RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 GTF2BQ00403 316 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 CUL3Q13618 768 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 UBAP2LQ14157 1087 aaKnown RBP18.86■□□□□ 0.61
CTSB-202ENST00000353047 PDK4Q16654 411 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 MSS51Q4VC12 460 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 ZNF516Q92618 1163 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 PTPRN2Q92932 1015 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 PGBD4Q96DM1 585 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 SLITRK1Q96PX8 696 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 SH3GL3Q99963 347 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 DHX35Q9H5Z1 703 aaKnown RBP18.86■□□□□ 0.61
CTSB-202ENST00000353047 CYP26B1Q9NR63 512 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 RIPK3Q9Y572 518 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 ADGRA3Q8IWK6 1321 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 GOLGA8QA0A0J9YX86 632 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 GOLGA8OA6NCC3 632 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 GOLGA8NF8WBI6 632 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 PEX11AO75192 247 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 RPL22P35268 128 aaKnown RBP18.86■□□□□ 0.61
CTSB-202ENST00000353047 CAP2P40123 477 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 PAPOLAP51003 745 aaKnown RBP18.86■□□□□ 0.61
CTSB-202ENST00000353047 C15orf59Q2T9L4 293 aaPredicted RBP18.86■□□□□ 0.61
CTSB-202ENST00000353047 RNF43Q68DV7 783 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 PPIL6Q8IXY8 311 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 DGAT1O75907 488 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 ASMTLO95671 621 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 WNT7BP56706 349 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 ASPHQ12797 758 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 ZNF667Q5HYK9 610 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 TMCO4Q5TGY1 634 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 LRRC74BQ6ZQY2 392 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 NIM1KQ8IY84 436 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 GALNT4Q8N4A0 578 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 NMD3Q96D46 503 aaKnown RBP18.86■□□□□ 0.61
CTSB-202ENST00000353047 APOBEC3GQ9HC16 384 aaKnown RBP18.86■□□□□ 0.61
CTSB-202ENST00000353047 ZNF302Q9NR11 478 aa18.86■□□□□ 0.61
CTSB-202ENST00000353047 HERC5Q9UII4 1024 aaKnown RBP18.86■□□□□ 0.61
CTSB-202ENST00000353047 PHKA2P46019 1235 aa18.85■□□□□ 0.61
CTSB-202ENST00000353047 GPC3P51654 580 aa18.85■□□□□ 0.61
CTSB-202ENST00000353047 NOMO3P69849 1222 aa18.85■□□□□ 0.61
CTSB-202ENST00000353047 PGM5Q15124 567 aa18.85■□□□□ 0.61
CTSB-202ENST00000353047 CRY2Q49AN0 593 aa18.85■□□□□ 0.61
CTSB-202ENST00000353047 KDELC2Q7Z4H8 507 aa18.85■□□□□ 0.61
CTSB-202ENST00000353047 WDR60Q8WVS4 1066 aa18.85■□□□□ 0.61
CTSB-202ENST00000353047 GRID1Q9ULK0 1009 aa18.85■□□□□ 0.61
CTSB-202ENST00000353047 EXTL3O43909 919 aa18.85■□□□□ 0.61
CTSB-202ENST00000353047 GM2AP17900 193 aa18.85■□□□□ 0.61
CTSB-202ENST00000353047 AMPD1P23109 780 aa18.85■□□□□ 0.61
CTSB-202ENST00000353047 ABL2P42684 1182 aa18.85■□□□□ 0.61
CTSB-202ENST00000353047 IFRD2Q12894 506 aaPredicted RBP18.85■□□□□ 0.61
CTSB-202ENST00000353047 ZC3H3Q8IXZ2 948 aaKnown RBP18.85■□□□□ 0.61
CTSB-202ENST00000353047 GSDMBQ8TAX9 411 aa18.85■□□□□ 0.61
CTSB-202ENST00000353047 UTP4Q969X6 686 aaKnown RBP18.85■□□□□ 0.61
CTSB-202ENST00000353047 E2F7Q96AV8 911 aa18.85■□□□□ 0.61
CTSB-202ENST00000353047 MBOAT7Q96N66 472 aa18.85■□□□□ 0.61
CTSB-202ENST00000353047 MMP19Q99542 508 aa18.85■□□□□ 0.61
CTSB-202ENST00000353047 BTBD10Q9BSF8 475 aa18.85■□□□□ 0.61
CTSB-202ENST00000353047 CADM1Q9BY67 442 aaKnown RBP18.85■□□□□ 0.61
CTSB-202ENST00000353047 PSTPIP1O43586 416 aa18.85■□□□□ 0.61
CTSB-202ENST00000353047 ZNF862O60290 1169 aa18.85■□□□□ 0.61
CTSB-202ENST00000353047 ICAM1P05362 532 aa18.85■□□□□ 0.61
CTSB-202ENST00000353047 MRPS35P82673 323 aaKnown RBP18.85■□□□□ 0.61
CTSB-202ENST00000353047 SAMD7Q7Z3H4 446 aa18.85■□□□□ 0.61
CTSB-202ENST00000353047 DNAAF3Q8N9W5 541 aa18.85■□□□□ 0.61
CTSB-202ENST00000353047 SCYL1Q96KG9 808 aa18.85■□□□□ 0.61
CTSB-202ENST00000353047 GJD4Q96KN9 370 aaPredicted RBP18.85■□□□□ 0.61
CTSB-202ENST00000353047 SYT15Q9BQS2 421 aa18.85■□□□□ 0.61
CTSB-202ENST00000353047 COL18A1P39060 1754 aa18.84■□□□□ 0.61
CTSB-202ENST00000353047 AIM2O14862 343 aa18.84■□□□□ 0.61
CTSB-202ENST00000353047 LYPLA1O75608 230 aaPredicted RBP18.84■□□□□ 0.61
CTSB-202ENST00000353047 SPATA24Q86W54 205 aa18.84■□□□□ 0.61
CTSB-202ENST00000353047 SRPK1Q96SB4 655 aaKnown RBP18.84■□□□□ 0.61
CTSB-202ENST00000353047 RIPK1Q13546 671 aa18.84■□□□□ 0.61
CTSB-202ENST00000353047 ACSBG2Q5FVE4 666 aa18.84■□□□□ 0.61
CTSB-202ENST00000353047 RINLQ6ZS11 566 aa18.84■□□□□ 0.61
CTSB-202ENST00000353047 RAPH1Q70E73 1250 aa18.84■□□□□ 0.61
CTSB-202ENST00000353047 ENOSF1Q7L5Y1 443 aa18.84■□□□□ 0.61
CTSB-202ENST00000353047 SLC9A9Q8IVB4 645 aa18.84■□□□□ 0.61
CTSB-202ENST00000353047 MAP4K3Q8IVH8 894 aa18.84■□□□□ 0.61
CTSB-202ENST00000353047 CD101Q93033 1021 aa18.84■□□□□ 0.61
CTSB-202ENST00000353047 ANLNQ9NQW6 1124 aa18.84■□□□□ 0.61
CTSB-202ENST00000353047 MAN1C1Q9NR34 630 aa18.84■□□□□ 0.61
CTSB-202ENST00000353047 SENP1Q9P0U3 644 aa18.84■□□□□ 0.61
CTSB-202ENST00000353047 STARD13Q9Y3M8 1113 aa18.84■□□□□ 0.61
CTSB-202ENST00000353047 ANO7Q6IWH7 933 aa18.84■□□□□ 0.61
CTSB-202ENST00000353047 DENND1BQ6P3S1 775 aa18.84■□□□□ 0.61
CTSB-202ENST00000353047 ZBTB8OSQ8IWT0 167 aa18.84■□□□□ 0.61
CTSB-202ENST00000353047 CEP70Q8NHQ1 597 aa18.84■□□□□ 0.61
CTSB-202ENST00000353047 WNK4Q96J92 1243 aa18.84■□□□□ 0.61
CTSB-202ENST00000353047 CLMNQ96JQ2 1002 aa18.84■□□□□ 0.61
CTSB-202ENST00000353047 WRNIP1Q96S55 665 aa18.84■□□□□ 0.61
CTSB-202ENST00000353047 SLC17A6Q9P2U8 582 aa18.84■□□□□ 0.61
CTSB-202ENST00000353047 ANGPTL2Q9UKU9 493 aa18.84■□□□□ 0.61
CTSB-202ENST00000353047 UGT1A9O60656 530 aa18.83■□□□□ 0.61
CTSB-202ENST00000353047 DKC1O60832 514 aaKnown RBP eCLIP18.83■□□□□ 0.614e-14■■■■■ 34
CTSB-202ENST00000353047 ANKRD36BP1Q96IX9 119 aa18.83■□□□□ 0.61
CTSB-202ENST00000353047 UGT1A7Q9HAW7 530 aa18.83■□□□□ 0.61
CTSB-202ENST00000353047 UGT1A10Q9HAW8 530 aa18.83■□□□□ 0.61
CTSB-202ENST00000353047 UGT1A8Q9HAW9 530 aa18.83■□□□□ 0.61
CTSB-202ENST00000353047 APOBEC2Q9Y235 224 aaKnown RBP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms