RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 RFC5P40937 340 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 IGBP1P78318 339 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 NEDD9Q14511 834 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 SPARCL1Q14515 664 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 RNF43Q68DV7 783 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 TRNP1Q6NT89 227 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 OTOAQ7RTW8 1153 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 XYLT1Q86Y38 959 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 CCDC33Q8N5R6 958 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 NAT8LQ8N9F0 302 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 C1orf127Q8N9H9 656 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 DNERQ8NFT8 737 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 NSMCE1Q8WV22 266 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 ELOVL4Q9GZR5 314 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 SYNCQ9H7C4 482 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 SNCAIPQ9Y6H5 919 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 BRCA2P51587 3418 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 SIGLEC16A6NMB1 481 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 GPR25O00155 361 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 UNC5CO95185 931 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 T-ENOLP0DO92 83 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 BASP1P80723 227 aaKnown RBP15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 VGLL4Q14135 290 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 CDO1Q16878 200 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 C15orf59Q2T9L4 293 aaPredicted RBP15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 LBX2Q6XYB7 198 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 VSIG1Q86XK7 387 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 RFX6Q8HWS3 928 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 KCTD6Q8NC69 237 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 MAGEC3Q8TD91 643 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 ZNF75CPQ92670 426 aaPredicted RBP15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 MYCBPQ99417 103 aaPredicted RBP15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 PAFAH2Q99487 392 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 NPHS2Q9NP85 383 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 RNF19AQ9NV58 838 aa15.24■□□□□ 0.03
CCDC144A-205ENST00000399264 PRPF4O43172 522 aaKnown RBP eCLIP15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 EDF1O60869 148 aaKnown RBP15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 FAM155BO75949 473 aa15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 CDH5P33151 784 aaPredicted RBP15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 PDK4Q16654 411 aa15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 ATF7IP2Q5U623 682 aa15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 HHATQ5VTY9 493 aa15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 TDRPQ86YL5 185 aa15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 AGGF1Q8N302 714 aaeCLIP15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 SLC4A11Q8NBS3 891 aa15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 KCNV2Q8TDN2 545 aa15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 TCP10LQ8TDR4 215 aa15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 LRRC8CQ8TDW0 803 aa15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 RSAD2Q8WXG1 361 aa15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 L3MBTL3Q96JM7 780 aaPredicted RBP15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 LBHD1Q9BQE6 289 aaPredicted RBP15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 TRIM56Q9BRZ2 755 aaKnown RBP15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 CXCL16Q9H2A7 254 aa15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 RGS17Q9UGC6 210 aaPredicted RBP15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 KCNG1Q9UIX4 513 aa15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 PCDHGC3Q9UN70 934 aa15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 SHOC2Q9UQ13 582 aa15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 C2orf71A6NGG8 1288 aa15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 DIAPH2O60879 1101 aa15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 USP2O75604 605 aaPredicted RBP15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 ITGB3P05106 788 aa15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 SLC8A1P32418 973 aa15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 GEMIN4P57678 1058 aaKnown RBP15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 MKRN3Q13064 507 aaKnown RBP15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 FAXCQ5TGI0 409 aa15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 FBXO16Q8IX29 292 aaPredicted RBP15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 NIPA2Q8N8Q9 360 aa15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 GIMAP7Q8NHV1 300 aa15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 TTC25Q96NG3 672 aa15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 GPR20Q99678 358 aa15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 MAGEB5Q9BZ81 275 aa15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 YY1AP1Q9H869 796 aa15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 PTPRHQ9HD43 1115 aa15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 PDGFCQ9NRA1 345 aa15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 GPATCH2LQ9NWQ4 482 aa15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 PSMC3IPQ9P2W1 217 aaPredicted RBP15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 NKX1-2Q9UD57 310 aaPredicted RBP15.23■□□□□ 0.03
CCDC144A-205ENST00000399264 EIF4E1BA6NMX2 242 aaKnown RBP15.22■□□□□ 0.03
CCDC144A-205ENST00000399264 SOCS7O14512 581 aa15.22■□□□□ 0.03
CCDC144A-205ENST00000399264 MAGEB2O15479 319 aa15.22■□□□□ 0.03
CCDC144A-205ENST00000399264 RBP3P10745 1247 aa15.22■□□□□ 0.03
CCDC144A-205ENST00000399264 CCNB1P14635 433 aa15.22■□□□□ 0.03
CCDC144A-205ENST00000399264 ABCD1P33897 745 aa15.22■□□□□ 0.03
CCDC144A-205ENST00000399264 RIPK1Q13546 671 aa15.22■□□□□ 0.03
CCDC144A-205ENST00000399264 EFHC2Q5JST6 749 aa15.22■□□□□ 0.03
CCDC144A-205ENST00000399264 MAP1SQ66K74 1059 aaPredicted RBP15.22■□□□□ 0.03
CCDC144A-205ENST00000399264 CDCA2Q69YH5 1023 aaPredicted RBP15.22■□□□□ 0.03
CCDC144A-205ENST00000399264 TLDC1Q6P9B6 456 aa15.22■□□□□ 0.03
CCDC144A-205ENST00000399264 METTL7BQ6UX53 244 aa15.22■□□□□ 0.03
CCDC144A-205ENST00000399264 RIBC1Q8N443 379 aaPredicted RBP15.22■□□□□ 0.03
CCDC144A-205ENST00000399264 ZNF276Q8N554 614 aa15.22■□□□□ 0.03
CCDC144A-205ENST00000399264 C12orf29Q8N999 325 aa15.22■□□□□ 0.03
CCDC144A-205ENST00000399264 RFWD2Q8NHY2 731 aa15.22■□□□□ 0.03
CCDC144A-205ENST00000399264 PRR11Q96HE9 360 aaPredicted RBP15.22■□□□□ 0.03
CCDC144A-205ENST00000399264 CPB2Q96IY4 423 aa15.22■□□□□ 0.03
CCDC144A-205ENST00000399264 CDT1Q9H211 546 aa15.22■□□□□ 0.03
CCDC144A-205ENST00000399264 DDX56Q9NY93 547 aaKnown RBP15.22■□□□□ 0.03
CCDC144A-205ENST00000399264 KANSL3Q9P2N6 904 aa15.22■□□□□ 0.03
CCDC144A-205ENST00000399264 XPO7Q9UIA9 1087 aaKnown RBP15.22■□□□□ 0.03
CCDC144A-205ENST00000399264 STARD13Q9Y3M8 1113 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms