RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 DCUN1D2Q6PH85 259 aa5.37□□□□□ -1.55
ATXN3-202ENST00000359366 ALKAL1Q6UXT8 129 aa5.37□□□□□ -1.55
ATXN3-202ENST00000359366 B4GALNT4Q76KP1 1039 aa5.37□□□□□ -1.55
ATXN3-202ENST00000359366 ERICH1Q86X53 443 aa5.37□□□□□ -1.55
ATXN3-202ENST00000359366 ZNF677Q86XU0 584 aa5.37□□□□□ -1.55
ATXN3-202ENST00000359366 PHF13Q86YI8 300 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-202ENST00000359366 RASGEF1CQ8N431 466 aa5.37□□□□□ -1.55
ATXN3-202ENST00000359366 UBL4BQ8N7F7 174 aa5.37□□□□□ -1.55
ATXN3-202ENST00000359366 TSEN2Q8NCE0 465 aaKnown RBP5.37□□□□□ -1.55
ATXN3-202ENST00000359366 TMEM35BQ8NCS4 154 aa5.37□□□□□ -1.55
ATXN3-202ENST00000359366 ARMC2Q8NEN0 867 aa5.37□□□□□ -1.55
ATXN3-202ENST00000359366 ATL2Q8NHH9 583 aa5.37□□□□□ -1.55
ATXN3-202ENST00000359366 CLEC4CQ8WTT0 213 aa5.37□□□□□ -1.55
ATXN3-202ENST00000359366 HAUS1Q96CS2 278 aa5.37□□□□□ -1.55
ATXN3-202ENST00000359366 FAXDC2Q96IV6 333 aa5.37□□□□□ -1.55
ATXN3-202ENST00000359366 RMDN2Q96LZ7 410 aa5.37□□□□□ -1.55
ATXN3-202ENST00000359366 B3GNT5Q9BYG0 378 aa5.37□□□□□ -1.55
ATXN3-202ENST00000359366 METTL5Q9NRN9 209 aaKnown RBP5.37□□□□□ -1.55
ATXN3-202ENST00000359366 UTP6Q9NYH9 597 aaKnown RBP5.37□□□□□ -1.55
ATXN3-202ENST00000359366 UVRAGQ9P2Y5 699 aa5.37□□□□□ -1.55
ATXN3-202ENST00000359366 ITGA11Q9UKX5 1188 aa5.37□□□□□ -1.55
ATXN3-202ENST00000359366 NOD1Q9Y239 953 aa5.37□□□□□ -1.55
ATXN3-202ENST00000359366 INPP5FQ9Y2H2 1132 aa5.37□□□□□ -1.55
ATXN3-202ENST00000359366 R3HDM2Q9Y2K5 976 aaKnown RBP5.37□□□□□ -1.55
ATXN3-202ENST00000359366 C2CD2Q9Y426 696 aa5.37□□□□□ -1.55
ATXN3-202ENST00000359366 TTC3P53804 2025 aa5.37□□□□□ -1.55
ATXN3-202ENST00000359366 CLDN5O00501 218 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 DAPK3O43293 454 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 MTA2O94776 668 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 POMCP01189 267 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 RARAP10276 462 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 GNAT1P11488 350 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 HOXC8P31273 242 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 CTNNA1P35221 906 aaKnown RBP5.36□□□□□ -1.55
ATXN3-202ENST00000359366 VPS41P49754 854 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 SCNN1GP51170 649 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 HLTFQ14527 1009 aaKnown RBP eCLIP5.36□□□□□ -1.55
ATXN3-202ENST00000359366 ZBTB6Q15916 424 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 GOLGA7BQ2TAP0 167 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 PLEKHA7Q6IQ23 1121 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 CTU1Q7Z7A3 348 aaKnown RBP5.36□□□□□ -1.55
ATXN3-202ENST00000359366 SERINC5Q86VE9 423 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 PRELID2Q8N945 189 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 FEZF2Q8TBJ5 459 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 RPGRIP1Q96KN7 1286 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 FAM81BQ96LP2 452 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 SENP6Q9GZR1 1112 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-202ENST00000359366 MIS12Q9H081 205 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 C10orf88Q9H8K7 445 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 ZWILCHQ9H900 591 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 RMI1Q9H9A7 625 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 SRRDQ9UH36 339 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 PCSK1NQ9UHG2 260 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 TSPAN16Q9UKR8 245 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 Q9Y3F1 56 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 PDCD11Q14690 1871 aaKnown RBP5.36□□□□□ -1.55
ATXN3-202ENST00000359366 TARSL2A2RTX5 802 aaKnown RBP5.36□□□□□ -1.55
ATXN3-202ENST00000359366 E5RJQ4 531 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 M0QZ92 97 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 ERLIN1O75477 346 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 PROSCO94903 275 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 ALDH1A1P00352 501 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 INHAP05111 366 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 PFKMP08237 780 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 RALAP11233 206 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 ACLYP53396 1101 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 HADHBP55084 474 aaKnown RBP5.36□□□□□ -1.55
ATXN3-202ENST00000359366 MYO1EQ12965 1108 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 PDCLQ13371 301 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 ITGA7Q13683 1181 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 CDO1Q16878 200 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 SGO2Q562F6 1265 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 UBAP2Q5T6F2 1119 aaKnown RBP5.36□□□□□ -1.55
ATXN3-202ENST00000359366 CCSAPQ6IQ19 270 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-202ENST00000359366 CCDC70Q6NSX1 233 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 TRNP1Q6NT89 227 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 PMF1Q6P1K2 205 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 THSD4Q6ZMP0 1018 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 PACS2Q86VP3 889 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 OSTM1Q86WC4 334 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 TTC30AQ86WT1 665 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 SCUBE3Q8IX30 993 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 ARFGAP1Q8N6T3 406 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 C3orf58Q8NDZ4 430 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 GSTCDQ8NEC7 633 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 BEST2Q8NFU1 509 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 LRRN4Q8WUT4 740 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 ZNF296Q8WUU4 475 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-202ENST00000359366 KBTBD7Q8WVZ9 684 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 C17orf50Q8WW18 174 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 MAGOHBQ96A72 148 aaKnown RBP5.36□□□□□ -1.55
ATXN3-202ENST00000359366 DDX27Q96GQ7 796 aaKnown RBP5.36□□□□□ -1.55
ATXN3-202ENST00000359366 UPF3AQ9H1J1 476 aaKnown RBP5.36□□□□□ -1.55
ATXN3-202ENST00000359366 WNT8AQ9H1J5 351 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 CARD9Q9H257 536 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 CHST7Q9NS84 486 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 FAM105AQ9NUU6 356 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 PARVAQ9NVD7 372 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 CNTN3Q9P232 1028 aa5.36□□□□□ -1.55
ATXN3-202ENST00000359366 SAE1Q9UBE0 346 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms