RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 TRIM43BA6NCK2 446 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 CFHP08603 1231 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 ACTR3P61158 418 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 HIF1AQ16665 826 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 ABCB5Q2M3G0 1257 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 SMTNL2Q2TAL5 461 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 MYLK3Q32MK0 819 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 FNBP1LQ5T0N5 605 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 PPM1NQ8N819 430 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 DGCR14Q96DF8 476 aaKnown RBP13.41□□□□□ -0.26
HERC6-202ENST00000273960 ARMC7Q9H6L4 198 aa13.41□□□□□ -0.26
HERC6-202ENST00000273960 ATF5Q9Y2D1 282 aaPredicted RBP13.41□□□□□ -0.26
HERC6-202ENST00000273960 RBM47A0AV96 593 aaKnown RBP13.4□□□□□ -0.26
HERC6-202ENST00000273960 F5H423 210 aaPredicted RBP13.4□□□□□ -0.26
HERC6-202ENST00000273960 TBC1D12O60347 775 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 LYPLA1O75608 230 aaPredicted RBP13.4□□□□□ -0.26
HERC6-202ENST00000273960 MAP3K6O95382 1288 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 KRT1P04264 644 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 RPA1P27694 616 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 NAA20P61599 178 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 CAV1Q03135 178 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 BST1Q10588 318 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 PTK7Q13308 1070 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 KLHL35Q6PF15 583 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 CDHR3Q6ZTQ4 885 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 ZC3H3Q8IXZ2 948 aaKnown RBP13.4□□□□□ -0.26
HERC6-202ENST00000273960 METTL25Q8N6Q8 603 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 S100A14Q9HCY8 104 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 EURLQ9NYK6 297 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 GTF3C4Q9UKN8 822 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 RBMX2Q9Y388 322 aaKnown RBP13.4□□□□□ -0.26
HERC6-202ENST00000273960 GTPBP10A4D1E9 387 aaKnown RBP13.4□□□□□ -0.26
HERC6-202ENST00000273960 A8MXQ7 604 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 CFLARO15519 480 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 TPD52L2O43399 206 aaKnown RBP13.4□□□□□ -0.26
HERC6-202ENST00000273960 AVILO75366 819 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 PENKP01210 267 aaPredicted RBP13.4□□□□□ -0.26
HERC6-202ENST00000273960 CIITAP33076 1130 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 PRKG1Q13976 671 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 CNGA3Q16281 694 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 TRMT5Q32P41 509 aaKnown RBP13.4□□□□□ -0.26
HERC6-202ENST00000273960 C6orf52Q5T4I8 152 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 ZNF554Q86TJ5 538 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 TRIM50Q86XT4 487 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 PDSS2Q86YH6 399 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 KIFC3Q9BVG8 833 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 ACSS2Q9NR19 701 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 TCRBV7S3A2A0A539 114 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 MSH4O15457 936 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 TM7SF2O76062 418 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 ZBTB7AO95365 584 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 TCN1P20061 433 aaPredicted RBP13.4□□□□□ -0.26
HERC6-202ENST00000273960 CRABP2P29373 138 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 NCKAP1LP55160 1127 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 TLR1Q15399 786 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 EFHC1Q5JVL4 640 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 GRAMD4Q6IC98 578 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 KLC3Q6P597 504 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 PTAR1Q7Z6K3 402 aaPredicted RBP13.4□□□□□ -0.26
HERC6-202ENST00000273960 CBWD2Q8IUF1 395 aa13.4□□□□□ -0.26
HERC6-202ENST00000273960 PRMT6Q96LA8 375 aaPredicted RBP13.4□□□□□ -0.26
HERC6-202ENST00000273960 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.4□□□□□ -0.26
HERC6-202ENST00000273960 CTDP1Q9Y5B0 961 aaPredicted RBP13.4□□□□□ -0.26
HERC6-202ENST00000273960 ESYT2A0FGR8 921 aa13.39□□□□□ -0.27
HERC6-202ENST00000273960 TCEA3O75764 348 aa13.39□□□□□ -0.27
HERC6-202ENST00000273960 DGKIO75912 1065 aa13.39□□□□□ -0.27
HERC6-202ENST00000273960 INHBAP08476 426 aa13.39□□□□□ -0.27
HERC6-202ENST00000273960 PDGFRBP09619 1106 aa13.39□□□□□ -0.27
HERC6-202ENST00000273960 MAPK10P53779 464 aa13.39□□□□□ -0.27
HERC6-202ENST00000273960 MAP3K10Q02779 954 aa13.39□□□□□ -0.27
HERC6-202ENST00000273960 TMCO4Q5TGY1 634 aa13.39□□□□□ -0.27
HERC6-202ENST00000273960 APOBEC3HQ6NTF7 200 aaKnown RBP13.39□□□□□ -0.27
HERC6-202ENST00000273960 MFSD7Q6UXD7 560 aa13.39□□□□□ -0.27
HERC6-202ENST00000273960 C12orf50Q8NA57 414 aaPredicted RBP13.39□□□□□ -0.27
HERC6-202ENST00000273960 RIN3Q8TB24 985 aa13.39□□□□□ -0.27
HERC6-202ENST00000273960 PLEKHO2Q8TD55 490 aa13.39□□□□□ -0.27
HERC6-202ENST00000273960 FAM81BQ96LP2 452 aa13.39□□□□□ -0.27
HERC6-202ENST00000273960 TRIM56Q9BRZ2 755 aaKnown RBP13.39□□□□□ -0.27
HERC6-202ENST00000273960 TUBB6Q9BUF5 446 aa13.39□□□□□ -0.27
HERC6-202ENST00000273960 NOCTQ9UK39 431 aaKnown RBP13.39□□□□□ -0.27
HERC6-202ENST00000273960 DTNAQ9Y4J8 743 aa13.39□□□□□ -0.27
HERC6-202ENST00000273960 COPEO14579 308 aa13.39□□□□□ -0.27
HERC6-202ENST00000273960 DNALI1O14645 258 aaPredicted RBP13.39□□□□□ -0.27
HERC6-202ENST00000273960 ZBTB5O15062 677 aa13.39□□□□□ -0.27
HERC6-202ENST00000273960 BUD23O43709 281 aaKnown RBP13.39□□□□□ -0.27
HERC6-202ENST00000273960 HNRNPCL1O60812 293 aaKnown RBP13.39□□□□□ -0.27
HERC6-202ENST00000273960 PSMD6Q15008 389 aa13.39□□□□□ -0.27
HERC6-202ENST00000273960 PPP1R2P3Q6NXS1 205 aa13.39□□□□□ -0.27
HERC6-202ENST00000273960 UTS2BQ765I0 119 aa13.39□□□□□ -0.27
HERC6-202ENST00000273960 NET1Q7Z628 596 aaPredicted RBP13.39□□□□□ -0.27
HERC6-202ENST00000273960 CPNE9Q8IYJ1 553 aa13.39□□□□□ -0.27
HERC6-202ENST00000273960 DEFB107AQ8IZN7 70 aa13.39□□□□□ -0.27
HERC6-202ENST00000273960 STKLD1Q8NE28 680 aa13.39□□□□□ -0.27
HERC6-202ENST00000273960 LMO3Q8TAP4 145 aa13.39□□□□□ -0.27
HERC6-202ENST00000273960 TMIGD2Q96BF3 282 aa13.39□□□□□ -0.27
HERC6-202ENST00000273960 GJA3Q9Y6H8 435 aa13.39□□□□□ -0.27
HERC6-202ENST00000273960 ANKRD36CQ5JPF3 1778 aa13.39□□□□□ -0.27
HERC6-202ENST00000273960 RGS2P41220 211 aa13.38□□□□□ -0.27
HERC6-202ENST00000273960 DCTN2Q13561 401 aaKnown RBP13.38□□□□□ -0.27
HERC6-202ENST00000273960 DLGAP5Q15398 846 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms