RNA–Protein interactions for RNA: ENST00000366790.3

PARP1-201, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2 BASIC

Gene PARP1, Length 570 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-201ENST00000366790 CST3P01034 146 aaPredicted RBP11.12□□□□□ -0.63
PARP1-201ENST00000366790 HSP90AA1P07900 732 aaKnown RBP11.12□□□□□ -0.63
PARP1-201ENST00000366790 USP17L7P0C7H9 530 aa11.12□□□□□ -0.63
PARP1-201ENST00000366790 SLFN14P0C7P3 912 aa11.12□□□□□ -0.63
PARP1-201ENST00000366790 DLATP10515 647 aaKnown RBP11.12□□□□□ -0.63
PARP1-201ENST00000366790 TNNI1P19237 187 aa11.12□□□□□ -0.63
PARP1-201ENST00000366790 SDHBP21912 280 aa11.12□□□□□ -0.63
PARP1-201ENST00000366790 LMO2P25791 158 aa11.12□□□□□ -0.63
PARP1-201ENST00000366790 ATICP31939 592 aa11.12□□□□□ -0.63
PARP1-201ENST00000366790 ME1P48163 572 aa11.12□□□□□ -0.63
PARP1-201ENST00000366790 PDE6CP51160 858 aa11.12□□□□□ -0.63
PARP1-201ENST00000366790 USP4Q13107 963 aa11.12□□□□□ -0.63
PARP1-201ENST00000366790 ZNF77Q15935 545 aa11.12□□□□□ -0.63
PARP1-201ENST00000366790 CCDC142Q17RM4 750 aa11.12□□□□□ -0.63
PARP1-201ENST00000366790 KNOP1Q1ED39 458 aaKnown RBP11.12□□□□□ -0.63
PARP1-201ENST00000366790 TMEM196Q5HYL7 178 aa11.12□□□□□ -0.63
PARP1-201ENST00000366790 LAIR1Q6GTX8 287 aa11.12□□□□□ -0.63
PARP1-201ENST00000366790 SLC9A9Q8IVB4 645 aa11.12□□□□□ -0.63
PARP1-201ENST00000366790 FSIP1Q8NA03 581 aa11.12□□□□□ -0.63
PARP1-201ENST00000366790 STKLD1Q8NE28 680 aa11.12□□□□□ -0.63
PARP1-201ENST00000366790 RIN3Q8TB24 985 aa11.12□□□□□ -0.63
PARP1-201ENST00000366790 MYCBPAPQ8TBZ2 947 aa11.12□□□□□ -0.63
PARP1-201ENST00000366790 MYLPFQ96A32 169 aa11.12□□□□□ -0.63
PARP1-201ENST00000366790 CHFRQ96EP1 664 aa11.12□□□□□ -0.63
PARP1-201ENST00000366790 TTLL2Q9BWV7 592 aa11.12□□□□□ -0.63
PARP1-201ENST00000366790 GZF1Q9H116 711 aaPredicted RBP11.12□□□□□ -0.63
PARP1-201ENST00000366790 BLZF1Q9H2G9 400 aa11.12□□□□□ -0.63
PARP1-201ENST00000366790 VRTNQ9H8Y1 702 aa11.12□□□□□ -0.63
PARP1-201ENST00000366790 EHD2Q9NZN4 543 aa11.12□□□□□ -0.63
PARP1-201ENST00000366790 GCNT4Q9P109 453 aa11.12□□□□□ -0.63
PARP1-201ENST00000366790 CNOT1A5YKK6 2376 aaKnown RBP11.11□□□□□ -0.63
PARP1-201ENST00000366790 CCDC163A0A0D9SF12 145 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 OTOL1A6NHN0 477 aaPredicted RBP11.11□□□□□ -0.63
PARP1-201ENST00000366790 CHURC1-FNTBB4DL54 471 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 TULP1O00294 542 aaPredicted RBP11.11□□□□□ -0.63
PARP1-201ENST00000366790 TRIM66O15016 1216 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 KLRC4O43908 158 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 LRP3O75074 770 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 MYL1P05976 194 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 TGM1P22735 817 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 CASP1P29466 404 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 GNL1P36915 607 aaPredicted RBP11.11□□□□□ -0.63
PARP1-201ENST00000366790 PPP3CCP48454 512 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 CYP2J2P51589 502 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 AP3M2P53677 418 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 PSMC1P62191 440 aaKnown RBP11.11□□□□□ -0.63
PARP1-201ENST00000366790 NOP14P78316 857 aaKnown RBP11.11□□□□□ -0.63
PARP1-201ENST00000366790 CLDN10P78369 228 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 DNM1Q05193 864 aaKnown RBP11.11□□□□□ -0.63
PARP1-201ENST00000366790 PSMD2Q13200 908 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 CUL4BQ13620 913 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 MTF1Q14872 753 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 FOXD4L5Q5VV16 416 aaPredicted RBP11.11□□□□□ -0.63
PARP1-201ENST00000366790 CC2D1AQ6P1N0 951 aaPredicted RBP11.11□□□□□ -0.63
PARP1-201ENST00000366790 Q6ZS52 159 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 DENND5BQ6ZUT9 1274 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 LONP2Q86WA8 852 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 SCN4BQ8IWT1 228 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 NELFCDQ8IXH7 590 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 CEP57L1Q8IYX8 460 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 RDH13Q8NBN7 331 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 TTC8Q8TAM2 541 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 OSCP1Q8WVF1 389 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 FOXD4L4Q8WXT5 416 aaPredicted RBP11.11□□□□□ -0.63
PARP1-201ENST00000366790 ZNF516Q92618 1163 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 EXOC4Q96A65 974 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 PCED1BQ96HM7 432 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 C8orf48Q96LL4 319 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 MMS19Q96T76 1030 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 MRPL45Q9BRJ2 306 aaKnown RBP11.11□□□□□ -0.63
PARP1-201ENST00000366790 XYLT2Q9H1B5 865 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 EBF3Q9H4W6 596 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 SLC39A2Q9NP94 309 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 DMAC2Q9NW81 257 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 USP25Q9UHP3 1055 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 GMEB2Q9UKD1 530 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 RAB23Q9ULC3 237 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 ARHGAP26Q9UNA1 814 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 NME7Q9Y5B8 376 aa11.11□□□□□ -0.63
PARP1-201ENST00000366790 TPRP12270 2363 aaKnown RBP11.11□□□□□ -0.63
PARP1-201ENST00000366790 PRR5-ARHGAP8B1AHC4 643 aa11.1□□□□□ -0.63
PARP1-201ENST00000366790 HRO43593 1189 aa11.1□□□□□ -0.63
PARP1-201ENST00000366790 ACTN4O43707 911 aaKnown RBP11.1□□□□□ -0.63
PARP1-201ENST00000366790 EXOC3O60645 756 aa11.1□□□□□ -0.63
PARP1-201ENST00000366790 ATG13O75143 517 aa11.1□□□□□ -0.63
PARP1-201ENST00000366790 CKMP06732 381 aa11.1□□□□□ -0.63
PARP1-201ENST00000366790 RETP07949 1114 aa11.1□□□□□ -0.63
PARP1-201ENST00000366790 DRD1P21728 446 aa11.1□□□□□ -0.63
PARP1-201ENST00000366790 BDNFP23560 247 aa11.1□□□□□ -0.63
PARP1-201ENST00000366790 ANXA13P27216 316 aa11.1□□□□□ -0.63
PARP1-201ENST00000366790 GJA4P35212 333 aa11.1□□□□□ -0.63
PARP1-201ENST00000366790 GRIK1P39086 918 aa11.1□□□□□ -0.63
PARP1-201ENST00000366790 AFMP43652 599 aa11.1□□□□□ -0.63
PARP1-201ENST00000366790 TNNC1P63316 161 aa11.1□□□□□ -0.63
PARP1-201ENST00000366790 ARHGAP8P85298 464 aa11.1□□□□□ -0.63
PARP1-201ENST00000366790 LMNB2Q03252 620 aa11.1□□□□□ -0.63
PARP1-201ENST00000366790 GRSF1Q12849 480 aaKnown RBP eCLIP11.1□□□□□ -0.63
PARP1-201ENST00000366790 TRPC3Q13507 836 aa11.1□□□□□ -0.63
PARP1-201ENST00000366790 PKP1Q13835 747 aa11.1□□□□□ -0.63
PARP1-201ENST00000366790 WDR72Q3MJ13 1102 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms