RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 POLE3Q9NRF9 147 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 MRPL39Q9NYK5 338 aaKnown RBP16.75■□□□□ 0.27
SHANK1-204ENST00000391814 SNPHO15079 494 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 ETS2P15036 469 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 ROR2Q01974 943 aaKnown RBP16.75■□□□□ 0.27
SHANK1-204ENST00000391814 PDIA5Q14554 519 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 PI4K2AQ9BTU6 479 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 RIC8BQ9NVN3 520 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 CEP170Q5SW79 1584 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 TRIM43BA6NCK2 446 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 CCDC130P13994 396 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 SLC1A6P48664 564 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 ACOT2P49753 483 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 NFX1Q12986 1120 aaKnown RBP16.75■□□□□ 0.27
SHANK1-204ENST00000391814 SEPT1Q8WYJ6 367 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 VPS33BQ9H267 617 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 EPB41L4AQ9HCS5 686 aaPredicted RBP16.75■□□□□ 0.27
SHANK1-204ENST00000391814 DCP1AQ9NPI6 582 aaPredicted RBP16.75■□□□□ 0.27
SHANK1-204ENST00000391814 KLHL20Q9Y2M5 609 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.75■□□□□ 0.27
SHANK1-204ENST00000391814 A0A0G2JLW4 131 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 DDHD2O94830 711 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 SEL1L3Q68CR1 1132 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 TAF2Q6P1X5 1199 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 CCDC80Q76M96 950 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 DNAAF5Q86Y56 855 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 ATPAF2Q8N5M1 289 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 IGDCC4Q8TDY8 1250 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 TBC1D22BQ9NU19 505 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 SGPL1O95470 568 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 PHKA2P46019 1235 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 PTDSS1P48651 473 aaKnown RBP16.75■□□□□ 0.27
SHANK1-204ENST00000391814 CHRNB3Q05901 458 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 ALX1Q15699 326 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 ELMSAN1Q6PJG2 1045 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 FEZF2Q8TBJ5 459 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 MCRS1Q96EZ8 462 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 DEPDC7Q96QD5 511 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 CEP44Q9C0F1 390 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 SENP2Q9HC62 589 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 ARHGEF40Q8TER5 1519 aa16.75■□□□□ 0.27
SHANK1-204ENST00000391814 KLHL18O94889 574 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 GH2P01242 217 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 RGS21Q2M5E4 152 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 SUSD4Q5VX71 490 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 RMDN3Q96TC7 470 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 COPS7BQ9H9Q2 264 aaPredicted RBP16.74■□□□□ 0.27
SHANK1-204ENST00000391814 PON1P27169 355 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 GLRBP48167 497 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 PSMC5P62195 406 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 SNRNP35Q16560 246 aaKnown RBP16.74■□□□□ 0.27
SHANK1-204ENST00000391814 RNF219Q5W0B1 726 aaPredicted RBP16.74■□□□□ 0.27
SHANK1-204ENST00000391814 SYNDIG1Q9H7V2 258 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 A0A087X0T9 212 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 FAM228BP0C875 321 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 TCF3P15923 654 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 CCNA1P78396 465 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 PCNX4Q63HM2 1172 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 ACAD10Q6JQN1 1059 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 RBM44Q6ZP01 1051 aaKnown RBP16.74■□□□□ 0.27
SHANK1-204ENST00000391814 ASIC4Q96FT7 647 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 SEMA4AQ9H3S1 761 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 FAM49BQ9NUQ9 324 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 COPG2Q9UBF2 871 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 HEG1Q9ULI3 1381 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 SNAP23O00161 211 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 SLC16A1P53985 500 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 MTTPP55157 894 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 TRIQKQ629K1 86 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 TMC3Q7Z5M5 1100 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 ELOA2Q8IYF1 753 aaPredicted RBP16.74■□□□□ 0.27
SHANK1-204ENST00000391814 ZNF669Q96BR6 464 aaPredicted RBP16.74■□□□□ 0.27
SHANK1-204ENST00000391814 CLEC4MQ9H2X3 399 aaPredicted RBP16.74■□□□□ 0.27
SHANK1-204ENST00000391814 SHROOM2Q13796 1616 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 TSPAN9O75954 239 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 PEX5P50542 639 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 RPL10AP62906 217 aaKnown RBP16.74■□□□□ 0.27
SHANK1-204ENST00000391814 SFSWAPQ12872 951 aaKnown RBP16.74■□□□□ 0.27
SHANK1-204ENST00000391814 DUOXA2Q1HG44 320 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 ARMC3Q5W041 872 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 TBX22Q9Y458 520 aa16.74■□□□□ 0.27
SHANK1-204ENST00000391814 ADGRL3Q9HAR2 1447 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 FCHO1O14526 889 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 SERPIND1P05546 499 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 IPMKQ8NFU5 416 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 OSBPL10Q9BXB5 764 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 AP5M1Q9H0R1 490 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 TRAF3Q13114 568 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 TMEM179Q6ZVK1 233 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 CCDC33Q8N5R6 958 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 FBXO25Q8TCJ0 367 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 KIF12Q96FN5 646 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 C1orf50Q9BV19 199 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 ROGDIQ9GZN7 287 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 IL25Q9H293 177 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 TAF6LQ9Y6J9 622 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 PIPSLA2A3N6 862 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 NDUFS3O75489 264 aa16.73■□□□□ 0.27
SHANK1-204ENST00000391814 TFRCP02786 760 aaKnown RBP16.73■□□□□ 0.27
SHANK1-204ENST00000391814 PRDX5P30044 214 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms