RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 COL5A2P05997 1499 aaPredicted RBP0.35□□□□□ -2.35
RNU6-228P-201ENST00000362700 PATL2C9JE40 543 aaKnown RBP0.35□□□□□ -2.35
RNU6-228P-201ENST00000362700 BTBD19C9JJ37 291 aa0.35□□□□□ -2.35
RNU6-228P-201ENST00000362700 KCNQ3O43525 872 aa0.35□□□□□ -2.35
RNU6-228P-201ENST00000362700 TMEM127O75204 238 aa0.35□□□□□ -2.35
RNU6-228P-201ENST00000362700 CTSSP25774 331 aa0.35□□□□□ -2.35
RNU6-228P-201ENST00000362700 PDE1AP54750 535 aa0.35□□□□□ -2.35
RNU6-228P-201ENST00000362700 TBC1D25Q3MII6 688 aa0.35□□□□□ -2.35
RNU6-228P-201ENST00000362700 MRM1Q6IN84 353 aaKnown RBP0.35□□□□□ -2.35
RNU6-228P-201ENST00000362700 TRMT1LQ7Z2T5 733 aaKnown RBP0.35□□□□□ -2.35
RNU6-228P-201ENST00000362700 ADGRA1Q86SQ6 560 aa0.35□□□□□ -2.35
RNU6-228P-201ENST00000362700 ADIPOR2Q86V24 386 aa0.35□□□□□ -2.35
RNU6-228P-201ENST00000362700 Q8N7P7 452 aa0.35□□□□□ -2.35
RNU6-228P-201ENST00000362700 ABHD11Q8NFV4 315 aa0.35□□□□□ -2.35
RNU6-228P-201ENST00000362700 PNISRQ8TF01 805 aaKnown RBP0.35□□□□□ -2.35
RNU6-228P-201ENST00000362700 CCDC17Q96LX7 622 aa0.35□□□□□ -2.35
RNU6-228P-201ENST00000362700 TLR10Q9BXR5 811 aa0.35□□□□□ -2.35
RNU6-228P-201ENST00000362700 CIPCQ9C0C6 399 aa0.35□□□□□ -2.35
RNU6-228P-201ENST00000362700 ZNF696Q9H7X3 374 aa0.35□□□□□ -2.35
RNU6-228P-201ENST00000362700 MLXIPLQ9NP71 852 aa0.35□□□□□ -2.35
RNU6-228P-201ENST00000362700 ANAPC4Q9UJX5 808 aa0.35□□□□□ -2.35
RNU6-228P-201ENST00000362700 PCDHA12Q9UN75 941 aa0.35□□□□□ -2.35
RNU6-228P-201ENST00000362700 LIMCH1Q9UPQ0 1083 aa0.35□□□□□ -2.35
RNU6-228P-201ENST00000362700 SH2B3Q9UQQ2 575 aa0.35□□□□□ -2.35
RNU6-228P-201ENST00000362700 INSL5Q9Y5Q6 135 aa0.35□□□□□ -2.35
RNU6-228P-201ENST00000362700 MACF1Q9UPN3 7388 aaKnown RBP0.35□□□□□ -2.35
RNU6-228P-201ENST00000362700 RPS10-NUDT3A0A1W2PQS6 291 aa0.34□□□□□ -2.36
RNU6-228P-201ENST00000362700 H0YGN5 161 aa0.34□□□□□ -2.36
RNU6-228P-201ENST00000362700 PHF2O75151 1096 aa0.34□□□□□ -2.36
RNU6-228P-201ENST00000362700 PDE8BO95263 885 aa0.34□□□□□ -2.36
RNU6-228P-201ENST00000362700 PRSS2P07478 247 aa0.34□□□□□ -2.36
RNU6-228P-201ENST00000362700 FCGR1AP12314 374 aa0.34□□□□□ -2.36
RNU6-228P-201ENST00000362700 PTX3P26022 381 aaPredicted RBP0.34□□□□□ -2.36
RNU6-228P-201ENST00000362700 ALDH1A3P47895 512 aa0.34□□□□□ -2.36
RNU6-228P-201ENST00000362700 KRTAP10-10P60014 251 aa0.34□□□□□ -2.36
RNU6-228P-201ENST00000362700 KIF19Q2TAC6 998 aa0.34□□□□□ -2.36
RNU6-228P-201ENST00000362700 ZC2HC1BQ5TFG8 222 aa0.34□□□□□ -2.36
RNU6-228P-201ENST00000362700 SEM1Q6ZVN7 128 aa0.34□□□□□ -2.36
RNU6-228P-201ENST00000362700 IL17RCQ8NAC3 791 aa0.34□□□□□ -2.36
RNU6-228P-201ENST00000362700 RP9Q8TA86 221 aaKnown RBP0.34□□□□□ -2.36
RNU6-228P-201ENST00000362700 SGSM3Q96HU1 749 aa0.34□□□□□ -2.36
RNU6-228P-201ENST00000362700 SLC46A1Q96NT5 459 aa0.34□□□□□ -2.36
RNU6-228P-201ENST00000362700 VSX1Q9NZR4 365 aaPredicted RBP0.34□□□□□ -2.36
RNU6-228P-201ENST00000362700 DNAJB11Q9UBS4 358 aa0.34□□□□□ -2.36
RNU6-228P-201ENST00000362700 SPATA31A3Q5VYP0 1347 aa0.34□□□□□ -2.36
RNU6-228P-201ENST00000362700 TRAV20A0A0B4J274 112 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 CLEC18AA5D8T8 446 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 KRTAP16-1A8MUX0 517 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 ZNF814B7Z6K7 855 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 DIAPH1O60610 1272 aaKnown RBP0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 CRTAMO95727 393 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 IL6RP08887 468 aaPredicted RBP0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 ALDH4A1P30038 563 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 IARSP41252 1262 aaKnown RBP0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 RFX2P48378 723 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 SLC8A3P57103 927 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 SEC61A1P61619 476 aaKnown RBP0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 PHEXP78562 749 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 HSF1Q00613 529 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 PEX6Q13608 980 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 SLC39A14Q15043 492 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 ZNF174Q15697 407 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 NHLRC1Q6VVB1 395 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 OTOP1Q7RTM1 612 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 TMPRSS9Q7Z410 1059 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 SMIM29Q86T20 159 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 KIF18BQ86Y91 864 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 FAM217AQ8IXS0 508 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 CLEC18CQ8NCF0 446 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 NSUN7Q8NE18 718 aaKnown RBP0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 FAM136AQ96C01 138 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 UNKQ9C0B0 810 aaKnown RBP0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 WDR13Q9H1Z4 485 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 FZD3Q9NPG1 666 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 ABCB10Q9NRK6 738 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 TMEM45AQ9NWC5 275 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 COL20A1Q9P218 1284 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 SLC23A1Q9UHI7 598 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 CCNL1Q9UK58 526 aaPredicted RBP0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 TCF19Q9Y242 345 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 UTP18Q9Y5J1 556 aaKnown RBP eCLIP0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 RNF215Q9Y6U7 377 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 TENM3Q9P273 2699 aa0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 ANKRD17O75179 2603 aaKnown RBP0.33□□□□□ -2.36
RNU6-228P-201ENST00000362700 COL16A1Q07092 1604 aaPredicted RBP0.32□□□□□ -2.36
RNU6-228P-201ENST00000362700 IQCA1LA6NCM1 817 aa0.32□□□□□ -2.36
RNU6-228P-201ENST00000362700 WNT10BO00744 389 aa0.32□□□□□ -2.36
RNU6-228P-201ENST00000362700 DVL2O14641 736 aa0.32□□□□□ -2.36
RNU6-228P-201ENST00000362700 SLC16A3O15427 465 aaKnown RBP0.32□□□□□ -2.36
RNU6-228P-201ENST00000362700 TEX33O43247 280 aa0.32□□□□□ -2.36
RNU6-228P-201ENST00000362700 KIF1CO43896 1103 aaKnown RBP0.32□□□□□ -2.36
RNU6-228P-201ENST00000362700 AMBPP02760 352 aa0.32□□□□□ -2.36
RNU6-228P-201ENST00000362700 PFKMP08237 780 aa0.32□□□□□ -2.36
RNU6-228P-201ENST00000362700 LIPAP38571 399 aa0.32□□□□□ -2.36
RNU6-228P-201ENST00000362700 CDKN1AP38936 164 aa0.32□□□□□ -2.36
RNU6-228P-201ENST00000362700 CLCN2P51788 898 aa0.32□□□□□ -2.36
RNU6-228P-201ENST00000362700 PIGFQ07326 219 aa0.32□□□□□ -2.36
RNU6-228P-201ENST00000362700 PPARAQ07869 468 aa0.32□□□□□ -2.36
RNU6-228P-201ENST00000362700 ARL16Q0P5N6 197 aa0.32□□□□□ -2.36
RNU6-228P-201ENST00000362700 PMS2P11Q13670 270 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms