RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 PLOD1Q02809 727 aaPredicted RBP16.04■□□□□ 0.16
LMNA-201ENST00000347559 AP3B2Q13367 1082 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 CHI3L2Q15782 390 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 CDHR3Q6ZTQ4 885 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 LARGE2Q8N3Y3 721 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 TAS1R2Q8TE23 839 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 MZB1Q8WU39 189 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 APOPT1Q96IL0 206 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 CNBD2Q96M20 576 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 ACSS3Q9H6R3 686 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 ZDHHC7Q9NXF8 308 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 BTG4Q9NY30 223 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 KCNK4Q9NYG8 393 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 STRIP2Q9ULQ0 834 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 PAIP2BQ9ULR5 123 aaKnown RBP16.04■□□□□ 0.16
LMNA-201ENST00000347559 CYB561D2O14569 222 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 ADRB2P07550 413 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 GTF2H1P32780 548 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 ETV4P43268 484 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 NCKAP1LP55160 1127 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 TLR1Q15399 786 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 MYLK3Q32MK0 819 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 MAP3K21Q5TCX8 1036 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 CTAGE3PQ8IX95 158 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 GAB3Q8WWW8 586 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 HEMK1Q9Y5R4 338 aaPredicted RBP16.03■□□□□ 0.16
LMNA-201ENST00000347559 DDX60LQ5H9U9 1706 aaKnown RBP16.03■□□□□ 0.16
LMNA-201ENST00000347559 DKC1O60832 514 aaKnown RBP eCLIP16.03■□□□□ 0.16
LMNA-201ENST00000347559 FAM155BO75949 473 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 STIP1P31948 543 aaKnown RBP16.03■□□□□ 0.16
LMNA-201ENST00000347559 MTA1Q13330 715 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 SLC44A4Q53GD3 710 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 MOXD1Q6UVY6 613 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 ZCCHC23Q6ZST2 131 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 TSHZ1Q6ZSZ6 1077 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 DENND5BQ6ZUT9 1274 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 SLC9A9Q8IVB4 645 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 SEPT12Q8IYM1 358 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 HELQQ8TDG4 1101 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 PRPF18Q99633 342 aaKnown RBP16.03■□□□□ 0.16
LMNA-201ENST00000347559 MRPL1Q9BYD6 325 aaKnown RBP16.03■□□□□ 0.16
LMNA-201ENST00000347559 PPCSQ9HAB8 311 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 PKD2L1Q9P0L9 805 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 PACSIN3Q9UKS6 424 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 INPP5FQ9Y2H2 1132 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 IQANK1A0A1B0GTG1 560 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 NDC80O14777 642 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 P4HA2O15460 535 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 TBL3Q12788 808 aaKnown RBP16.03■□□□□ 0.16
LMNA-201ENST00000347559 PEX6Q13608 980 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 AAGABQ6PD74 315 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 TMC7Q7Z402 723 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 CHSY1Q86X52 802 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 EXD1Q8NHP7 514 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 SRPK1Q96SB4 655 aaKnown RBP16.03■□□□□ 0.16
LMNA-201ENST00000347559 FAF1Q9UNN5 650 aaPredicted RBP16.03■□□□□ 0.16
LMNA-201ENST00000347559 SHOC2Q9UQ13 582 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 DTNAQ9Y4J8 743 aa16.03■□□□□ 0.16
LMNA-201ENST00000347559 NAV1Q8NEY1 1877 aa16.02■□□□□ 0.16
LMNA-201ENST00000347559 TLR3O15455 904 aaKnown RBP16.02■□□□□ 0.16
LMNA-201ENST00000347559 PSTPIP1O43586 416 aa16.02■□□□□ 0.16
LMNA-201ENST00000347559 PROCP04070 461 aa16.02■□□□□ 0.16
LMNA-201ENST00000347559 OATP04181 439 aa16.02■□□□□ 0.16
LMNA-201ENST00000347559 SERPINB8P50452 374 aa16.02■□□□□ 0.16
LMNA-201ENST00000347559 YWHAGP61981 247 aaKnown RBP eCLIP16.02■□□□□ 0.16
LMNA-201ENST00000347559 CCNIQ14094 377 aa16.02■□□□□ 0.16
LMNA-201ENST00000347559 KATNAL2Q8IYT4 538 aa16.02■□□□□ 0.16
LMNA-201ENST00000347559 ZBTB8BQ8NAP8 495 aaPredicted RBP16.02■□□□□ 0.16
LMNA-201ENST00000347559 POMGNT1Q8WZA1 660 aa16.02■□□□□ 0.16
LMNA-201ENST00000347559 E2F7Q96AV8 911 aa16.02■□□□□ 0.16
LMNA-201ENST00000347559 SH3GLB1Q9Y371 365 aa16.02■□□□□ 0.16
LMNA-201ENST00000347559 LOC100653049A0A140TA62 436 aa16.02■□□□□ 0.15
LMNA-201ENST00000347559 KRT34O76011 436 aa16.02■□□□□ 0.15
LMNA-201ENST00000347559 DHRS4L1P0CG22 281 aa16.02■□□□□ 0.15
LMNA-201ENST00000347559 PPIDQ08752 370 aaKnown RBP16.02■□□□□ 0.15
LMNA-201ENST00000347559 GK3PQ14409 553 aa16.02■□□□□ 0.15
LMNA-201ENST00000347559 NFIXQ14938 502 aa16.02■□□□□ 0.15
LMNA-201ENST00000347559 HSP90AA5PQ58FG0 334 aa16.02■□□□□ 0.15
LMNA-201ENST00000347559 MFSD14BQ5SR56 506 aa16.02■□□□□ 0.15
LMNA-201ENST00000347559 APOL6Q9BWW8 343 aa16.02■□□□□ 0.15
LMNA-201ENST00000347559 STK24Q9Y6E0 443 aa16.02■□□□□ 0.15
LMNA-201ENST00000347559 TCRBV7S3A2A0A539 114 aa16.01■□□□□ 0.15
LMNA-201ENST00000347559 GAS7O60861 476 aa16.01■□□□□ 0.15
LMNA-201ENST00000347559 CFHP08603 1231 aa16.01■□□□□ 0.15
LMNA-201ENST00000347559 SHROOM1Q2M3G4 852 aaPredicted RBP16.01■□□□□ 0.15
LMNA-201ENST00000347559 KBTBD12Q3ZCT8 623 aa16.01■□□□□ 0.15
LMNA-201ENST00000347559 CC2D2BQ6DHV5 1058 aa16.01■□□□□ 0.15
LMNA-201ENST00000347559 KLHL35Q6PF15 583 aa16.01■□□□□ 0.15
LMNA-201ENST00000347559 OTOP1Q7RTM1 612 aa16.01■□□□□ 0.15
LMNA-201ENST00000347559 HPS6Q86YV9 775 aa16.01■□□□□ 0.15
LMNA-201ENST00000347559 CRLF3Q8IUI8 442 aa16.01■□□□□ 0.15
LMNA-201ENST00000347559 CRYGNQ8WXF5 182 aa16.01■□□□□ 0.15
LMNA-201ENST00000347559 FAM81BQ96LP2 452 aa16.01■□□□□ 0.15
LMNA-201ENST00000347559 WDR83Q9BRX9 315 aaKnown RBP16.01■□□□□ 0.15
LMNA-201ENST00000347559 CCDC106Q9BWC9 280 aa16.01■□□□□ 0.15
LMNA-201ENST00000347559 ITGB4P16144 1822 aa16.01■□□□□ 0.15
LMNA-201ENST00000347559 UBE4BO95155 1302 aa16.01■□□□□ 0.15
LMNA-201ENST00000347559 SREBF1P36956 1147 aa16.01■□□□□ 0.15
LMNA-201ENST00000347559 FDFT1P37268 417 aa16.01■□□□□ 0.15
LMNA-201ENST00000347559 KRT39Q6A163 491 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms