RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 SMG5Q9UPR3 1016 aaKnown RBP13.52□□□□□ -0.25
TMEM260-201ENST00000261556 STARD13Q9Y3M8 1113 aa13.52□□□□□ -0.25
TMEM260-201ENST00000261556 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.52□□□□□ -0.25
TMEM260-201ENST00000261556 SALL1Q9NSC2 1324 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 SNTNA6NMZ2 147 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 HNRNPCL2B2RXH8 293 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 H7C0C1 242 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 ANKDD1AQ495B1 522 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 ZNF746Q6NUN9 644 aaPredicted RBP13.51□□□□□ -0.25
TMEM260-201ENST00000261556 TLK2Q86UE8 772 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 SLC35G2Q8TBE7 412 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 GAB3Q8WWW8 586 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 PWWP2AQ96N64 755 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 DEPDC7Q96QD5 511 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 TMEM79Q9BSE2 394 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 UVRAGQ9P2Y5 699 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 FAM32AQ9Y421 112 aaKnown RBP13.51□□□□□ -0.25
TMEM260-201ENST00000261556 NRXN1Q9ULB1 1477 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 A0A1W2PQJ5 194 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 POTEMA6NI47 508 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 PIAS1O75925 651 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 TRIM16O95361 564 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 NUDT17P0C025 328 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 GAP43P17677 238 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 PTGS2P35354 604 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 PSMC2P35998 433 aaKnown RBP13.51□□□□□ -0.25
TMEM260-201ENST00000261556 ADRM1Q16186 407 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 STARD8Q92502 1023 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 ZNF75CPQ92670 426 aaPredicted RBP13.51□□□□□ -0.25
TMEM260-201ENST00000261556 BCL10O95999 233 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 PRKCIP41743 596 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 NSFP46459 744 aaKnown RBP13.51□□□□□ -0.25
TMEM260-201ENST00000261556 NR1H3Q13133 447 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 ALX1Q15699 326 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 PGS1Q32NB8 556 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 EDRF1Q3B7T1 1238 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 EMC10Q5UCC4 262 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 IZUMO3Q5VZ72 239 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 ASRGL1Q7L266 308 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 ULK2Q8IYT8 1036 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 FAM149B1Q96BN6 582 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 PPP1R36Q96LQ0 422 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 SERPINI1Q99574 410 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 VTA1Q9NP79 307 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 INIPQ9NRY2 104 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 TAS2R1Q9NYW7 299 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 GPRC5DQ9NZD1 345 aa13.51□□□□□ -0.25
TMEM260-201ENST00000261556 CNOT7Q9UIV1 285 aaKnown RBP13.51□□□□□ -0.25
TMEM260-201ENST00000261556 USP42Q9H9J4 1324 aaKnown RBP13.51□□□□□ -0.25
TMEM260-201ENST00000261556 DGKIO75912 1065 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 RSPH3Q86UC2 560 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 ABI1Q8IZP0 508 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 DCLK2Q8N568 766 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 ZFP28Q8NHY6 868 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 HNRNPABQ99729 332 aaKnown RBP13.5□□□□□ -0.25
TMEM260-201ENST00000261556 SENP7Q9BQF6 1050 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 COPS7BQ9H9Q2 264 aaPredicted RBP13.5□□□□□ -0.25
TMEM260-201ENST00000261556 LY9Q9HBG7 655 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 STMN3Q9NZ72 180 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 NXF1Q9UBU9 619 aaKnown RBP13.5□□□□□ -0.25
TMEM260-201ENST00000261556 FLT1P17948 1338 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 COPEO14579 308 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 PRLP01236 227 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 AKR1B1P15121 316 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 ADRA1DP25100 572 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 POLR2BP30876 1174 aaKnown RBP13.5□□□□□ -0.25
TMEM260-201ENST00000261556 FOXN2P32314 431 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 ALDH1A3P47895 512 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 NT5C2P49902 561 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 ST13P50502 369 aaKnown RBP13.5□□□□□ -0.25
TMEM260-201ENST00000261556 NFX1Q12986 1120 aaKnown RBP13.5□□□□□ -0.25
TMEM260-201ENST00000261556 ART3Q13508 389 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 PFKFB3Q16875 520 aaPredicted RBP13.5□□□□□ -0.25
TMEM260-201ENST00000261556 CYP4V2Q6ZWL3 525 aaPredicted RBP13.5□□□□□ -0.25
TMEM260-201ENST00000261556 OTOAQ7RTW8 1153 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 LINC00116Q8NCU8 138 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 ZSWIM2Q8NEG5 633 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 KRT35Q92764 455 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 NSUN4Q96CB9 384 aaKnown RBP13.5□□□□□ -0.25
TMEM260-201ENST00000261556 SEPT3Q9UH03 358 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 AP4S1Q9Y587 144 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 CLDN3O15551 220 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 MSL3P1P0C860 447 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 CCND2P30279 289 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 RPA3P35244 121 aaPredicted RBP13.5□□□□□ -0.25
TMEM260-201ENST00000261556 CLK3P49761 638 aaKnown RBP13.5□□□□□ -0.25
TMEM260-201ENST00000261556 TUBA4AP68366 448 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 RRP1BQ14684 758 aaKnown RBP13.5□□□□□ -0.25
TMEM260-201ENST00000261556 GEN1Q17RS7 908 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 C15orf59Q2T9L4 293 aaPredicted RBP13.5□□□□□ -0.25
TMEM260-201ENST00000261556 RC3H1Q5TC82 1133 aaKnown RBP13.5□□□□□ -0.25
TMEM260-201ENST00000261556 CCDC89Q8N998 374 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 SNF8Q96H20 258 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 NLRP4Q96MN2 994 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 DACH2Q96NX9 599 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 FAM111AQ96PZ2 611 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 KRT82Q9NSB4 513 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 PCDHA6Q9UN73 950 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 PCDHA8Q9Y5H6 950 aa13.5□□□□□ -0.25
TMEM260-201ENST00000261556 SYNJ2BP-COX16A0A087WUM0 186 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms