RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 GPR149Q86SP6 731 aa12.58□□□□□ -0.4
SNCA-202ENST00000345009 C12orf76Q8N812 135 aaPredicted RBP12.58□□□□□ -0.4
SNCA-202ENST00000345009 LEMD2Q8NC56 503 aa12.58□□□□□ -0.4
SNCA-202ENST00000345009 SMRP1Q8NCR6 262 aa12.58□□□□□ -0.4
SNCA-202ENST00000345009 PCED1BQ96HM7 432 aa12.58□□□□□ -0.4
SNCA-202ENST00000345009 ARID3AQ99856 593 aa12.58□□□□□ -0.4
SNCA-202ENST00000345009 HSD3B7Q9H2F3 369 aa12.58□□□□□ -0.4
SNCA-202ENST00000345009 PLCB1Q9NQ66 1216 aa12.58□□□□□ -0.4
SNCA-202ENST00000345009 CRTAC1Q9NQ79 661 aa12.58□□□□□ -0.4
SNCA-202ENST00000345009 A0A0C4DFX4 3053 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 CBFA2T2O43439 604 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 RFPL2O75678 378 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 SEC24AO95486 1093 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 FGF19O95750 216 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 BDNFP23560 247 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 USP8P40818 1118 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 UBASH3AP57075 661 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 BPIFB4P59827 614 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 FANCCQ00597 558 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 TWF1Q12792 350 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 CBX2Q14781 532 aaPredicted RBP12.57□□□□□ -0.4
SNCA-202ENST00000345009 STILQ15468 1287 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 ZNF394Q53GI3 561 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 CYP4A22Q5TCH4 519 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 KLHDC7AQ5VTJ3 777 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 PTCRAQ6ISU1 281 aaPredicted RBP12.57□□□□□ -0.4
SNCA-202ENST00000345009 FMNL3Q8IVF7 1028 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 SCN4BQ8IWT1 228 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 NEK11Q8NG66 645 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 MYLPFQ96A32 169 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 CYFIP2Q96F07 1278 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 SMARCD1Q96GM5 515 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 ERGIC2Q96RQ1 377 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 PKMYT1Q99640 499 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 HNRNPABQ99729 332 aaKnown RBP12.57□□□□□ -0.4
SNCA-202ENST00000345009 APOL5Q9BWW9 433 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 LSM14BQ9BX40 385 aaKnown RBP12.57□□□□□ -0.4
SNCA-202ENST00000345009 S1PR5Q9H228 398 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 DPEP3Q9H4B8 488 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 TMLHEQ9NVH6 421 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 DNAJC12Q9UKB3 198 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 YIPF1Q9Y548 306 aa12.57□□□□□ -0.4
SNCA-202ENST00000345009 MTCL1Q9Y4B5 1905 aaKnown RBP12.56□□□□□ -0.4
SNCA-202ENST00000345009 A0A1B0GTH6 734 aa12.56□□□□□ -0.4
SNCA-202ENST00000345009 ZNF197O14709 1029 aa12.56□□□□□ -0.4
SNCA-202ENST00000345009 CCL16O15467 120 aa12.56□□□□□ -0.4
SNCA-202ENST00000345009 MED7O43513 233 aa12.56□□□□□ -0.4
SNCA-202ENST00000345009 HCRTO43612 131 aa12.56□□□□□ -0.4
SNCA-202ENST00000345009 PAPLNO95428 1278 aa12.56□□□□□ -0.4
SNCA-202ENST00000345009 FAM200BP0CF97 657 aa12.56□□□□□ -0.4
SNCA-202ENST00000345009 CSH1P0DML2 217 aa12.56□□□□□ -0.4
SNCA-202ENST00000345009 CSH2P0DML3 217 aa12.56□□□□□ -0.4
SNCA-202ENST00000345009 VDRP11473 427 aa12.56□□□□□ -0.4
SNCA-202ENST00000345009 UCHL3P15374 230 aa12.56□□□□□ -0.4
SNCA-202ENST00000345009 CD19P15391 556 aa12.56□□□□□ -0.4
SNCA-202ENST00000345009 CYP2F1P24903 491 aa12.56□□□□□ -0.4
SNCA-202ENST00000345009 RAD23BP54727 409 aa12.56□□□□□ -0.4
SNCA-202ENST00000345009 RAPGEF1Q13905 1077 aa12.56□□□□□ -0.4
SNCA-202ENST00000345009 SYCP1Q15431 976 aa12.56□□□□□ -0.4
SNCA-202ENST00000345009 ARHGAP44Q17R89 818 aa12.56□□□□□ -0.4
SNCA-202ENST00000345009 SGO2Q562F6 1265 aa12.56□□□□□ -0.4
SNCA-202ENST00000345009 APTXQ7Z2E3 356 aaKnown RBP12.56□□□□□ -0.4
SNCA-202ENST00000345009 ARHGEF19Q8IW93 802 aa12.56□□□□□ -0.4
SNCA-202ENST00000345009 SLC4A11Q8NBS3 891 aa12.56□□□□□ -0.4
SNCA-202ENST00000345009 RNF214Q8ND24 703 aa12.56□□□□□ -0.4
SNCA-202ENST00000345009 SLC2A14Q8TDB8 520 aa12.56□□□□□ -0.4
SNCA-202ENST00000345009 SPAG5Q96R06 1193 aa12.56□□□□□ -0.4
SNCA-202ENST00000345009 B3GNT5Q9BYG0 378 aa12.56□□□□□ -0.4
SNCA-202ENST00000345009 STK33Q9BYT3 514 aa12.56□□□□□ -0.4
SNCA-202ENST00000345009 ASAH2Q9NR71 780 aa12.56□□□□□ -0.4
SNCA-202ENST00000345009 FAM207AQ9NSI2 230 aaPredicted RBP12.56□□□□□ -0.4
SNCA-202ENST00000345009 HESX1Q9UBX0 185 aa12.56□□□□□ -0.4
SNCA-202ENST00000345009 USP15Q9Y4E8 981 aaPredicted RBP12.56□□□□□ -0.4
SNCA-202ENST00000345009 MBTPS2O43462 519 aa12.55□□□□□ -0.4
SNCA-202ENST00000345009 AP1G2O75843 785 aa12.55□□□□□ -0.4
SNCA-202ENST00000345009 ACO1P21399 889 aaKnown RBP12.55□□□□□ -0.4
SNCA-202ENST00000345009 TFF2Q03403 129 aa12.55□□□□□ -0.4
SNCA-202ENST00000345009 PTK2Q05397 1052 aa12.55□□□□□ -0.4
SNCA-202ENST00000345009 KCNMA1Q12791 1236 aa12.55□□□□□ -0.4
SNCA-202ENST00000345009 PABPC1LQ4VXU2 614 aaKnown RBP12.55□□□□□ -0.4
SNCA-202ENST00000345009 CACNA2D4Q7Z3S7 1137 aa12.55□□□□□ -0.4
SNCA-202ENST00000345009 DNAJB7Q7Z6W7 309 aaPredicted RBP12.55□□□□□ -0.4
SNCA-202ENST00000345009 C12orf29Q8N999 325 aa12.55□□□□□ -0.4
SNCA-202ENST00000345009 RBBP8NLQ8NC74 664 aaPredicted RBP12.55□□□□□ -0.4
SNCA-202ENST00000345009 WHAMMQ8TF30 809 aa12.55□□□□□ -0.4
SNCA-202ENST00000345009 PSMG2Q969U7 264 aa12.55□□□□□ -0.4
SNCA-202ENST00000345009 SPATA17Q96L03 361 aa12.55□□□□□ -0.4
SNCA-202ENST00000345009 C8orf48Q96LL4 319 aa12.55□□□□□ -0.4
SNCA-202ENST00000345009 KREMEN1Q96MU8 473 aa12.55□□□□□ -0.4
SNCA-202ENST00000345009 ASB2Q96Q27 587 aa12.55□□□□□ -0.4
SNCA-202ENST00000345009 GCNAQ96QF7 691 aa12.55□□□□□ -0.4
SNCA-202ENST00000345009 NUP58Q9BVL2 599 aa12.55□□□□□ -0.4
SNCA-202ENST00000345009 WDR6Q9NNW5 1121 aaKnown RBP12.55□□□□□ -0.4
SNCA-202ENST00000345009 DMAP1Q9NPF5 467 aaPredicted RBP12.55□□□□□ -0.4
SNCA-202ENST00000345009 PRDM6Q9NQX0 595 aa12.55□□□□□ -0.4
SNCA-202ENST00000345009 FAM49BQ9NUQ9 324 aa12.55□□□□□ -0.4
SNCA-202ENST00000345009 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.55□□□□□ -0.4
SNCA-202ENST00000345009 UXTQ9UBK9 157 aaPredicted RBP12.55□□□□□ -0.4
SNCA-202ENST00000345009 HMGXB4Q9UGU5 601 aa12.55□□□□□ -0.4
SNCA-202ENST00000345009 CNTN6Q9UQ52 1028 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms