RNA–Protein interactions for RNA: ENST00000337273.9

TNPO1-201, Transcript of transportin 1, humanhuman

TSL 1 (best) BASIC

Gene TNPO1, Length 11,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-201ENST00000337273 RCN1Q15293 331 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 CARTPTQ16568 116 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 TFDP3Q5H9I0 405 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 PCNX4Q63HM2 1172 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 MOXD1Q6UVY6 613 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 SCUBE1Q8IWY4 988 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 CNDP1Q96KN2 507 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 CEP44Q9C0F1 390 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 TDP2O95551 362 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 ACAD10Q6JQN1 1059 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 TIGD7Q6NT04 549 aaPredicted RBP8.33□□□□□ -1.08
TNPO1-201ENST00000337273 CCDC103Q8IW40 242 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 SVOPQ8N4V2 548 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 AFG1LQ8WV93 481 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 PAPOLBQ9NRJ5 636 aaKnown RBP8.33□□□□□ -1.08
TNPO1-201ENST00000337273 TRIM49P0CI25 452 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 TRIM49CP0CI26 452 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 PTGER2P43116 358 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 SERPINB8P50452 374 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 SLC9A5Q14940 896 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 TRIP4Q15650 581 aaPredicted RBP8.33□□□□□ -1.08
TNPO1-201ENST00000337273 SV2CQ496J9 727 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 EPS8L3Q8TE67 593 aaKnown RBP8.33□□□□□ -1.08
TNPO1-201ENST00000337273 TRAPPC9Q96Q05 1148 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 NT5C1AQ9BXI3 368 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 RERGLQ9H628 205 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 ANKEF1Q9NU02 776 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 LSM7Q9UK45 103 aaKnown RBP8.33□□□□□ -1.08
TNPO1-201ENST00000337273 AIM2O14862 343 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 CACHD1Q5VU97 1274 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 LRRC8DQ7L1W4 858 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 SLC13A5Q86YT5 568 aaPredicted RBP8.33□□□□□ -1.08
TNPO1-201ENST00000337273 POP5Q969H6 163 aaKnown RBP8.33□□□□□ -1.08
TNPO1-201ENST00000337273 REEP2Q9BRK0 252 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.33□□□□□ -1.08
TNPO1-201ENST00000337273 C1DQ13901 141 aaKnown RBP8.33□□□□□ -1.08
TNPO1-201ENST00000337273 C6orf10Q5SRN2 563 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 RAD9BQ6WBX8 426 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 REXO1L1PQ8IX06 675 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 STKLD1Q8NE28 680 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 RNF17Q9BXT8 1623 aaKnown RBP8.33□□□□□ -1.08
TNPO1-201ENST00000337273 TRIM24O15164 1050 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 RBP3P10745 1247 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 ETS2P15036 469 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 DNAJB2P25686 324 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 KIF12Q96FN5 646 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 WNK4Q96J92 1243 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 UBE2OQ9C0C9 1292 aaKnown RBP8.33□□□□□ -1.08
TNPO1-201ENST00000337273 NARFQ9UHQ1 456 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 TAGLN3Q9UI15 199 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 SORCS3Q9UPU3 1222 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 MAGI3Q5TCQ9 1506 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 ARAP3Q8WWN8 1544 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 MAGEB16A2A368 324 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 IMPDH2P12268 514 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 SESN2P58004 480 aaPredicted RBP8.33□□□□□ -1.08
TNPO1-201ENST00000337273 MYBPC2Q14324 1141 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 HIST2H2ACQ16777 129 aaPredicted RBP8.33□□□□□ -1.08
TNPO1-201ENST00000337273 HIST2H2AA3Q6FI13 130 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 SAPCD2Q86UD0 394 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 PIF1Q9H611 641 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 FAM153AQ9UHL3 310 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 METP08581 1390 aa8.33□□□□□ -1.08
TNPO1-201ENST00000337273 ZSCAN5CA6NGD5 496 aaPredicted RBP8.32□□□□□ -1.08
TNPO1-201ENST00000337273 SLC2A3P11169 496 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 TCF3P15923 654 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 COMTP21964 271 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 GARTP22102 1010 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 FGFR3P22607 806 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 C2CD6Q53TS8 623 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 CD302Q8IX05 232 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 TRIM8Q9BZR9 551 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 TMEM117Q9H0C3 514 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 AP3M1Q9Y2T2 418 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 SNUPNO95149 360 aaKnown RBP8.32□□□□□ -1.08
TNPO1-201ENST00000337273 ALDH1A1P00352 501 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 IFNA14P01570 189 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 SYTL3Q4VX76 610 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 KLHDC7AQ5VTJ3 777 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 RNF146Q9NTX7 359 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 DUSP10Q9Y6W6 482 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 TNFAIP8O95379 198 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 CHI3L2Q15782 390 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 THEMIS2Q5TEJ8 643 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 MRNIPQ6NTE8 343 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 TRIM65Q6PJ69 517 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 MSL3Q8N5Y2 521 aaKnown RBP8.32□□□□□ -1.08
TNPO1-201ENST00000337273 TFB1MQ8WVM0 346 aaKnown RBP8.32□□□□□ -1.08
TNPO1-201ENST00000337273 GANQ9H2C0 597 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 SAR1AQ9NR31 198 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 LRCH1Q9Y2L9 728 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 CFAP99D6REC4 459 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 NPHP4O75161 1426 aaPredicted RBP8.32□□□□□ -1.08
TNPO1-201ENST00000337273 RAD23AP54725 363 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 VCPP55072 806 aaKnown RBP8.32□□□□□ -1.08
TNPO1-201ENST00000337273 CHRNB3Q05901 458 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 HDDC2Q7Z4H3 204 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 SPATA2LQ8IUW3 424 aaPredicted RBP8.32□□□□□ -1.08
TNPO1-201ENST00000337273 PPP2R3CQ969Q6 453 aa8.32□□□□□ -1.08
TNPO1-201ENST00000337273 ZSWIM1Q9BR11 485 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms