RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 BDNFP23560 247 aa13.95□□□□□ -0.18
TIMP1-201ENST00000218388 HNRNPH3P31942 346 aaKnown RBP13.95□□□□□ -0.18
TIMP1-201ENST00000218388 GRIK1P39086 918 aa13.95□□□□□ -0.18
TIMP1-201ENST00000218388 ALDH1A3P47895 512 aa13.95□□□□□ -0.18
TIMP1-201ENST00000218388 ADKP55263 362 aaKnown RBP13.95□□□□□ -0.18
TIMP1-201ENST00000218388 BST2Q10589 180 aaKnown RBP13.95□□□□□ -0.18
TIMP1-201ENST00000218388 ARID5BQ14865 1188 aa13.95□□□□□ -0.18
TIMP1-201ENST00000218388 CCDC142Q17RM4 750 aa13.95□□□□□ -0.18
TIMP1-201ENST00000218388 MICALL1Q8N3F8 863 aa13.95□□□□□ -0.18
TIMP1-201ENST00000218388 EFHBQ8N7U6 833 aa13.95□□□□□ -0.18
TIMP1-201ENST00000218388 ANKRD52Q8NB46 1076 aa13.95□□□□□ -0.18
TIMP1-201ENST00000218388 SLC22A17Q8WUG5 538 aa13.95□□□□□ -0.18
TIMP1-201ENST00000218388 TFAP2BQ92481 460 aa13.95□□□□□ -0.18
TIMP1-201ENST00000218388 CEP295NLQ96MC4 621 aa13.95□□□□□ -0.18
TIMP1-201ENST00000218388 LPIN3Q9BQK8 851 aa13.95□□□□□ -0.18
TIMP1-201ENST00000218388 DUSP16Q9BY84 665 aa13.95□□□□□ -0.18
TIMP1-201ENST00000218388 ZNF518BQ9C0D4 1074 aa13.95□□□□□ -0.18
TIMP1-201ENST00000218388 IGFLR1Q9H665 355 aa13.95□□□□□ -0.18
TIMP1-201ENST00000218388 DMAP1Q9NPF5 467 aaPredicted RBP13.95□□□□□ -0.18
TIMP1-201ENST00000218388 ACP6Q9NPH0 428 aa13.95□□□□□ -0.18
TIMP1-201ENST00000218388 PCDHGC3Q9UN70 934 aa13.95□□□□□ -0.18
TIMP1-201ENST00000218388 CHD7Q9P2D1 2997 aa13.95□□□□□ -0.18
TIMP1-201ENST00000218388 CLDN5O00501 218 aa13.94□□□□□ -0.18
TIMP1-201ENST00000218388 MICAL2O94851 1124 aa13.94□□□□□ -0.18
TIMP1-201ENST00000218388 LRG1P02750 347 aa13.94□□□□□ -0.18
TIMP1-201ENST00000218388 C8AP07357 584 aa13.94□□□□□ -0.18
TIMP1-201ENST00000218388 SPATA31D3P0C874 917 aa13.94□□□□□ -0.18
TIMP1-201ENST00000218388 EPCAMP16422 314 aa13.94□□□□□ -0.18
TIMP1-201ENST00000218388 NPR3P17342 541 aa13.94□□□□□ -0.18
TIMP1-201ENST00000218388 CYP2F1P24903 491 aa13.94□□□□□ -0.18
TIMP1-201ENST00000218388 HOXA9P31269 272 aa13.94□□□□□ -0.18
TIMP1-201ENST00000218388 CDR2Q01850 454 aa13.94□□□□□ -0.18
TIMP1-201ENST00000218388 HYAL1Q12794 435 aa13.94□□□□□ -0.18
TIMP1-201ENST00000218388 VEPH1Q14D04 833 aa13.94□□□□□ -0.18
TIMP1-201ENST00000218388 PPM1LQ5SGD2 360 aa13.94□□□□□ -0.18
TIMP1-201ENST00000218388 TAF3Q5VWG9 929 aa13.94□□□□□ -0.18
TIMP1-201ENST00000218388 LLGL2Q6P1M3 1020 aa13.94□□□□□ -0.18
TIMP1-201ENST00000218388 TRIM72Q6ZMU5 477 aa13.94□□□□□ -0.18
TIMP1-201ENST00000218388 SPATA31D4Q6ZUB0 917 aa13.94□□□□□ -0.18
TIMP1-201ENST00000218388 IRF2BP2Q7Z5L9 587 aa13.94□□□□□ -0.18
TIMP1-201ENST00000218388 NOP9Q86U38 636 aaKnown RBP13.94□□□□□ -0.18
TIMP1-201ENST00000218388 SCN4BQ8IWT1 228 aa13.94□□□□□ -0.18
TIMP1-201ENST00000218388 ELMOD1Q8N336 334 aa13.94□□□□□ -0.18
TIMP1-201ENST00000218388 SLC7A14Q8TBB6 771 aa13.94□□□□□ -0.18
TIMP1-201ENST00000218388 MYLIPQ8WY64 445 aa13.94□□□□□ -0.18
TIMP1-201ENST00000218388 NOX5Q96PH1 765 aa13.94□□□□□ -0.18
TIMP1-201ENST00000218388 PNPLA8Q9NP80 782 aa13.94□□□□□ -0.18
TIMP1-201ENST00000218388 SEPT11Q9NVA2 429 aaKnown RBP13.94□□□□□ -0.18
TIMP1-201ENST00000218388 NOCTQ9UK39 431 aaKnown RBP13.94□□□□□ -0.18
TIMP1-201ENST00000218388 SLC27A5Q9Y2P5 690 aa13.94□□□□□ -0.18
TIMP1-201ENST00000218388 YIPF1Q9Y548 306 aa13.94□□□□□ -0.18
TIMP1-201ENST00000218388 INSL5Q9Y5Q6 135 aa13.94□□□□□ -0.18
TIMP1-201ENST00000218388 PRRC2BQ5JSZ5 2229 aaKnown RBP13.93□□□□□ -0.18
TIMP1-201ENST00000218388 XPO1O14980 1071 aaKnown RBP13.93□□□□□ -0.18
TIMP1-201ENST00000218388 XYLBO75191 536 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 ZMYND10O75800 440 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 SEC24AO95486 1093 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 VNN2O95498 520 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 LSM8O95777 96 aaKnown RBP13.93□□□□□ -0.18
TIMP1-201ENST00000218388 CALCAP01258 141 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 HNRNPA1P09651 372 aaKnown RBP eCLIP13.93□□□□□ -0.18
TIMP1-201ENST00000218388 TNFAIP3P21580 790 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 EPHB3P54753 998 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 SNX16P57768 344 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 TAF12Q16514 161 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 PPP1R2P3Q6NXS1 205 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 CLEC20AQ6ZU45 233 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 PAQR9Q6ZVX9 377 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 ITIH5Q86UX2 942 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 TTC30AQ86WT1 665 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 GPIHBP1Q8IV16 184 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 TC2NQ8N9U0 490 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 TMEM35BQ8NCS4 154 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 MSANTD4Q8NCY6 345 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 DDX1Q92499 740 aaKnown RBP13.93□□□□□ -0.18
TIMP1-201ENST00000218388 SPATA17Q96L03 361 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 C8orf48Q96LL4 319 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 PANX2Q96RD6 677 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 AGPAT1Q99943 283 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 ZSWIM1Q9BR11 485 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 RHOBTB2Q9BYZ6 727 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 LHX5Q9H2C1 402 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 DEF6Q9H4E7 631 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 HAUS4Q9H6D7 363 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 SFXN1Q9H9B4 322 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 CSNK1G1Q9HCP0 422 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 MTMR10Q9NXD2 777 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 ZDHHC7Q9NXF8 308 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 EHD2Q9NZN4 543 aa13.93□□□□□ -0.18
TIMP1-201ENST00000218388 TRANK1O15050 2925 aa13.92□□□□□ -0.18
TIMP1-201ENST00000218388 F8VP50 259 aa13.92□□□□□ -0.18
TIMP1-201ENST00000218388 MMEP08473 750 aa13.92□□□□□ -0.18
TIMP1-201ENST00000218388 CDR1P51861 262 aa13.92□□□□□ -0.18
TIMP1-201ENST00000218388 MAP3K7CLP57077 242 aa13.92□□□□□ -0.18
TIMP1-201ENST00000218388 CDK17Q00537 523 aa13.92□□□□□ -0.18
TIMP1-201ENST00000218388 FMO1Q01740 532 aa13.92□□□□□ -0.18
TIMP1-201ENST00000218388 PDE4CQ08493 712 aa13.92□□□□□ -0.18
TIMP1-201ENST00000218388 GOLGA8FQ08AF8 430 aa13.92□□□□□ -0.18
TIMP1-201ENST00000218388 GOLGA8DPQ0D2H9 430 aa13.92□□□□□ -0.18
TIMP1-201ENST00000218388 TWF1Q12792 350 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms