RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 DDX56Q9NY93 547 aaKnown RBP16.82■□□□□ 0.28
PDZD4-202ENST00000393758 BHMG1C9JSJ3 638 aaPredicted RBP16.82■□□□□ 0.28
PDZD4-202ENST00000393758 C2CD2LO14523 706 aa16.82■□□□□ 0.28
PDZD4-202ENST00000393758 GSC2O15499 205 aa16.82■□□□□ 0.28
PDZD4-202ENST00000393758 TRPA1O75762 1119 aa16.82■□□□□ 0.28
PDZD4-202ENST00000393758 CCNE2O96020 404 aa16.82■□□□□ 0.28
PDZD4-202ENST00000393758 UNGP13051 313 aaPredicted RBP16.82■□□□□ 0.28
PDZD4-202ENST00000393758 GM2AP17900 193 aa16.82■□□□□ 0.28
PDZD4-202ENST00000393758 RANBP1P43487 201 aa16.82■□□□□ 0.28
PDZD4-202ENST00000393758 IGBP1P78318 339 aa16.82■□□□□ 0.28
PDZD4-202ENST00000393758 ACSBG2Q5FVE4 666 aa16.82■□□□□ 0.28
PDZD4-202ENST00000393758 NPNTQ6UXI9 565 aa16.82■□□□□ 0.28
PDZD4-202ENST00000393758 C7orf43Q8WVR3 580 aa16.82■□□□□ 0.28
PDZD4-202ENST00000393758 OXNAD1Q96HP4 312 aaPredicted RBP16.82■□□□□ 0.28
PDZD4-202ENST00000393758 NMUR2Q9GZQ4 415 aa16.82■□□□□ 0.28
PDZD4-202ENST00000393758 SHOC2Q9UQ13 582 aa16.82■□□□□ 0.28
PDZD4-202ENST00000393758 MYPNQ86TC9 1320 aa16.82■□□□□ 0.28
PDZD4-202ENST00000393758 RPL22P35268 128 aaKnown RBP16.81■□□□□ 0.28
PDZD4-202ENST00000393758 MRPS9P82933 396 aaKnown RBP16.81■□□□□ 0.28
PDZD4-202ENST00000393758 ACVR2BQ13705 512 aa16.81■□□□□ 0.28
PDZD4-202ENST00000393758 PIGHQ14442 188 aaPredicted RBP16.81■□□□□ 0.28
PDZD4-202ENST00000393758 EMC2Q15006 297 aa16.81■□□□□ 0.28
PDZD4-202ENST00000393758 ASAP3Q8TDY4 903 aa16.81■□□□□ 0.28
PDZD4-202ENST00000393758 PRR11Q96HE9 360 aaPredicted RBP16.81■□□□□ 0.28
PDZD4-202ENST00000393758 ANKEF1Q9NU02 776 aa16.81■□□□□ 0.28
PDZD4-202ENST00000393758 GRID1Q9ULK0 1009 aa16.81■□□□□ 0.28
PDZD4-202ENST00000393758 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.81■□□□□ 0.28
PDZD4-202ENST00000393758 LINGO3P0C6S8 592 aa16.81■□□□□ 0.28
PDZD4-202ENST00000393758 RFC1P35251 1148 aaPredicted RBP16.81■□□□□ 0.28
PDZD4-202ENST00000393758 MMP14P50281 582 aa16.81■□□□□ 0.28
PDZD4-202ENST00000393758 GDF10P55107 478 aa16.81■□□□□ 0.28
PDZD4-202ENST00000393758 CCNJLQ8IV13 435 aa16.81■□□□□ 0.28
PDZD4-202ENST00000393758 ALOX15BO15296 676 aa16.81■□□□□ 0.28
PDZD4-202ENST00000393758 ETS2P15036 469 aa16.81■□□□□ 0.28
PDZD4-202ENST00000393758 RGS7P49802 495 aa16.81■□□□□ 0.28
PDZD4-202ENST00000393758 HIRAP54198 1017 aaPredicted RBP16.81■□□□□ 0.28
PDZD4-202ENST00000393758 NXNQ6DKJ4 435 aa16.81■□□□□ 0.28
PDZD4-202ENST00000393758 SLFN12LQ6IEE8 588 aa16.81■□□□□ 0.28
PDZD4-202ENST00000393758 RINLQ6ZS11 566 aa16.81■□□□□ 0.28
PDZD4-202ENST00000393758 WDR75Q8IWA0 830 aaKnown RBP16.81■□□□□ 0.28
PDZD4-202ENST00000393758 UNC45BQ8IWX7 931 aa16.81■□□□□ 0.28
PDZD4-202ENST00000393758 SCUBE1Q8IWY4 988 aa16.81■□□□□ 0.28
PDZD4-202ENST00000393758 UBA3Q8TBC4 463 aa16.81■□□□□ 0.28
PDZD4-202ENST00000393758 DDX1Q92499 740 aaKnown RBP16.81■□□□□ 0.28
PDZD4-202ENST00000393758 ALKBH8Q96BT7 664 aaKnown RBP16.81■□□□□ 0.28
PDZD4-202ENST00000393758 PDCD2LQ9BRP1 358 aa16.81■□□□□ 0.28
PDZD4-202ENST00000393758 WWP1Q9H0M0 922 aa16.81■□□□□ 0.28
PDZD4-202ENST00000393758 IRAK4Q9NWZ3 460 aa16.81■□□□□ 0.28
PDZD4-202ENST00000393758 M0QYV0 167 aa16.8■□□□□ 0.28
PDZD4-202ENST00000393758 CAP2P40123 477 aa16.8■□□□□ 0.28
PDZD4-202ENST00000393758 CDK16Q00536 496 aa16.8■□□□□ 0.28
PDZD4-202ENST00000393758 MON1BQ7L1V2 547 aa16.8■□□□□ 0.28
PDZD4-202ENST00000393758 ANKS1BQ7Z6G8 1248 aa16.8■□□□□ 0.28
PDZD4-202ENST00000393758 ZNF516Q92618 1163 aa16.8■□□□□ 0.28
PDZD4-202ENST00000393758 SLC7A6OSQ96CW6 309 aaPredicted RBP16.8■□□□□ 0.28
PDZD4-202ENST00000393758 SRPK1Q96SB4 655 aaKnown RBP16.8■□□□□ 0.28
PDZD4-202ENST00000393758 ZNF395Q9H8N7 513 aaPredicted RBP16.8■□□□□ 0.28
PDZD4-202ENST00000393758 CYP26B1Q9NR63 512 aa16.8■□□□□ 0.28
PDZD4-202ENST00000393758 ZNF277Q9NRM2 450 aaPredicted RBP16.8■□□□□ 0.28
PDZD4-202ENST00000393758 CISHQ9NSE2 258 aa16.8■□□□□ 0.28
PDZD4-202ENST00000393758 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.8■□□□□ 0.28
PDZD4-202ENST00000393758 PACSIN3Q9UKS6 424 aa16.8■□□□□ 0.28
PDZD4-202ENST00000393758 NAV1Q8NEY1 1877 aa16.8■□□□□ 0.28
PDZD4-202ENST00000393758 MAPTP10636 758 aaKnown RBP16.8■□□□□ 0.28
PDZD4-202ENST00000393758 TUBP50607 506 aa16.8■□□□□ 0.28
PDZD4-202ENST00000393758 ASPHQ12797 758 aa16.8■□□□□ 0.28
PDZD4-202ENST00000393758 PGM5Q15124 567 aa16.8■□□□□ 0.28
PDZD4-202ENST00000393758 OLIG1Q8TAK6 271 aa16.8■□□□□ 0.28
PDZD4-202ENST00000393758 ATP2A3Q93084 1043 aa16.8■□□□□ 0.28
PDZD4-202ENST00000393758 ATG4CQ96DT6 458 aa16.8■□□□□ 0.28
PDZD4-202ENST00000393758 GOLGB1Q14789 3259 aaKnown RBP16.8■□□□□ 0.28
PDZD4-202ENST00000393758 KRT38O76015 456 aa16.8■□□□□ 0.28
PDZD4-202ENST00000393758 PDE5AO76074 875 aa16.8■□□□□ 0.28
PDZD4-202ENST00000393758 ABHD2P08910 425 aa16.8■□□□□ 0.28
PDZD4-202ENST00000393758 BCAR1P56945 870 aa16.8■□□□□ 0.28
PDZD4-202ENST00000393758 CCDC15Q0P6D6 951 aa16.8■□□□□ 0.28
PDZD4-202ENST00000393758 WDR60Q8WVS4 1066 aa16.8■□□□□ 0.28
PDZD4-202ENST00000393758 PYDC1Q8WXC3 89 aa16.8■□□□□ 0.28
PDZD4-202ENST00000393758 PTPRN2Q92932 1015 aa16.8■□□□□ 0.28
PDZD4-202ENST00000393758 VPS11Q9H270 941 aa16.8■□□□□ 0.28
PDZD4-202ENST00000393758 RPAP3Q9H6T3 665 aaPredicted RBP16.8■□□□□ 0.28
PDZD4-202ENST00000393758 APOBEC2Q9Y235 224 aaKnown RBP16.8■□□□□ 0.28
PDZD4-202ENST00000393758 HNRNPCL1O60812 293 aaKnown RBP16.79■□□□□ 0.28
PDZD4-202ENST00000393758 SP100P23497 879 aaPredicted RBP16.79■□□□□ 0.28
PDZD4-202ENST00000393758 CDH8P55286 799 aa16.79■□□□□ 0.28
PDZD4-202ENST00000393758 STX3Q13277 289 aa16.79■□□□□ 0.28
PDZD4-202ENST00000393758 HIC1Q14526 733 aa16.79■□□□□ 0.28
PDZD4-202ENST00000393758 TRIP10Q15642 601 aa16.79■□□□□ 0.28
PDZD4-202ENST00000393758 ST13P4Q8IZP2 240 aaPredicted RBP16.79■□□□□ 0.28
PDZD4-202ENST00000393758 C7orf31Q8N865 590 aa16.79■□□□□ 0.28
PDZD4-202ENST00000393758 VCX3BQ9H321 246 aa16.79■□□□□ 0.28
PDZD4-202ENST00000393758 TCRBV7S3A2A0A539 114 aa16.79■□□□□ 0.28
PDZD4-202ENST00000393758 CCDC189A1A4V9 331 aa16.79■□□□□ 0.28
PDZD4-202ENST00000393758 TBX10O75333 385 aa16.79■□□□□ 0.28
PDZD4-202ENST00000393758 LDHAP00338 332 aaKnown RBP16.79■□□□□ 0.28
PDZD4-202ENST00000393758 CD48P09326 243 aa16.79■□□□□ 0.28
PDZD4-202ENST00000393758 C1QBPQ07021 282 aaKnown RBP16.79■□□□□ 0.28
PDZD4-202ENST00000393758 MMRN1Q13201 1228 aa16.79■□□□□ 0.28
PDZD4-202ENST00000393758 MSS51Q4VC12 460 aa16.79■□□□□ 0.28
PDZD4-202ENST00000393758 TRIM42Q8IWZ5 723 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms