RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 CELF3Q5SZQ8 465 aaKnown RBP18.55■□□□□ 0.56
UBL3-201ENST00000380680 AGR3Q8TD06 166 aa18.55■□□□□ 0.56
UBL3-201ENST00000380680 BSNDQ8WZ55 320 aa18.55■□□□□ 0.56
UBL3-201ENST00000380680 TSSK1BQ9BXA7 367 aa18.55■□□□□ 0.56
UBL3-201ENST00000380680 ZFYVE28Q9HCC9 887 aa18.55■□□□□ 0.56
UBL3-201ENST00000380680 RNF19AQ9NV58 838 aa18.55■□□□□ 0.56
UBL3-201ENST00000380680 NCANO14594 1321 aa18.55■□□□□ 0.56
UBL3-201ENST00000380680 KPNA7A9QM74 516 aa18.55■□□□□ 0.56
UBL3-201ENST00000380680 SPECC1L-ADORA2AF8WAN1 911 aa18.55■□□□□ 0.56
UBL3-201ENST00000380680 SNRPAP09012 282 aaKnown RBP18.55■□□□□ 0.56
UBL3-201ENST00000380680 VCPP55072 806 aaKnown RBP18.55■□□□□ 0.56
UBL3-201ENST00000380680 PDK1Q15118 436 aa18.55■□□□□ 0.56
UBL3-201ENST00000380680 KLC3Q6P597 504 aa18.55■□□□□ 0.56
UBL3-201ENST00000380680 ABHD15Q6UXT9 468 aa18.55■□□□□ 0.56
UBL3-201ENST00000380680 ATP6V1E2Q96A05 226 aa18.55■□□□□ 0.56
UBL3-201ENST00000380680 ERP27Q96DN0 273 aa18.55■□□□□ 0.56
UBL3-201ENST00000380680 PCMTD2Q9NV79 361 aa18.55■□□□□ 0.56
UBL3-201ENST00000380680 NOP53Q9NZM5 478 aaKnown RBP18.55■□□□□ 0.56
UBL3-201ENST00000380680 USH1CQ9Y6N9 552 aa18.55■□□□□ 0.56
UBL3-201ENST00000380680 PDE4DIPQ5VU43 2346 aa18.55■□□□□ 0.56
UBL3-201ENST00000380680 C17orf102A2RUQ5 167 aa18.55■□□□□ 0.56
UBL3-201ENST00000380680 ZNF862O60290 1169 aa18.55■□□□□ 0.56
UBL3-201ENST00000380680 APOEP02649 317 aa18.55■□□□□ 0.56
UBL3-201ENST00000380680 STX1BP61266 288 aa18.55■□□□□ 0.56
UBL3-201ENST00000380680 IFI35P80217 286 aaPredicted RBP18.55■□□□□ 0.56
UBL3-201ENST00000380680 ATP13A4Q4VNC1 1196 aa18.55■□□□□ 0.56
UBL3-201ENST00000380680 TREML2Q5T2D2 321 aa18.55■□□□□ 0.56
UBL3-201ENST00000380680 LRRC6Q86X45 466 aa18.55■□□□□ 0.56
UBL3-201ENST00000380680 PDCD6IPQ8WUM4 868 aaKnown RBP18.55■□□□□ 0.56
UBL3-201ENST00000380680 DDIT4Q9NX09 232 aa18.55■□□□□ 0.56
UBL3-201ENST00000380680 CFAP73A6NFT4 308 aa18.54■□□□□ 0.56
UBL3-201ENST00000380680 SPAG6O75602 509 aa18.54■□□□□ 0.56
UBL3-201ENST00000380680 LGALS2P05162 132 aa18.54■□□□□ 0.56
UBL3-201ENST00000380680 AKAP5P24588 427 aa18.54■□□□□ 0.56
UBL3-201ENST00000380680 MORF4L2Q15014 288 aa18.54■□□□□ 0.56
UBL3-201ENST00000380680 DBN1Q16643 649 aa18.54■□□□□ 0.56
UBL3-201ENST00000380680 PAN2Q504Q3 1202 aaKnown RBP18.54■□□□□ 0.56
UBL3-201ENST00000380680 PCDHB18PQ96TA0 734 aa18.54■□□□□ 0.56
UBL3-201ENST00000380680 ABHD16BQ9H3Z7 469 aa18.54■□□□□ 0.56
UBL3-201ENST00000380680 ATRNL1Q5VV63 1379 aa18.54■□□□□ 0.56
UBL3-201ENST00000380680 NUP188Q5SRE5 1749 aa18.54■□□□□ 0.56
UBL3-201ENST00000380680 MAFO75444 373 aaPredicted RBP18.54■□□□□ 0.56
UBL3-201ENST00000380680 RTP1P59025 263 aa18.54■□□□□ 0.56
UBL3-201ENST00000380680 FBXO47Q5MNV8 452 aa18.54■□□□□ 0.56
UBL3-201ENST00000380680 PARP9Q8IXQ6 854 aa18.54■□□□□ 0.56
UBL3-201ENST00000380680 CEP120Q8N960 986 aa18.54■□□□□ 0.56
UBL3-201ENST00000380680 WRAP73Q9P2S5 460 aaPredicted RBP18.54■□□□□ 0.56
UBL3-201ENST00000380680 NUP98P52948 1817 aa18.54■□□□□ 0.56
UBL3-201ENST00000380680 CYP1A2P05177 515 aa18.54■□□□□ 0.56
UBL3-201ENST00000380680 EIF4BP23588 611 aaKnown RBP18.54■□□□□ 0.56
UBL3-201ENST00000380680 SH2D4BQ5SQS7 431 aa18.54■□□□□ 0.56
UBL3-201ENST00000380680 MROH9Q5TGP6 573 aa18.54■□□□□ 0.56
UBL3-201ENST00000380680 NDUFAF2Q8N183 169 aa18.54■□□□□ 0.56
UBL3-201ENST00000380680 MYPNQ86TC9 1320 aa18.54■□□□□ 0.56
UBL3-201ENST00000380680 C3orf70A6NLC5 250 aaPredicted RBP18.53■□□□□ 0.56
UBL3-201ENST00000380680 TRIM49D1C9J1S8 452 aa18.53■□□□□ 0.56
UBL3-201ENST00000380680 EPHB2P29323 1055 aa18.53■□□□□ 0.56
UBL3-201ENST00000380680 HSDL1Q3SXM5 330 aa18.53■□□□□ 0.56
UBL3-201ENST00000380680 TTMPQ5BVD1 217 aa18.53■□□□□ 0.56
UBL3-201ENST00000380680 PPP1R13LQ8WUF5 828 aa18.53■□□□□ 0.56
UBL3-201ENST00000380680 DNAJB3Q8WWF6 145 aa18.53■□□□□ 0.56
UBL3-201ENST00000380680 MFSD14AQ96MC6 490 aa18.53■□□□□ 0.56
UBL3-201ENST00000380680 MAMLD1Q13495 774 aa18.53■□□□□ 0.56
UBL3-201ENST00000380680 RNF135Q8IUD6 432 aa18.53■□□□□ 0.56
UBL3-201ENST00000380680 VTA1Q9NP79 307 aa18.53■□□□□ 0.56
UBL3-201ENST00000380680 UBN1Q9NPG3 1134 aa18.53■□□□□ 0.56
UBL3-201ENST00000380680 AP1G2O75843 785 aa18.53■□□□□ 0.56
UBL3-201ENST00000380680 BCAT1P54687 386 aa18.53■□□□□ 0.56
UBL3-201ENST00000380680 LLGL2Q6P1M3 1020 aa18.53■□□□□ 0.56
UBL3-201ENST00000380680 FOXR1Q6PIV2 292 aa18.53■□□□□ 0.56
UBL3-201ENST00000380680 MTMR14Q8NCE2 650 aa18.53■□□□□ 0.56
UBL3-201ENST00000380680 TRIM62Q9BVG3 475 aa18.53■□□□□ 0.56
UBL3-201ENST00000380680 NUF2Q9BZD4 464 aa18.53■□□□□ 0.56
UBL3-201ENST00000380680 SP110Q9HB58 689 aa18.53■□□□□ 0.56
UBL3-201ENST00000380680 NAALADL1Q9UQQ1 740 aa18.53■□□□□ 0.56
UBL3-201ENST00000380680 CYB561D2O14569 222 aa18.53■□□□□ 0.56
UBL3-201ENST00000380680 ART3Q13508 389 aa18.53■□□□□ 0.56
UBL3-201ENST00000380680 ZNF268Q14587 947 aaPredicted RBP18.53■□□□□ 0.56
UBL3-201ENST00000380680 NFIL3Q16649 462 aa18.53■□□□□ 0.56
UBL3-201ENST00000380680 ICE2Q659A1 982 aa18.53■□□□□ 0.56
UBL3-201ENST00000380680 SPATA24Q86W54 205 aa18.53■□□□□ 0.56
UBL3-201ENST00000380680 SCUBE3Q8IX30 993 aa18.53■□□□□ 0.56
UBL3-201ENST00000380680 EIF1ADQ8N9N8 165 aaKnown RBP18.53■□□□□ 0.56
UBL3-201ENST00000380680 C3orf20Q8ND61 904 aa18.53■□□□□ 0.56
UBL3-201ENST00000380680 ITGA11Q9UKX5 1188 aa18.53■□□□□ 0.56
UBL3-201ENST00000380680 PECAM1P16284 738 aaPredicted RBP18.52■□□□□ 0.56
UBL3-201ENST00000380680 PRAMEP78395 509 aa18.52■□□□□ 0.56
UBL3-201ENST00000380680 EEF1DP3Q658K8 133 aa18.52■□□□□ 0.56
UBL3-201ENST00000380680 SH3BP5O60239 455 aa18.52■□□□□ 0.56
UBL3-201ENST00000380680 KCNA2P16389 499 aa18.52■□□□□ 0.56
UBL3-201ENST00000380680 RPL7AP62424 266 aaKnown RBP18.52■□□□□ 0.56
UBL3-201ENST00000380680 PDK2Q15119 407 aa18.52■□□□□ 0.56
UBL3-201ENST00000380680 KIF2BQ8N4N8 673 aa18.52■□□□□ 0.56
UBL3-201ENST00000380680 IFT43Q96FT9 208 aa18.52■□□□□ 0.56
UBL3-201ENST00000380680 SMYD3Q9H7B4 428 aa18.52■□□□□ 0.56
UBL3-201ENST00000380680 PCDH9Q9HC56 1237 aa18.52■□□□□ 0.56
UBL3-201ENST00000380680 TRAPPC3O43617 180 aa18.52■□□□□ 0.55
UBL3-201ENST00000380680 RFC1P35251 1148 aaPredicted RBP18.52■□□□□ 0.55
UBL3-201ENST00000380680 GLB1LQ6UWU2 654 aa18.52■□□□□ 0.55
UBL3-201ENST00000380680 TRIM67Q6ZTA4 783 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms