RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 VPS50Q96JG6 964 aa14.33□□□□□ -0.12
RUNX3-203ENST00000399916 DMTF1Q9Y222 760 aa14.33□□□□□ -0.12
RUNX3-203ENST00000399916 TMED5Q9Y3A6 229 aa14.33□□□□□ -0.12
RUNX3-203ENST00000399916 AP4S1Q9Y587 144 aa14.33□□□□□ -0.12
RUNX3-203ENST00000399916 PSMD11O00231 422 aa14.33□□□□□ -0.12
RUNX3-203ENST00000399916 OXSR1O95747 527 aaPredicted RBP14.33□□□□□ -0.12
RUNX3-203ENST00000399916 NUDT17P0C025 328 aa14.33□□□□□ -0.12
RUNX3-203ENST00000399916 RASA1P20936 1047 aa14.33□□□□□ -0.12
RUNX3-203ENST00000399916 FOXN2P32314 431 aa14.33□□□□□ -0.12
RUNX3-203ENST00000399916 SYDE2Q5VT97 1194 aa14.33□□□□□ -0.12
RUNX3-203ENST00000399916 RAPH1Q70E73 1250 aa14.33□□□□□ -0.12
RUNX3-203ENST00000399916 KCNK18Q7Z418 384 aa14.33□□□□□ -0.12
RUNX3-203ENST00000399916 SLC5A5Q92911 643 aa14.33□□□□□ -0.12
RUNX3-203ENST00000399916 TAS2R1Q9NYW7 299 aa14.33□□□□□ -0.12
RUNX3-203ENST00000399916 NINJ2Q9NZG7 142 aa14.33□□□□□ -0.12
RUNX3-203ENST00000399916 SOX13Q9UN79 622 aa14.33□□□□□ -0.12
RUNX3-203ENST00000399916 MYO3BQ8WXR4 1341 aa14.33□□□□□ -0.12
RUNX3-203ENST00000399916 ASNA1O43681 348 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 APOA1P02647 267 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 PSMC2P35998 433 aaKnown RBP14.32□□□□□ -0.12
RUNX3-203ENST00000399916 STT3AP46977 705 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 CAV1Q03135 178 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 ITGA9Q13797 1035 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 NKX1-1Q15270 411 aaPredicted RBP14.32□□□□□ -0.12
RUNX3-203ENST00000399916 C6orf52Q5T4I8 152 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 XKR5Q6UX68 686 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 DENND5BQ6ZUT9 1274 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 CLEC10AQ8IUN9 316 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 SKA1Q96BD8 255 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 CALN1Q9BXU9 219 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 SNX5Q9Y5X3 404 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 ARFGEF2Q9Y6D5 1785 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 ZNF839A8K0R7 811 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 DNALI1O14645 258 aaPredicted RBP14.32□□□□□ -0.12
RUNX3-203ENST00000399916 PJA2O43164 708 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 SLC26A4O43511 780 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 SMARCA1P28370 1054 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 GCLMP48507 274 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 WASHC5Q12768 1159 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 PACS1Q6VY07 963 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 CYFIP1Q7L576 1253 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 NT5DC3Q86UY8 548 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 DHRS1Q96LJ7 313 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 LRRC4CQ9HCJ2 640 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 PCDHGA3Q9Y5H0 932 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 RNASEH1O60930 286 aaKnown RBP14.32□□□□□ -0.12
RUNX3-203ENST00000399916 RXRGP48443 463 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 PKNOX1P55347 436 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 PTK7Q13308 1070 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 ACAD11Q709F0 780 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 SMYD1Q8NB12 490 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 RBM15BQ8NDT2 890 aaKnown RBP14.32□□□□□ -0.12
RUNX3-203ENST00000399916 CEP19Q96LK0 163 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 RNF38Q9H0F5 515 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 RPAP3Q9H6T3 665 aaPredicted RBP14.32□□□□□ -0.12
RUNX3-203ENST00000399916 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.32□□□□□ -0.12
RUNX3-203ENST00000399916 MYH2Q9UKX2 1941 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 TNPO2O14787 897 aaKnown RBP14.32□□□□□ -0.12
RUNX3-203ENST00000399916 TLR2O60603 784 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 CD19P15391 556 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 UBE3AQ05086 875 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 USP17L6PQ6QN14 398 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 PARP8Q8N3A8 854 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 NMUR2Q9GZQ4 415 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 BLOC1S4Q9NUP1 217 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 PPM1HQ9ULR3 514 aa14.32□□□□□ -0.12
RUNX3-203ENST00000399916 MYH13Q9UKX3 1938 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 GNGT2O14610 69 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 USP12O75317 370 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 GABBR2O75899 941 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 GJB6O95452 261 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 PENKP01210 267 aaPredicted RBP14.31□□□□□ -0.12
RUNX3-203ENST00000399916 MARCKSL1P49006 195 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 CDK16Q00536 496 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 PDCD4Q53EL6 469 aaKnown RBP14.31□□□□□ -0.12
RUNX3-203ENST00000399916 FSCBQ5H9T9 825 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 C12orf60Q5U649 245 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 METTL21CQ5VZV1 264 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 PCNX4Q63HM2 1172 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 C1orf131Q8NDD1 294 aaKnown RBP14.31□□□□□ -0.12
RUNX3-203ENST00000399916 ANKRD36BP1Q96IX9 119 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 SAC3D1A6NKF1 404 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 GOLGA8JA6NMD2 632 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 CCRL2O00421 344 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 KCNA4P22459 653 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 STAT3P40763 770 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 WDR44Q5JSH3 913 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 HTRA1Q92743 480 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 CEP95Q96GE4 821 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 GOLGA8OA6NCC3 632 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 E9PBE3 544 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 GOLGA8NF8WBI6 632 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 SOX5P35711 763 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 YARSP54577 528 aaKnown RBP14.31□□□□□ -0.12
RUNX3-203ENST00000399916 EPC2Q52LR7 807 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 OGFOD2Q6N063 350 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 SCYL2Q6P3W7 929 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 DEPDC7Q96QD5 511 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 KIAA1586Q9HCI6 787 aa14.31□□□□□ -0.12
RUNX3-203ENST00000399916 SEPT3Q9UH03 358 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms