RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 STAT2P52630 851 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 CACNB3P54284 484 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 HNRNPH2P55795 449 aaKnown RBP8.49□□□□□ -1.05
CXCR4-201ENST00000241393 SETQ01105 290 aaPredicted RBP8.49□□□□□ -1.05
CXCR4-201ENST00000241393 APBA1Q02410 837 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 MYBPC2Q14324 1141 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 SNX17Q15036 470 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 EPHA7Q15375 998 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 NR0B2Q15466 257 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 ZSCAN26Q16670 478 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 FKBP1CQ5VVH2 108 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 ALS2CLQ60I27 953 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 C8orf74Q6P047 294 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 NFRKBQ6P4R8 1299 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 ZNF574Q6ZN55 896 aaPredicted RBP8.49□□□□□ -1.05
CXCR4-201ENST00000241393 IRF2BP2Q7Z5L9 587 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 SLCO6A1Q86UG4 719 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 FAM160B2Q86V87 743 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 NEK9Q8TD19 979 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 USP33Q8TEY7 942 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 CHURC1Q8WUH1 139 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 SLC5A5Q92911 643 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 TMEM169Q96HH4 297 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 SPAG5Q96R06 1193 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 WDR11Q9BZH6 1224 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 BHMT2Q9H2M3 363 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 ZHX3Q9H4I2 956 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 TMEFF2Q9UIK5 374 aaPredicted RBP8.49□□□□□ -1.05
CXCR4-201ENST00000241393 ODF2LQ9ULJ1 636 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 NENFQ9UMX5 172 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 MRPL11Q9Y3B7 192 aaKnown RBP8.49□□□□□ -1.05
CXCR4-201ENST00000241393 NUB1Q9Y5A7 615 aa8.49□□□□□ -1.05
CXCR4-201ENST00000241393 FRMPD4Q14CM0 1322 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 MYH10P35580 1976 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 TCRBV16S1A1N1A0A5B0 115 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 GOLGA6BA6NDN3 693 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 A6NNZ2 444 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 GCOM1H8Y6P7 765 aaPredicted RBP8.48□□□□□ -1.05
CXCR4-201ENST00000241393 N4BP1O75113 896 aaKnown RBP8.48□□□□□ -1.05
CXCR4-201ENST00000241393 PALMO75781 387 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 AKAP3O75969 853 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 POLR2MP0CAP2 368 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 MYBP10242 640 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 FERP16591 822 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 CAPN2P17655 700 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 KLRC1P26715 233 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 ZNF131P52739 623 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 HK2P52789 917 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 NAP1L1P55209 391 aaKnown RBP8.48□□□□□ -1.05
CXCR4-201ENST00000241393 NPEPPSP55786 919 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 JAM2P57087 298 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 PSMC6P62333 389 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 KIAA0753Q2KHM9 967 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 SHROOM1Q2M3G4 852 aaPredicted RBP8.48□□□□□ -1.05
CXCR4-201ENST00000241393 TUBB8Q3ZCM7 444 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 USH1GQ495M9 461 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 RINT1Q6NUQ1 792 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 OTOP1Q7RTM1 612 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 CCDC103Q8IW40 242 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 IFT20Q8IY31 132 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 FAM133AQ8N9E0 248 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 AFAP1L1Q8TED9 768 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 TMEM174Q8WUU8 243 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 DDX1Q92499 740 aaKnown RBP8.48□□□□□ -1.05
CXCR4-201ENST00000241393 SLC35C1Q96A29 364 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 BORCS6Q96GS4 357 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 PBKQ96KB5 322 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 INPP4AQ96PE3 977 aaPredicted RBP8.48□□□□□ -1.05
CXCR4-201ENST00000241393 LRRC1Q9BTT6 524 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 G6PC3Q9BUM1 346 aa8.48□□□□□ -1.05
CXCR4-201ENST00000241393 RANBP17Q9H2T7 1088 aaKnown RBP8.48□□□□□ -1.05
CXCR4-201ENST00000241393 TDRD3Q9H7E2 651 aaKnown RBP8.48□□□□□ -1.05
CXCR4-201ENST00000241393 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.48□□□□□ -1.05
CXCR4-201ENST00000241393 A0A1W2PRG0 241 aa8.47□□□□□ -1.05
CXCR4-201ENST00000241393 SHTN1A0MZ66 631 aa8.47□□□□□ -1.05
CXCR4-201ENST00000241393 GOLGA8KD6RF30 607 aa8.47□□□□□ -1.05
CXCR4-201ENST00000241393 DNAJC8O75937 253 aaPredicted RBP8.47□□□□□ -1.05
CXCR4-201ENST00000241393 GCNT3O95395 438 aa8.47□□□□□ -1.05
CXCR4-201ENST00000241393 MYBL2P10244 700 aa8.47□□□□□ -1.05
CXCR4-201ENST00000241393 PSMC2P35998 433 aaKnown RBP8.47□□□□□ -1.05
CXCR4-201ENST00000241393 PRELPP51888 382 aa8.47□□□□□ -1.05
CXCR4-201ENST00000241393 TNNC1P63316 161 aa8.47□□□□□ -1.05
CXCR4-201ENST00000241393 PPP2R5AQ15172 486 aa8.47□□□□□ -1.05
CXCR4-201ENST00000241393 RALGPS1Q5JS13 557 aa8.47□□□□□ -1.05
CXCR4-201ENST00000241393 LRCH2Q5VUJ6 765 aa8.47□□□□□ -1.05
CXCR4-201ENST00000241393 C1orf186Q6ZWK4 172 aa8.47□□□□□ -1.05
CXCR4-201ENST00000241393 MREGQ8N565 214 aa8.47□□□□□ -1.05
CXCR4-201ENST00000241393 LZTR1Q8N653 840 aa8.47□□□□□ -1.05
CXCR4-201ENST00000241393 ANKRD13CQ8N6S4 541 aa8.47□□□□□ -1.05
CXCR4-201ENST00000241393 LMBR1Q8WVP7 490 aa8.47□□□□□ -1.05
CXCR4-201ENST00000241393 FAM151AQ8WW52 585 aa8.47□□□□□ -1.05
CXCR4-201ENST00000241393 TAF4BQ92750 862 aa8.47□□□□□ -1.05
CXCR4-201ENST00000241393 TRMT2BQ96GJ1 504 aaKnown RBP8.47□□□□□ -1.05
CXCR4-201ENST00000241393 SH3GL2Q99962 352 aa8.47□□□□□ -1.05
CXCR4-201ENST00000241393 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.47□□□□□ -1.05
CXCR4-201ENST00000241393 FAM204AQ9H8W3 233 aa8.47□□□□□ -1.05
CXCR4-201ENST00000241393 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.47□□□□□ -1.05
CXCR4-201ENST00000241393 PARVGQ9HBI0 331 aa8.47□□□□□ -1.05
CXCR4-201ENST00000241393 SIX2Q9NPC8 291 aa8.47□□□□□ -1.05
CXCR4-201ENST00000241393 GDF3Q9NR23 364 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms