RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 CHST7Q9NS84 486 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 KLHL14Q9P2G3 628 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 ARL2BPQ9Y2Y0 163 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 USP15Q9Y4E8 981 aaPredicted RBP3.91□□□□□ -1.78
RNF38-203ENST00000353739 MYH9P35579 1960 aaKnown RBP3.9□□□□□ -1.78
RNF38-203ENST00000353739 ADM5C9JUS6 153 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 ITGB3P05106 788 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 ALADP13716 330 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 TNFSF9P41273 254 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 SKIV2L2P42285 1042 aaKnown RBP3.9□□□□□ -1.78
RNF38-203ENST00000353739 HIRAP54198 1017 aaPredicted RBP3.9□□□□□ -1.78
RNF38-203ENST00000353739 RAD23BP54727 409 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 PLCB3Q01970 1234 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 SLC25A11Q02978 314 aaKnown RBP3.9□□□□□ -1.78
RNF38-203ENST00000353739 ILF2Q12905 390 aaKnown RBP3.9□□□□□ -1.78
RNF38-203ENST00000353739 GPS1Q13098 491 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 TRADDQ15628 312 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 GRIK4Q16099 956 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 SKIDA1Q1XH10 827 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 ANKRD20A8PQ5CZ79 823 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 RNF43Q68DV7 783 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 ARHGAP17Q68EM7 881 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 AADACL2Q6P093 401 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 ZNF449Q6P9G9 518 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 C6orf89Q6UWU4 347 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 PIGWQ7Z7B1 504 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 CCNJLQ8IV13 435 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 EPS8L3Q8TE67 593 aaKnown RBP3.9□□□□□ -1.78
RNF38-203ENST00000353739 FBF1Q8TES7 1133 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 CKAP2Q8WWK9 683 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 MTBPQ96DY7 904 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 PRMT1Q99873 361 aaKnown RBP3.9□□□□□ -1.78
RNF38-203ENST00000353739 ZNF670Q9BS34 389 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 EPB41L4BQ9H329 900 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 RBPJLQ9UBG7 517 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 CAPN7Q9Y6W3 813 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 PTPRJQ12913 1337 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 SMCHD1A6NHR9 2005 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 A6NJR5 290 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 ZBTB42B2RXF5 422 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 TRDMT1O14717 391 aaKnown RBP3.9□□□□□ -1.78
RNF38-203ENST00000353739 MDM4O15151 490 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 ACSL3O95573 720 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 SHBGP04278 402 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 TROVE2P10155 538 aaKnown RBP eCLIP3.9□□□□□ -1.78
RNF38-203ENST00000353739 SDC4P31431 198 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 MSH2P43246 934 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 SERPINB9P50453 376 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 BCAT1P54687 386 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 IFT88Q13099 833 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 PRKG1Q13976 671 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 R3HDM1Q15032 1099 aaKnown RBP3.9□□□□□ -1.78
RNF38-203ENST00000353739 TMED2Q15363 201 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 CCDC38Q502W7 563 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 RNASEH2BQ5TBB1 312 aaKnown RBP3.9□□□□□ -1.78
RNF38-203ENST00000353739 HHATQ5VTY9 493 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 KAZNQ674X7 775 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 TTC19Q6DKK2 380 aaPredicted RBP3.9□□□□□ -1.78
RNF38-203ENST00000353739 SCARA5Q6ZMJ2 495 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 ILDR2Q71H61 639 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 PLEKHH3Q7Z736 793 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 RPAINQ86UA6 219 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 SLC35B2Q8TB61 432 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 RAB3IL1Q8TBN0 382 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 PYROXD1Q8WU10 500 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 PRCCQ92733 491 aaPredicted RBP3.9□□□□□ -1.78
RNF38-203ENST00000353739 TNIP3Q96KP6 325 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 PDGFDQ9GZP0 370 aaPredicted RBP3.9□□□□□ -1.78
RNF38-203ENST00000353739 XYLT2Q9H1B5 865 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 SNX25Q9H3E2 840 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 FAM96AQ9H5X1 160 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 PNPLA8Q9NP80 782 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.9□□□□□ -1.782e-7■■■■■ 106.2
RNF38-203ENST00000353739 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.9□□□□□ -1.78
RNF38-203ENST00000353739 RRN3Q9NYV6 651 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 NXF1Q9UBU9 619 aaKnown RBP3.9□□□□□ -1.78
RNF38-203ENST00000353739 STARD13Q9Y3M8 1113 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 NR2E1Q9Y466 385 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 SF3B1O75533 1304 aaKnown RBP eCLIP3.9□□□□□ -1.782e-7■■■■■ 53.5
RNF38-203ENST00000353739 NRCAMQ92823 1304 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 PLXNA1Q9UIW2 1896 aa3.9□□□□□ -1.78
RNF38-203ENST00000353739 SMIM23A6NLE4 172 aa3.9□□□□□ -1.79
RNF38-203ENST00000353739 M0QZ92 97 aa3.9□□□□□ -1.79
RNF38-203ENST00000353739 SOCS7O14512 581 aa3.9□□□□□ -1.79
RNF38-203ENST00000353739 TSPAN1O60635 241 aa3.9□□□□□ -1.79
RNF38-203ENST00000353739 CXCL8P10145 99 aa3.9□□□□□ -1.79
RNF38-203ENST00000353739 INSRRP14616 1297 aa3.9□□□□□ -1.79
RNF38-203ENST00000353739 BRAFP15056 766 aa3.9□□□□□ -1.79
RNF38-203ENST00000353739 FDFT1P37268 417 aa3.9□□□□□ -1.79
RNF38-203ENST00000353739 PTPN9P43378 593 aa3.9□□□□□ -1.79
RNF38-203ENST00000353739 EIF3EP60228 445 aaKnown RBP3.9□□□□□ -1.79
RNF38-203ENST00000353739 BST2Q10589 180 aaKnown RBP3.9□□□□□ -1.79
RNF38-203ENST00000353739 OASLQ15646 514 aaKnown RBP3.9□□□□□ -1.79
RNF38-203ENST00000353739 ZRSR2Q15696 482 aaKnown RBP3.9□□□□□ -1.79
RNF38-203ENST00000353739 SNCBQ16143 134 aa3.9□□□□□ -1.79
RNF38-203ENST00000353739 GOLGA7BQ2TAP0 167 aa3.9□□□□□ -1.79
RNF38-203ENST00000353739 WDR72Q3MJ13 1102 aa3.9□□□□□ -1.79
RNF38-203ENST00000353739 CCDC14Q49A88 953 aa3.9□□□□□ -1.79
RNF38-203ENST00000353739 DUSP28Q4G0W2 176 aa3.9□□□□□ -1.79
RNF38-203ENST00000353739 EFHC1Q5JVL4 640 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms