203ENST00000411971 PPP2R5DQ14738 602 aa17.64■□□□□ 0.41
SCAMP4-203ENST00000411971 PSMD6Q15008 389 aa17.64■□□□□ 0.41
SCAMP4-203ENST00000411971 MDH1BQ5I0G3 518 aa17.64■□□□□ 0.41
SCAMP4-203ENST00000411971 WDR5BQ86VZ2 330 aa17.64■□□□□ 0.41
SCAMP4-203ENST00000411971 IQUBQ8NA54 791 aa17.64■□□□□ 0.41
SCAMP4-203ENST00000411971 SH3RF2Q8TEC5 729 aa17.64■□□□□ 0.41
SCAMP4-203ENST00000411971 RNF38Q9H0F5 515 aa17.64■□□□□ 0.41
SCAMP4-203ENST00000411971 XYLT2Q9H1B5 865 aa17.64■□□□□ 0.41
SCAMP4-203ENST00000411971 MAGEC2Q9UBF1 373 aaPredicted RBP17.64■□□□□ 0.41
SCAMP4-203ENST00000411971 GMEB2Q9UKD1 530 aa17.64■□□□□ 0.41
SCAMP4-203ENST00000411971 ABCA7Q8IZY2 2146 aa17.63■□□□□ 0.41
SCAMP4-203ENST00000411971 MYH10P35580 1976 aa17.63■□□□□ 0.41
SCAMP4-203ENST00000411971 SOBPA7XYQ1 873 aa17.63■□□□□ 0.41
SCAMP4-203ENST00000411971 SCAMP3O14828 347 aaKnown RBP17.63■□□□□ 0.41
SCAMP4-203ENST00000411971 RETP07949 1114 aa17.63■□□□□ 0.41
SCAMP4-203ENST00000411971 ZSCAN22P10073 491 aaPredicted RBP17.63■□□□□ 0.41
SCAMP4-203ENST00000411971 HOXA6P31267 233 aa17.63■□□□□ 0.41
SCAMP4-203ENST00000411971 CYP27A1Q02318 531 aa17.63■□□□□ 0.41
SCAMP4-203ENST00000411971 MESP2Q0VG99 397 aa17.63■□□□□ 0.41
SCAMP4-203ENST00000411971 SURF1Q15526 300 aa17.63■□□□□ 0.41
SCAMP4-203ENST00000411971 CCDC6Q16204 474 aa17.63■□□□□ 0.41
SCAMP4-203ENST00000411971 RESP18Q5W5W9 173 aa17.63■□□□□ 0.41
SCAMP4-203ENST00000411971 SFTPA1Q8IWL2 248 aa17.63■□□□□ 0.41
SCAMP4-203ENST00000411971 SYNPOQ8N3V7 929 aa17.63■□□□□ 0.41
SCAMP4-203ENST00000411971 SPRYD3Q8NCJ5 442 aa17.63■□□□□ 0.41
SCAMP4-203ENST00000411971 OSCP1Q8WVF1 389 aa17.63■□□□□ 0.41
SCAMP4-203ENST00000411971 MMS19Q96T76 1030 aa17.63■□□□□ 0.41
SCAMP4-203ENST00000411971 ZNF518BQ9C0D4 1074 aa17.63■□□□□ 0.41
SCAMP4-203ENST00000411971 SEMA4GQ9NTN9 838 aa17.63■□□□□ 0.41
SCAMP4-203ENST00000411971 DUS2Q9NX74 493 aaKnown RBP17.63■□□□□ 0.41
SCAMP4-203ENST00000411971 UXTQ9UBK9 157 aaPredicted RBP17.63■□□□□ 0.41
SCAMP4-203ENST00000411971 ZMYM5Q9UJ78 669 aa17.63■□□□□ 0.41
SCAMP4-203ENST00000411971 TRAV19A0A0A6YYK7 116 aa17.62■□□□□ 0.41
SCAMP4-203ENST00000411971 F8VP50 259 aa17.62■□□□□ 0.41
SCAMP4-203ENST00000411971 CKMP06732 381 aa17.62■□□□□ 0.41
SCAMP4-203ENST00000411971 USP17L7P0C7H9 530 aa17.62■□□□□ 0.41
SCAMP4-203ENST00000411971 TNNI1P19237 187 aa17.62■□□□□ 0.41
SCAMP4-203ENST00000411971 CDH8P55286 799 aa17.62■□□□□ 0.41
SCAMP4-203ENST00000411971 BMT2Q1RMZ1 405 aa17.62■□□□□ 0.41
SCAMP4-203ENST00000411971 XXYLT1Q8NBI6 393 aa17.62■□□□□ 0.41
SCAMP4-203ENST00000411971 KIAA0895Q8NCT3 520 aa17.62■□□□□ 0.41
SCAMP4-203ENST00000411971 MYCBPAPQ8TBZ2 947 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms