RNA–Protein interactions for RNA: ENST00000346798.7

APP-201, Transcript of amyloid beta precursor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APP, Length 3,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-201ENST00000346798 RAB6CQ53S08 254 aa12.42□□□□□ -0.42
APP-201ENST00000346798 C1orf228Q6PIY5 440 aa12.42□□□□□ -0.42
APP-201ENST00000346798 MIPEPQ99797 713 aa12.42□□□□□ -0.42
APP-201ENST00000346798 RAB6CQ9H0N0 254 aa12.42□□□□□ -0.42
APP-201ENST00000346798 PORCNQ9H237 461 aa12.42□□□□□ -0.42
APP-201ENST00000346798 H0YCG3 227 aa12.41□□□□□ -0.42
APP-201ENST00000346798 MAGEB2O15479 319 aa12.41□□□□□ -0.42
APP-201ENST00000346798 LRCH4O75427 683 aa12.41□□□□□ -0.42
APP-201ENST00000346798 OATP04181 439 aa12.41□□□□□ -0.42
APP-201ENST00000346798 ITGAVP06756 1048 aa12.41□□□□□ -0.42
APP-201ENST00000346798 ARFIP2P53365 341 aa12.41□□□□□ -0.42
APP-201ENST00000346798 TGFB2P61812 414 aa12.41□□□□□ -0.42
APP-201ENST00000346798 FAAP100Q0VG06 881 aa12.41□□□□□ -0.42
APP-201ENST00000346798 PTK7Q13308 1070 aa12.41□□□□□ -0.42
APP-201ENST00000346798 CAPSQ13938 189 aa12.41□□□□□ -0.42
APP-201ENST00000346798 PIGHQ14442 188 aaPredicted RBP12.41□□□□□ -0.42
APP-201ENST00000346798 KBTBD12Q3ZCT8 623 aa12.41□□□□□ -0.42
APP-201ENST00000346798 DARS2Q6PI48 645 aaKnown RBP12.41□□□□□ -0.42
APP-201ENST00000346798 PPM1NQ8N819 430 aa12.41□□□□□ -0.42
APP-201ENST00000346798 SPATA18Q8TC71 538 aa12.41□□□□□ -0.42
APP-201ENST00000346798 PRPF31Q8WWY3 499 aaKnown RBP12.41□□□□□ -0.42
APP-201ENST00000346798 MECRQ9BV79 373 aa12.41□□□□□ -0.42
APP-201ENST00000346798 TRIM55Q9BYV6 548 aa12.41□□□□□ -0.42
APP-201ENST00000346798 SLC13A1Q9BZW2 595 aa12.41□□□□□ -0.42
APP-201ENST00000346798 SLC24A2Q9UI40 661 aa12.41□□□□□ -0.42
APP-201ENST00000346798 GYG2O15488 501 aa12.41□□□□□ -0.42
APP-201ENST00000346798 ZWINTO95229 277 aa12.41□□□□□ -0.42
APP-201ENST00000346798 ITGBL1O95965 494 aaPredicted RBP12.41□□□□□ -0.42
APP-201ENST00000346798 INHBAP08476 426 aa12.41□□□□□ -0.42
APP-201ENST00000346798 CLDN10P78369 228 aa12.41□□□□□ -0.42
APP-201ENST00000346798 MCL1Q07820 350 aa12.41□□□□□ -0.42
APP-201ENST00000346798 RCN2Q14257 317 aa12.41□□□□□ -0.42
APP-201ENST00000346798 TMEM132BQ14DG7 1078 aa12.41□□□□□ -0.42
APP-201ENST00000346798 EFHC2Q5JST6 749 aa12.41□□□□□ -0.42
APP-201ENST00000346798 SH3PXD2AQ5TCZ1 1133 aa12.41□□□□□ -0.42
APP-201ENST00000346798 TRIM50Q86XT4 487 aa12.41□□□□□ -0.42
APP-201ENST00000346798 TDRPQ86YL5 185 aa12.41□□□□□ -0.42
APP-201ENST00000346798 SERAC1Q96JX3 654 aa12.41□□□□□ -0.42
APP-201ENST00000346798 IQCGQ9H095 443 aaKnown RBP12.41□□□□□ -0.42
APP-201ENST00000346798 KANSL3Q9P2N6 904 aa12.41□□□□□ -0.42
APP-201ENST00000346798 DRG1Q9Y295 367 aaKnown RBP12.41□□□□□ -0.42
APP-201ENST00000346798 KBTBD13C9JR72 458 aa12.41□□□□□ -0.42
APP-201ENST00000346798 H7C0C1 242 aa12.41□□□□□ -0.42
APP-201ENST00000346798 LDHAP00338 332 aaKnown RBP12.41□□□□□ -0.42
APP-201ENST00000346798 ASS1P00966 412 aaKnown RBP12.41□□□□□ -0.42
APP-201ENST00000346798 ATP5OP48047 213 aa12.41□□□□□ -0.42
APP-201ENST00000346798 ARFGAP1Q8N6T3 406 aa12.41□□□□□ -0.42
APP-201ENST00000346798 RDM1Q8NG50 284 aa12.41□□□□□ -0.42
APP-201ENST00000346798 SLC35B2Q8TB61 432 aa12.41□□□□□ -0.42
APP-201ENST00000346798 TRIM56Q9BRZ2 755 aaKnown RBP12.41□□□□□ -0.42
APP-201ENST00000346798 TMEM120AQ9BXJ8 343 aa12.41□□□□□ -0.42
APP-201ENST00000346798 NIF3L1Q9GZT8 377 aa12.41□□□□□ -0.42
APP-201ENST00000346798 ZNF395Q9H8N7 513 aaPredicted RBP12.41□□□□□ -0.42
APP-201ENST00000346798 CYTH4Q9UIA0 394 aa12.41□□□□□ -0.42
APP-201ENST00000346798 HEY1Q9Y5J3 304 aa12.41□□□□□ -0.42
APP-201ENST00000346798 KRT36O76013 467 aa12.4□□□□□ -0.42
APP-201ENST00000346798 PTPN4P29074 926 aa12.4□□□□□ -0.42
APP-201ENST00000346798 KPNB1Q14974 876 aaKnown RBP12.4□□□□□ -0.42
APP-201ENST00000346798 RCN1Q15293 331 aa12.4□□□□□ -0.42
APP-201ENST00000346798 PARP6Q2NL67 630 aa12.4□□□□□ -0.42
APP-201ENST00000346798 SCYL2Q6P3W7 929 aa12.4□□□□□ -0.42
APP-201ENST00000346798 RNF149Q8NC42 400 aa12.4□□□□□ -0.42
APP-201ENST00000346798 NKD2Q969F2 451 aaPredicted RBP12.4□□□□□ -0.42
APP-201ENST00000346798 WRNIP1Q96S55 665 aa12.4□□□□□ -0.42
APP-201ENST00000346798 CADM1Q9BY67 442 aaKnown RBP12.4□□□□□ -0.42
APP-201ENST00000346798 PPP1R12CQ9BZL4 782 aa12.4□□□□□ -0.42
APP-201ENST00000346798 BATF3Q9NR55 127 aa12.4□□□□□ -0.42
APP-201ENST00000346798 PPP1R1BQ9UD71 204 aaPredicted RBP12.4□□□□□ -0.42
APP-201ENST00000346798 FAM237BA0A1B0GVD1 139 aa12.4□□□□□ -0.42
APP-201ENST00000346798 NAMPTP43490 491 aa12.4□□□□□ -0.42
APP-201ENST00000346798 BMPR2Q13873 1038 aa12.4□□□□□ -0.42
APP-201ENST00000346798 HADHQ16836 314 aaKnown RBP12.4□□□□□ -0.42
APP-201ENST00000346798 UBA3Q8TBC4 463 aa12.4□□□□□ -0.42
APP-201ENST00000346798 NLRP4Q96MN2 994 aa12.4□□□□□ -0.42
APP-201ENST00000346798 CPXM1Q96SM3 734 aa12.4□□□□□ -0.42
APP-201ENST00000346798 GPATCH2LQ9NWQ4 482 aa12.4□□□□□ -0.42
APP-201ENST00000346798 DDX56Q9NY93 547 aaKnown RBP12.4□□□□□ -0.42
APP-201ENST00000346798 GJA3Q9Y6H8 435 aa12.4□□□□□ -0.42
APP-201ENST00000346798 COL2A1P02458 1487 aaPredicted RBP12.4□□□□□ -0.42
APP-201ENST00000346798 C2CD2LO14523 706 aa12.39□□□□□ -0.43
APP-201ENST00000346798 MCF2LO15068 1137 aa12.39□□□□□ -0.43
APP-201ENST00000346798 KDELR1P24390 212 aa12.39□□□□□ -0.43
APP-201ENST00000346798 NBPF20Q3BBV1 942 aa12.39□□□□□ -0.43
APP-201ENST00000346798 SLC45A4Q5BKX6 768 aa12.39□□□□□ -0.43
APP-201ENST00000346798 INPP5DQ92835 1189 aa12.39□□□□□ -0.43
APP-201ENST00000346798 ACSS3Q9H6R3 686 aa12.39□□□□□ -0.43
APP-201ENST00000346798 FARP1Q9Y4F1 1045 aaPredicted RBP12.39□□□□□ -0.43
APP-201ENST00000346798 SNCAIPQ9Y6H5 919 aa12.39□□□□□ -0.43
APP-201ENST00000346798 TCRBV9S1A1TA0A576 114 aa12.39□□□□□ -0.43
APP-201ENST00000346798 INO80B-WBP1J3KQ70 363 aa12.39□□□□□ -0.43
APP-201ENST00000346798 SMNDC1O75940 238 aaKnown RBP eCLIP12.39□□□□□ -0.43
APP-201ENST00000346798 MYL2P10916 166 aa12.39□□□□□ -0.43
APP-201ENST00000346798 ESRRAP11474 423 aaPredicted RBP12.39□□□□□ -0.43
APP-201ENST00000346798 DUOXA2Q1HG44 320 aa12.39□□□□□ -0.43
APP-201ENST00000346798 KLHL38Q2WGJ6 581 aa12.39□□□□□ -0.43
APP-201ENST00000346798 ALYREFQ86V81 257 aaKnown RBP12.39□□□□□ -0.43
APP-201ENST00000346798 NAT8LQ8N9F0 302 aa12.39□□□□□ -0.43
APP-201ENST00000346798 DCAKDQ8WVC6 231 aa12.39□□□□□ -0.43
APP-201ENST00000346798 TRAPPC12Q8WVT3 735 aa12.39□□□□□ -0.43
APP-201ENST00000346798 FAF2Q96CS3 445 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms