RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 CACNB2Q08289 660 aaPredicted RBP20.74■□□□□ 0.91
CSPG5-201ENST00000264723 TAF1BQ53T94 588 aaPredicted RBP20.74■□□□□ 0.91
CSPG5-201ENST00000264723 MROH9Q5TGP6 573 aa20.74■□□□□ 0.91
CSPG5-201ENST00000264723 NLRP9Q7RTR0 991 aa20.74■□□□□ 0.91
CSPG5-201ENST00000264723 NUDCD3Q8IVD9 361 aa20.74■□□□□ 0.91
CSPG5-201ENST00000264723 NLGN2Q8NFZ4 835 aa20.74■□□□□ 0.91
CSPG5-201ENST00000264723 CCT6BQ92526 530 aa20.74■□□□□ 0.91
CSPG5-201ENST00000264723 GRAMD1AQ96CP6 724 aa20.74■□□□□ 0.91
CSPG5-201ENST00000264723 ZBTB10Q96DT7 871 aa20.74■□□□□ 0.91
CSPG5-201ENST00000264723 KLC2Q9H0B6 622 aa20.74■□□□□ 0.91
CSPG5-201ENST00000264723 MYH14Q7Z406 1995 aaKnown RBP20.74■□□□□ 0.91
CSPG5-201ENST00000264723 OPHN1O60890 802 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 ADRA1DP25100 572 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 DNERQ8NFT8 737 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 PPP4R1Q8TF05 950 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 MAGEB18Q96M61 343 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 AGAP3Q96P47 875 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 CGRRF1Q99675 332 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 NOCTQ9UK39 431 aaKnown RBP20.73■□□□□ 0.91
CSPG5-201ENST00000264723 POLIQ9UNA4 740 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 A0A1W2PPM1 405 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 FSCN2O14926 492 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 ADCY3O60266 1144 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 MOCS2O96007 188 aaPredicted RBP20.73■□□□□ 0.91
CSPG5-201ENST00000264723 HSD17B4P51659 736 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 HIRAP54198 1017 aaPredicted RBP20.73■□□□□ 0.91
CSPG5-201ENST00000264723 TFDP3Q5H9I0 405 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 GNASQ5JWF2 1037 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 MPZL3Q6UWV2 235 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 CEP120Q8N960 986 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 EXD1Q8NHP7 514 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 OSMRQ99650 979 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 VPS11Q9H270 941 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 LRRC19Q9H756 370 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 SYNPO2Q9UMS6 1093 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 PIGHQ14442 188 aaPredicted RBP20.73■□□□□ 0.91
CSPG5-201ENST00000264723 RASIP1Q5U651 963 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 KLRG1Q96E93 195 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 VCXQ9H320 206 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 PCMTD2Q9NV79 361 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 SMG5Q9UPR3 1016 aaKnown RBP20.73■□□□□ 0.91
CSPG5-201ENST00000264723 KRT16P08779 473 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 PEX5P50542 639 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 GCNT1Q02742 428 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 AP1B1Q10567 949 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 BMPR2Q13873 1038 aa20.73■□□□□ 0.91
CSPG5-201ENST00000264723 PSTPIP1O43586 416 aa20.72■□□□□ 0.91
CSPG5-201ENST00000264723 ZNF862O60290 1169 aa20.72■□□□□ 0.91
CSPG5-201ENST00000264723 EPHB2P29323 1055 aa20.72■□□□□ 0.91
CSPG5-201ENST00000264723 ARMC2Q8NEN0 867 aa20.72■□□□□ 0.91
CSPG5-201ENST00000264723 PAFAH2Q99487 392 aa20.72■□□□□ 0.91
CSPG5-201ENST00000264723 MYLK2Q9H1R3 596 aa20.72■□□□□ 0.91
CSPG5-201ENST00000264723 DDX56Q9NY93 547 aaKnown RBP20.72■□□□□ 0.91
CSPG5-201ENST00000264723 ZC3H7BQ9UGR2 993 aaKnown RBP20.72■□□□□ 0.91
CSPG5-201ENST00000264723 UPP2O95045 317 aa20.72■□□□□ 0.91
CSPG5-201ENST00000264723 PAN2Q504Q3 1202 aaKnown RBP20.72■□□□□ 0.91
CSPG5-201ENST00000264723 TLCD1Q96CP7 247 aa20.72■□□□□ 0.91
CSPG5-201ENST00000264723 GEMIN4P57678 1058 aaKnown RBP20.72■□□□□ 0.91
CSPG5-201ENST00000264723 CAPRIN2Q6IMN6 1127 aaKnown RBP20.72■□□□□ 0.91
CSPG5-201ENST00000264723 ZNF677Q86XU0 584 aa20.72■□□□□ 0.91
CSPG5-201ENST00000264723 SSX2IPQ9Y2D8 614 aa20.72■□□□□ 0.91
CSPG5-201ENST00000264723 TRIM49D1C9J1S8 452 aa20.71■□□□□ 0.91
CSPG5-201ENST00000264723 CETPP11597 493 aa20.71■□□□□ 0.91
CSPG5-201ENST00000264723 CKAP2Q8WWK9 683 aa20.71■□□□□ 0.91
CSPG5-201ENST00000264723 CLEC4DQ8WXI8 215 aa20.71■□□□□ 0.91
CSPG5-201ENST00000264723 CAMKK2Q96RR4 588 aa20.71■□□□□ 0.91
CSPG5-201ENST00000264723 CFLARO15519 480 aa20.71■□□□□ 0.91
CSPG5-201ENST00000264723 GNAT1P11488 350 aa20.71■□□□□ 0.91
CSPG5-201ENST00000264723 ADCYAP1R1P41586 468 aa20.71■□□□□ 0.91
CSPG5-201ENST00000264723 NUMBP49757 651 aa20.71■□□□□ 0.91
CSPG5-201ENST00000264723 PTK6Q13882 451 aa20.71■□□□□ 0.91
CSPG5-201ENST00000264723 ARID3BQ8IVW6 561 aaPredicted RBP20.71■□□□□ 0.91
CSPG5-201ENST00000264723 TCP10LQ8TDR4 215 aa20.71■□□□□ 0.91
CSPG5-201ENST00000264723 RMDN2Q96LZ7 410 aa20.71■□□□□ 0.91
CSPG5-201ENST00000264723 GBP5Q96PP8 586 aa20.71■□□□□ 0.91
CSPG5-201ENST00000264723 MANSC1Q9H8J5 431 aa20.71■□□□□ 0.91
CSPG5-201ENST00000264723 RXFP1Q9HBX9 757 aa20.71■□□□□ 0.91
CSPG5-201ENST00000264723 ARMCX1Q9P291 453 aa20.71■□□□□ 0.91
CSPG5-201ENST00000264723 ZNF541Q9H0D2 1346 aa20.71■□□□□ 0.91
CSPG5-201ENST00000264723 MAPTP10636 758 aaKnown RBP20.71■□□□□ 0.91
CSPG5-201ENST00000264723 CCND1P24385 295 aa20.71■□□□□ 0.91
CSPG5-201ENST00000264723 RFC1P35251 1148 aaPredicted RBP20.71■□□□□ 0.91
CSPG5-201ENST00000264723 ZNF200P98182 395 aaPredicted RBP20.71■□□□□ 0.91
CSPG5-201ENST00000264723 SEPT6Q14141 434 aa20.71■□□□□ 0.91
CSPG5-201ENST00000264723 HSDL1Q3SXM5 330 aa20.71■□□□□ 0.91
CSPG5-201ENST00000264723 HEATR6Q6AI08 1181 aaKnown RBP20.71■□□□□ 0.91
CSPG5-201ENST00000264723 CRLF3Q8IUI8 442 aa20.71■□□□□ 0.91
CSPG5-201ENST00000264723 RNF139Q8WU17 664 aa20.71■□□□□ 0.91
CSPG5-201ENST00000264723 DGKDQ16760 1214 aa20.7■□□□□ 0.9
CSPG5-201ENST00000264723 KDELC2Q7Z4H8 507 aa20.7■□□□□ 0.9
CSPG5-201ENST00000264723 EFTUD2Q15029 972 aaKnown RBP eCLIP20.7■□□□□ 0.9
CSPG5-201ENST00000264723 DOT1LQ8TEK3 1739 aa20.7■□□□□ 0.9
CSPG5-201ENST00000264723 CACNA1SQ13698 1873 aa20.7■□□□□ 0.9
CSPG5-201ENST00000264723 DNALI1O14645 258 aaPredicted RBP20.7■□□□□ 0.9
CSPG5-201ENST00000264723 PGM1P36871 562 aa20.7■□□□□ 0.9
CSPG5-201ENST00000264723 SAMD3Q8N6K7 520 aa20.7■□□□□ 0.9
CSPG5-201ENST00000264723 BORCS6Q96GS4 357 aa20.7■□□□□ 0.9
CSPG5-201ENST00000264723 VPS33BQ9H267 617 aa20.7■□□□□ 0.9
CSPG5-201ENST00000264723 DPP3Q9NY33 737 aa20.7■□□□□ 0.9
CSPG5-201ENST00000264723 CST3P01034 146 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms