RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 GRAMD1BQ3KR37 738 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 FBXO47Q5MNV8 452 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 CACHD1Q5VU97 1274 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 RANBP17Q9H2T7 1088 aaKnown RBP7.45□□□□□ -1.22
CCDC171-201ENST00000380701 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.45□□□□□ -1.22
CCDC171-201ENST00000380701 EIF3LQ9Y262 564 aaKnown RBP7.45□□□□□ -1.22
CCDC171-201ENST00000380701 ITGB3P05106 788 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 ATP5BP06576 529 aaKnown RBP7.45□□□□□ -1.22
CCDC171-201ENST00000380701 CKBP12277 381 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 SERPINB10P48595 397 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 GALCP54803 685 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 ACAP1Q15027 740 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 ACAD10Q6JQN1 1059 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 ZC3H18Q86VM9 953 aaKnown RBP7.45□□□□□ -1.22
CCDC171-201ENST00000380701 LRRC49Q8IUZ0 686 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 MYO1HQ8N1T3 1032 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 STARD8Q92502 1023 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 ELMO2Q96JJ3 720 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 MCEEQ96PE7 176 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 VAT1Q99536 393 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 RMND5AQ9H871 391 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 VIPAS39Q9H9C1 493 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 PYCARDQ9ULZ3 195 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 DIP2BQ9P265 1576 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 MST1RQ04912 1400 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 MYMKA6NI61 221 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 QSOX1O00391 747 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 EIF3HO15372 352 aaKnown RBP eCLIP7.45□□□□□ -1.22
CCDC171-201ENST00000380701 RHOBTB1O94844 696 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 PSEN2P49810 448 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 PRKAA2P54646 552 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 SESN2P58004 480 aaPredicted RBP7.45□□□□□ -1.22
CCDC171-201ENST00000380701 MFSD10Q14728 455 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 PPM1LQ5SGD2 360 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 FAM117BQ6P1L5 589 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 C17orf53Q8N3J3 647 aaPredicted RBP7.45□□□□□ -1.22
CCDC171-201ENST00000380701 MSL3Q8N5Y2 521 aaKnown RBP7.45□□□□□ -1.22
CCDC171-201ENST00000380701 VCPIP1Q96JH7 1222 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 YIPF2Q9BWQ6 316 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 RTFDC1Q9BY42 306 aaPredicted RBP7.45□□□□□ -1.22
CCDC171-201ENST00000380701 MRPL1Q9BYD6 325 aaKnown RBP7.45□□□□□ -1.22
CCDC171-201ENST00000380701 PDGFCQ9NRA1 345 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 NOP53Q9NZM5 478 aaKnown RBP7.45□□□□□ -1.22
CCDC171-201ENST00000380701 H2AFY2Q9P0M6 372 aaPredicted RBP7.45□□□□□ -1.22
CCDC171-201ENST00000380701 SPATA31D1Q6ZQQ2 1576 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 RBP3P10745 1247 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 GUCY1A2P33402 732 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 RGS7P49802 495 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 LIG3P49916 1009 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 CACNB2Q08289 660 aaPredicted RBP7.45□□□□□ -1.22
CCDC171-201ENST00000380701 TROAPQ12815 778 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 RIOX2Q8IUF8 465 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 LRRC71Q8N4P6 559 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 SYTL5Q8TDW5 730 aaPredicted RBP7.45□□□□□ -1.22
CCDC171-201ENST00000380701 STAMBPL1Q96FJ0 436 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 RIOX1Q9H6W3 641 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 SNX12Q9UMY4 172 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 RIMBP3CA6NJZ7 1639 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 RIMBP3BA6NNM3 1639 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 RIMBP3Q9UFD9 1639 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 GAKO14976 1311 aa7.45□□□□□ -1.22
CCDC171-201ENST00000380701 H3BMM5 538 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 HMBSP08397 361 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 RBP1P09455 135 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 PAEPP09466 180 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 ITGB6P18564 788 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 VCPP55072 806 aaKnown RBP7.44□□□□□ -1.22
CCDC171-201ENST00000380701 RHOAP61586 193 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 GRIK4Q16099 956 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 DEFB115Q30KQ5 88 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 KCNB2Q92953 911 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 GFM2Q969S9 779 aaKnown RBP7.44□□□□□ -1.22
CCDC171-201ENST00000380701 REPS1Q96D71 796 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 MAGEB10Q96LZ2 347 aaPredicted RBP7.44□□□□□ -1.22
CCDC171-201ENST00000380701 SH3GL1Q99961 368 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 CLPBQ9H078 707 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 TBC1D12O60347 775 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 GUCY1B2O75343 617 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 APRTP07741 180 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 IRF1P10914 325 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 RXRGP48443 463 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 STX3Q13277 289 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 SGCGQ13326 291 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 ZRANB3Q5FWF4 1079 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 ZBTB41Q5SVQ8 909 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 KLHDC7AQ5VTJ3 777 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 TTC39BQ5VTQ0 682 aaPredicted RBP7.44□□□□□ -1.22
CCDC171-201ENST00000380701 OVOS1Q6IE37 1185 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 SPATA18Q8TC71 538 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 MCOLN3Q8TDD5 553 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 ANKS1AQ92625 1134 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 ATP6V1G3Q96LB4 118 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 ZNF558Q96NG5 402 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 SUFUQ9UMX1 484 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 AP3M1Q9Y2T2 418 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 NFASCO94856 1347 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 A0A1B0GW55 424 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 ERBB2P04626 1255 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 ASGR1P07306 291 aa7.44□□□□□ -1.22
CCDC171-201ENST00000380701 DUX4L2P0CJ85 424 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms