RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 PPARGC1AQ9UBK2 798 aaKnown RBP11.73□□□□□ -0.53
FN1-204ENST00000356005 RHOCP08134 193 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 ZBTB41Q5SVQ8 909 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 SLC30A5Q8TAD4 765 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 CPB2Q96IY4 423 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 ING2Q9H160 280 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 IGFLR1Q9H665 355 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 VPS28Q9UK41 221 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 HOXA10P31260 410 aaPredicted RBP11.72□□□□□ -0.53
FN1-204ENST00000356005 PGM5Q15124 567 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 IDI2Q9BXS1 227 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 ZNF556Q9HAH1 456 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.72□□□□□ -0.53
FN1-204ENST00000356005 RIC1Q4ADV7 1423 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 TRAV19A0A0A6YYK7 116 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 PRMT3O60678 531 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 SLAIN1Q8ND83 568 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 RNPC3Q96LT9 517 aaKnown RBP11.72□□□□□ -0.53
FN1-204ENST00000356005 SETD4Q9NVD3 440 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 TRAF3IP3Q9Y228 551 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 CAPN7Q9Y6W3 813 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 ZNF839A8K0R7 811 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 GEMP55040 296 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 SESN2P58004 480 aaPredicted RBP11.72□□□□□ -0.53
FN1-204ENST00000356005 BYSLQ13895 437 aaKnown RBP11.72□□□□□ -0.53
FN1-204ENST00000356005 GLRA4Q5JXX5 417 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 SLC27A1Q6PCB7 646 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 TMEM86AQ8N2M4 240 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 FIBCD1Q8N539 461 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 IPMKQ8NFU5 416 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 CCDC126Q96EE4 140 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 TINF2Q9BSI4 451 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 MTMR12Q9C0I1 747 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 SF3B1O75533 1304 aaKnown RBP eCLIP11.72□□□□□ -0.538e-6■■■■■ 107
FN1-204ENST00000356005 F5H423 210 aaPredicted RBP11.72□□□□□ -0.53
FN1-204ENST00000356005 INSRRP14616 1297 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 GUCY2CP25092 1073 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 CCR1P32246 355 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 KRT20P35900 424 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 SLC35G2Q8TBE7 412 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 GRAMD1AQ96CP6 724 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 TSPAN18Q96SJ8 248 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 ANGPT2O15123 496 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 TBC1D12O60347 775 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 ACO1P21399 889 aaKnown RBP11.72□□□□□ -0.53
FN1-204ENST00000356005 ZSCAN26Q16670 478 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 FAM83EQ2M2I3 478 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 KSR1Q8IVT5 923 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 AGPAT3Q9NRZ7 376 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.72□□□□□ -0.53
FN1-204ENST00000356005 RPTORQ8N122 1335 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 SUPT3HB4E1H0 165 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 LSM8O95777 96 aaKnown RBP11.72□□□□□ -0.53
FN1-204ENST00000356005 MCF2P10911 925 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 RAP1GDS1P52306 607 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 SYN2Q92777 582 aaPredicted RBP11.72□□□□□ -0.53
FN1-204ENST00000356005 DTNBP1Q96EV8 351 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 NAT9Q9BTE0 207 aa11.72□□□□□ -0.53
FN1-204ENST00000356005 CASTOR2A6NHX0 329 aa11.71□□□□□ -0.53
FN1-204ENST00000356005 PSTPIP1O43586 416 aa11.71□□□□□ -0.53
FN1-204ENST00000356005 UBA3Q8TBC4 463 aa11.71□□□□□ -0.53
FN1-204ENST00000356005 METTL5Q9NRN9 209 aaKnown RBP11.71□□□□□ -0.53
FN1-204ENST00000356005 PSMD12O00232 456 aaPredicted RBP11.71□□□□□ -0.53
FN1-204ENST00000356005 GYG2O15488 501 aa11.71□□□□□ -0.53
FN1-204ENST00000356005 TLL1O43897 1013 aa11.71□□□□□ -0.53
FN1-204ENST00000356005 SOAT2O75908 522 aa11.71□□□□□ -0.53
FN1-204ENST00000356005 CTNNB1P35222 781 aa11.71□□□□□ -0.53
FN1-204ENST00000356005 SYTL5Q8TDW5 730 aaPredicted RBP11.71□□□□□ -0.53
FN1-204ENST00000356005 NOVA2Q9UNW9 492 aaKnown RBP11.71□□□□□ -0.53
FN1-204ENST00000356005 HMGCRP04035 888 aa11.71□□□□□ -0.53
FN1-204ENST00000356005 NNTQ13423 1086 aa11.71□□□□□ -0.53
FN1-204ENST00000356005 DACT2Q5SW24 774 aa11.71□□□□□ -0.53
FN1-204ENST00000356005 SNX24Q9Y343 169 aa11.71□□□□□ -0.53
FN1-204ENST00000356005 ZSCAN9O15535 394 aaPredicted RBP11.71□□□□□ -0.54
FN1-204ENST00000356005 GRAP2O75791 330 aa11.71□□□□□ -0.54
FN1-204ENST00000356005 CAPZA2P47755 286 aa11.71□□□□□ -0.54
FN1-204ENST00000356005 ZNF135P52742 658 aaPredicted RBP11.71□□□□□ -0.54
FN1-204ENST00000356005 SHC4Q6S5L8 630 aa11.71□□□□□ -0.54
FN1-204ENST00000356005 KLHL29Q96CT2 875 aa11.71□□□□□ -0.54
FN1-204ENST00000356005 BRD8Q9H0E9 1235 aa11.71□□□□□ -0.54
FN1-204ENST00000356005 WDR41Q9HAD4 459 aa11.71□□□□□ -0.54
FN1-204ENST00000356005 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.71□□□□□ -0.54
FN1-204ENST00000356005 ZC3H7BQ9UGR2 993 aaKnown RBP11.71□□□□□ -0.54
FN1-204ENST00000356005 SYNDIG1LA6NDD5 238 aa11.71□□□□□ -0.54
FN1-204ENST00000356005 MYL2P10916 166 aa11.71□□□□□ -0.54
FN1-204ENST00000356005 CDH2P19022 906 aaPredicted RBP11.71□□□□□ -0.54
FN1-204ENST00000356005 CHRM3P20309 590 aa11.71□□□□□ -0.54
FN1-204ENST00000356005 CASP1P29466 404 aa11.71□□□□□ -0.54
FN1-204ENST00000356005 MAGEC3Q8TD91 643 aa11.71□□□□□ -0.54
FN1-204ENST00000356005 MAF1Q9H063 256 aa11.71□□□□□ -0.54
FN1-204ENST00000356005 IFT88Q13099 833 aa11.71□□□□□ -0.54
FN1-204ENST00000356005 SNCBQ16143 134 aa11.71□□□□□ -0.54
FN1-204ENST00000356005 AMHR2Q16671 573 aa11.71□□□□□ -0.54
FN1-204ENST00000356005 LY6KQ17RY6 165 aa11.71□□□□□ -0.54
FN1-204ENST00000356005 ZC2HC1CQ53FD0 456 aaPredicted RBP11.71□□□□□ -0.54
FN1-204ENST00000356005 NUGGCQ68CJ6 796 aa11.71□□□□□ -0.54
FN1-204ENST00000356005 PCYOX1LQ8NBM8 494 aa11.71□□□□□ -0.54
FN1-204ENST00000356005 CLPBQ9H078 707 aa11.71□□□□□ -0.54
FN1-204ENST00000356005 DMAP1Q9NPF5 467 aaPredicted RBP11.71□□□□□ -0.54
FN1-204ENST00000356005 KCNQ5Q9NR82 932 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms