RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 NSL1Q96IY1 281 aa11.9□□□□□ -0.5
SCLT1-201ENST00000281142 ZIC5Q96T25 663 aa11.9□□□□□ -0.5
SCLT1-201ENST00000281142 TMEM121Q9BTD3 319 aa11.9□□□□□ -0.5
SCLT1-201ENST00000281142 TMEM206Q9H813 350 aa11.9□□□□□ -0.5
SCLT1-201ENST00000281142 PSMC3IPQ9P2W1 217 aaPredicted RBP11.9□□□□□ -0.5
SCLT1-201ENST00000281142 A0A0G2JMZ2 1700 aa11.9□□□□□ -0.5
SCLT1-201ENST00000281142 E5RJQ4 531 aa11.9□□□□□ -0.5
SCLT1-201ENST00000281142 IPO5O00410 1097 aaKnown RBP11.9□□□□□ -0.5
SCLT1-201ENST00000281142 USP1O94782 785 aa11.9□□□□□ -0.5
SCLT1-201ENST00000281142 LMNAP02545 664 aaKnown RBP11.9□□□□□ -0.5
SCLT1-201ENST00000281142 TROVE2P10155 538 aaKnown RBP eCLIP11.9□□□□□ -0.5
SCLT1-201ENST00000281142 MYBPC2Q14324 1141 aa11.9□□□□□ -0.5
SCLT1-201ENST00000281142 PDCD7Q8N8D1 485 aaKnown RBP11.9□□□□□ -0.5
SCLT1-201ENST00000281142 CHURC1Q8WUH1 139 aa11.9□□□□□ -0.5
SCLT1-201ENST00000281142 VTI1AQ96AJ9 217 aa11.9□□□□□ -0.5
SCLT1-201ENST00000281142 ARHGEF4Q9NR80 690 aa11.9□□□□□ -0.5
SCLT1-201ENST00000281142 ETS2P15036 469 aa11.9□□□□□ -0.51
SCLT1-201ENST00000281142 GLRA2P23416 452 aa11.9□□□□□ -0.51
SCLT1-201ENST00000281142 ARFIP2P53365 341 aa11.9□□□□□ -0.51
SCLT1-201ENST00000281142 RPL7AP62424 266 aaKnown RBP11.9□□□□□ -0.51
SCLT1-201ENST00000281142 C1QTNF12Q5T7M4 302 aa11.9□□□□□ -0.51
SCLT1-201ENST00000281142 FAM160B2Q86V87 743 aa11.9□□□□□ -0.51
SCLT1-201ENST00000281142 RHOT1Q8IXI2 618 aa11.9□□□□□ -0.51
SCLT1-201ENST00000281142 FBXL13Q8NEE6 735 aa11.9□□□□□ -0.51
SCLT1-201ENST00000281142 TRAPPC9Q96Q05 1148 aa11.9□□□□□ -0.51
SCLT1-201ENST00000281142 RABGEF1Q9UJ41 708 aa11.9□□□□□ -0.51
SCLT1-201ENST00000281142 BTBD19C9JJ37 291 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 BGNP21810 368 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 SLC1A1P43005 524 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 RARRES1P49788 294 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 GPC3P51654 580 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 AP1B1Q10567 949 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 NFX1Q12986 1120 aaKnown RBP11.89□□□□□ -0.51
SCLT1-201ENST00000281142 SEPT7Q16181 437 aaKnown RBP11.89□□□□□ -0.51
SCLT1-201ENST00000281142 CCDC142Q17RM4 750 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 FNBP1LQ5T0N5 605 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 SYCP2LQ5T4T6 812 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 RNASEH2BQ5TBB1 312 aaKnown RBP11.89□□□□□ -0.51
SCLT1-201ENST00000281142 PLA2G4FQ68DD2 849 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 SKA1Q96BD8 255 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 ATG4CQ96DT6 458 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 FAM161BQ96MY7 647 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 PLEKHG4BQ96PX9 1271 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 TUBGCP5Q96RT8 1024 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 TEKT3Q9BXF9 490 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 NMUR2Q9GZQ4 415 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 MANSC1Q9H8J5 431 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 FAM237BA0A1B0GVD1 139 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 ITGB5P18084 799 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 NSFP46459 744 aaKnown RBP11.89□□□□□ -0.51
SCLT1-201ENST00000281142 NRLP54845 237 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 ARL4CP56559 192 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 DYNC1I2Q13409 638 aaKnown RBP11.89□□□□□ -0.51
SCLT1-201ENST00000281142 UGCGQ16739 394 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 SCARA3Q6AZY7 606 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 B3GNT9Q6UX72 402 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 MON1BQ7L1V2 547 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 RBM12BQ8IXT5 1001 aaKnown RBP11.89□□□□□ -0.51
SCLT1-201ENST00000281142 SLC25A41Q8N5S1 370 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 STMN2Q93045 179 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 TTC17Q96AE7 1141 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 CYTH2Q99418 400 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 PAFAH2Q99487 392 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 TSSK1BQ9BXA7 367 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 ASCC2Q9H1I8 757 aaPredicted RBP11.89□□□□□ -0.51
SCLT1-201ENST00000281142 RANBP17Q9H2T7 1088 aaKnown RBP11.89□□□□□ -0.51
SCLT1-201ENST00000281142 SYNCQ9H7C4 482 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 ZNF395Q9H8N7 513 aaPredicted RBP11.89□□□□□ -0.51
SCLT1-201ENST00000281142 TMEM8AQ9HCN3 771 aa11.89□□□□□ -0.51
SCLT1-201ENST00000281142 TCRBV7S3A2A0A539 114 aa11.88□□□□□ -0.51
SCLT1-201ENST00000281142 DENND3A2RUS2 1198 aa11.88□□□□□ -0.51
SCLT1-201ENST00000281142 SPDYE16A6NNV3 312 aaPredicted RBP11.88□□□□□ -0.51
SCLT1-201ENST00000281142 ALOX15BO15296 676 aa11.88□□□□□ -0.51
SCLT1-201ENST00000281142 PEX10O60683 326 aa11.88□□□□□ -0.51
SCLT1-201ENST00000281142 ESRRAP11474 423 aaPredicted RBP11.88□□□□□ -0.51
SCLT1-201ENST00000281142 SLC18A1P54219 525 aa11.88□□□□□ -0.51
SCLT1-201ENST00000281142 WNT7BP56706 349 aa11.88□□□□□ -0.51
SCLT1-201ENST00000281142 MAMLD1Q13495 774 aa11.88□□□□□ -0.51
SCLT1-201ENST00000281142 ALCAMQ13740 583 aa11.88□□□□□ -0.51
SCLT1-201ENST00000281142 MYBPC3Q14896 1274 aa11.88□□□□□ -0.51
SCLT1-201ENST00000281142 DEFB115Q30KQ5 88 aa11.88□□□□□ -0.51
SCLT1-201ENST00000281142 EFHC2Q5JST6 749 aa11.88□□□□□ -0.51
SCLT1-201ENST00000281142 MIER3Q7Z3K6 550 aa11.88□□□□□ -0.51
SCLT1-201ENST00000281142 TREML1Q86YW5 311 aa11.88□□□□□ -0.51
SCLT1-201ENST00000281142 ALLCQ8N6M5 410 aa11.88□□□□□ -0.51
SCLT1-201ENST00000281142 IL31RAQ8NI17 732 aa11.88□□□□□ -0.51
SCLT1-201ENST00000281142 MZB1Q8WU39 189 aa11.88□□□□□ -0.51
SCLT1-201ENST00000281142 TRIM55Q9BYV6 548 aa11.88□□□□□ -0.51
SCLT1-201ENST00000281142 WDR11Q9BZH6 1224 aa11.88□□□□□ -0.51
SCLT1-201ENST00000281142 AVENQ9NQS1 362 aaPredicted RBP11.88□□□□□ -0.51
SCLT1-201ENST00000281142 KCND2Q9NZV8 630 aa11.88□□□□□ -0.51
SCLT1-201ENST00000281142 STX18Q9P2W9 335 aaKnown RBP11.88□□□□□ -0.51
SCLT1-201ENST00000281142 MYH9P35579 1960 aaKnown RBP11.88□□□□□ -0.51
SCLT1-201ENST00000281142 TESPA1A2RU30 521 aaPredicted RBP11.88□□□□□ -0.51
SCLT1-201ENST00000281142 VWA5AO00534 786 aa11.88□□□□□ -0.51
SCLT1-201ENST00000281142 FCHO1O14526 889 aa11.88□□□□□ -0.51
SCLT1-201ENST00000281142 MAP3K7O43318 606 aa11.88□□□□□ -0.51
SCLT1-201ENST00000281142 SPATA31D3P0C874 917 aa11.88□□□□□ -0.51
SCLT1-201ENST00000281142 POLR2MP0CAP2 368 aa11.88□□□□□ -0.51
SCLT1-201ENST00000281142 PGM1P36871 562 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms