RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 RSAD1Q9HA92 442 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 LCMT1Q9UIC8 334 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 TIMM13Q9Y5L4 95 aaPredicted RBP13.61□□□□□ -0.23
TRIM40-206ENST00000376724 A0A0U1RQF3 1178 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 RAB27AP51159 221 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 GSCP56915 257 aaPredicted RBP13.61□□□□□ -0.23
TRIM40-206ENST00000376724 DSC3Q14574 896 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 CCDC142Q17RM4 750 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 SMTNL2Q2TAL5 461 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 PKDCCQ504Y2 493 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 FAM26DQ5JW98 314 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 EMBQ6PCB8 327 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 JAMLQ86YT9 394 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 CRYBG2Q8N1P7 616 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 TOP6BLQ8N6T0 577 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 NIPA2Q8N8Q9 360 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 EXD1Q8NHP7 514 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 SLC2A14Q8TDB8 520 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 SLC35F5Q8WV83 523 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 ATG4AQ8WYN0 398 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 FAM118BQ9BPY3 351 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 MIS12Q9H081 205 aa13.61□□□□□ -0.23
TRIM40-206ENST00000376724 KBTBD13C9JR72 458 aa13.6□□□□□ -0.23
TRIM40-206ENST00000376724 KRT10P13645 584 aa13.6□□□□□ -0.23
TRIM40-206ENST00000376724 COILP38432 576 aaPredicted RBP13.6□□□□□ -0.23
TRIM40-206ENST00000376724 FAM193AP78312 1265 aa13.6□□□□□ -0.23
TRIM40-206ENST00000376724 CUL1Q13616 776 aa13.6□□□□□ -0.23
TRIM40-206ENST00000376724 DHX34Q14147 1143 aaKnown RBP13.6□□□□□ -0.23
TRIM40-206ENST00000376724 TAF5Q15542 800 aa13.6□□□□□ -0.23
TRIM40-206ENST00000376724 PAN2Q504Q3 1202 aaKnown RBP13.6□□□□□ -0.23
TRIM40-206ENST00000376724 KCNT1Q5JUK3 1230 aa13.6□□□□□ -0.23
TRIM40-206ENST00000376724 ARHGAP17Q68EM7 881 aa13.6□□□□□ -0.23
TRIM40-206ENST00000376724 DSTYKQ6XUX3 929 aa13.6□□□□□ -0.23
TRIM40-206ENST00000376724 ARFGAP1Q8N6T3 406 aa13.6□□□□□ -0.23
TRIM40-206ENST00000376724 C3orf58Q8NDZ4 430 aa13.6□□□□□ -0.23
TRIM40-206ENST00000376724 TNIP3Q96KP6 325 aa13.6□□□□□ -0.23
TRIM40-206ENST00000376724 SENP8Q96LD8 212 aa13.6□□□□□ -0.23
TRIM40-206ENST00000376724 OSBPL8Q9BZF1 889 aa13.6□□□□□ -0.23
TRIM40-206ENST00000376724 RAB17Q9H0T7 212 aa13.6□□□□□ -0.23
TRIM40-206ENST00000376724 CHST7Q9NS84 486 aa13.6□□□□□ -0.23
TRIM40-206ENST00000376724 PCSK1NQ9UHG2 260 aa13.6□□□□□ -0.23
TRIM40-206ENST00000376724 HPCAL4Q9UM19 191 aa13.6□□□□□ -0.23
TRIM40-206ENST00000376724 LRRD1A4D1F6 860 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 ZNF623O75123 536 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 LRCH4O75427 683 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 WARSP23381 471 aaKnown RBP13.59□□□□□ -0.23
TRIM40-206ENST00000376724 CETN2P41208 172 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 PTGIRP43119 386 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 CYP1B1Q16678 543 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 CDO1Q16878 200 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 MFSD7Q6UXD7 560 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 LIMS2Q7Z4I7 341 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 RCOR2Q8IZ40 523 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 ANKRD52Q8NB46 1076 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 B3GALNT2Q8NCR0 500 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 MAIP1Q8WWC4 291 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 RAPGEF5Q92565 580 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 PGBD4Q96DM1 585 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 SLITRK1Q96PX8 696 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 B3GNT5Q9BYG0 378 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 DNAI2Q9GZS0 605 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.59□□□□□ -0.23
TRIM40-206ENST00000376724 NEUROG2Q9H2A3 272 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.59□□□□□ -0.23
TRIM40-206ENST00000376724 PCYOX1Q9UHG3 505 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 RASAL2Q9UJF2 1139 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 FAM187AA6NFU0 413 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 I3L4J1 428 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 CLDN5O00501 218 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 RNF8O76064 485 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 LCP1P13796 627 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 PDGFRAP16234 1089 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 IL1R2P27930 398 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 TKTP29401 623 aaKnown RBP13.59□□□□□ -0.23
TRIM40-206ENST00000376724 ECHS1P30084 290 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 BST2Q10589 180 aaKnown RBP13.59□□□□□ -0.23
TRIM40-206ENST00000376724 GPS2Q13227 327 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 HADHQ16836 314 aaKnown RBP13.59□□□□□ -0.23
TRIM40-206ENST00000376724 SH3PXD2AQ5TCZ1 1133 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 LRRC38Q5VT99 294 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 FNIP1Q8TF40 1166 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 HASPINQ8TF76 798 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 RXFP2Q8WXD0 754 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 CAVIN3Q969G5 261 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 RBM41Q96IZ5 413 aaKnown RBP13.59□□□□□ -0.23
TRIM40-206ENST00000376724 ERP44Q9BS26 406 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 TRAIPQ9BWF2 469 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 SLC4A5Q9BY07 1137 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 UNC93B1Q9H1C4 597 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 DDX43Q9NXZ2 648 aaKnown RBP13.59□□□□□ -0.23
TRIM40-206ENST00000376724 R3HDM2Q9Y2K5 976 aaKnown RBP13.59□□□□□ -0.23
TRIM40-206ENST00000376724 SNX24Q9Y343 169 aa13.59□□□□□ -0.23
TRIM40-206ENST00000376724 ARVCFO00192 962 aa13.58□□□□□ -0.24
TRIM40-206ENST00000376724 GABBR2O75899 941 aa13.58□□□□□ -0.24
TRIM40-206ENST00000376724 SETSIPP0DME0 302 aa13.58□□□□□ -0.24
TRIM40-206ENST00000376724 PTPN1P18031 435 aaKnown RBP13.58□□□□□ -0.24
TRIM40-206ENST00000376724 GPD1P21695 349 aa13.58□□□□□ -0.24
TRIM40-206ENST00000376724 OAS2P29728 719 aaKnown RBP13.58□□□□□ -0.24
TRIM40-206ENST00000376724 FLT3P36888 993 aa13.58□□□□□ -0.24
TRIM40-206ENST00000376724 BCAT1P54687 386 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms