RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 E2f5Q61502 335 aa22.31■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Gpsm1Q6IR34 673 aa22.31■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Fnbp1Q80TY0 616 aa22.31■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Pan2Q8BGF7 1200 aaKnown RBP22.31■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Ipo4Q8VI75 1082 aa22.31■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 MrgpreQ91ZB7 310 aa22.31■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Ndufaf7Q9CWG8 436 aa22.31■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 ParvaQ9EPC1 372 aa22.31■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Trhr2Q9ERT2 382 aa22.31■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Rpl9-ps1S4R1R7 191 aa22.31■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Gm3182K7N6T8 263 aa22.3■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 P04214 136 aa22.3■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Zscan2Q07230 614 aa22.3■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Tars2Q3UQ84 723 aaKnown RBP22.3■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Impg2Q80XH2 1243 aa22.3■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 FtoQ8BGW1 502 aa22.3■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Slc13a3Q91Y63 600 aa22.3■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Cfap221A9Q751 836 aa22.29■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Tspyl1O88852 379 aa22.29■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Ptk2P34152 1090 aa22.29■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Ap1m1P35585 423 aa22.29■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 PfkmP47857 780 aaKnown RBP22.29■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Btg3P50615 252 aa22.29■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Tekt4Q149S1 447 aa22.29■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Oca2Q62052 833 aa22.29■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Znf532Q6NXK2 1036 aa22.29■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Fam102aQ78T81 392 aa22.29■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Olfr212Q7TS33 327 aa22.29■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Pja2Q80U04 707 aa22.29■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Rhot1Q8BG51 631 aa22.29■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Kbtbd3Q8BHI4 607 aa22.29■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Svs3bQ8BZH8 265 aa22.29■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Caskin2Q8VHK1 1201 aa22.29■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Dock1Q8BUR4 1865 aa22.29■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Fam81bA0A140LI28 432 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Mup13L7N222 235 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Myl1P05977 188 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Brcc3P46737 291 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Sesn2P58043 480 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Agbl1Q09M05 972 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 UrgcpQ5NCI0 926 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Prl3a1Q78Y73 227 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 WtipQ7TQJ8 398 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Gpr151Q7TSN6 422 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 March4Q80TE3 409 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Ankrd45Q810N6 248 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Arhgef33Q8BW86 850 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Apol9bQ8C7I4 310 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Fam193aQ8CGI1 1231 aaKnown RBP22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Glis1Q8K1M4 789 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Btbd6Q8K2J9 488 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Apol9aQ8VDU3 310 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Fam114a2Q8VE88 497 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Clp1Q99LI9 425 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Slc25a11Q9CR62 314 aaKnown RBP22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Prpf4Q9DAW6 521 aaKnown RBP22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 St6galnac4Q9R2B6 360 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 1110002E22RikE0CYV9 1786 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Olfr743L7N1Y2 311 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Gsg1l2M0QWL6 290 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Stmn1P54227 149 aaKnown RBP22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Uchl4P58321 233 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Tubb5P99024 444 aaKnown RBP22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Naa15Q80UM3 865 aaKnown RBP22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Neto2Q8BNJ6 525 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Metap1Q8BP48 386 aaKnown RBP22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Abraxas1Q8BPZ8 407 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 C130026I21RikQ8C898 291 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Leng8Q8CBY3 785 aaKnown RBP22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Ccdc73Q8CDM4 1066 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Vmn1r218Q8R261 298 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Vmn1r64Q8R2B8 320 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Tmprss4Q8VCA5 435 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 PawrQ925B0 333 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Rtn3Q9ES97 964 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 CtsfQ9R013 462 aa22.28■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Bcl7cO08664 217 aa22.27■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Cyp2b9P12790 491 aa22.27■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Ighmbp2P40694 993 aa22.27■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Crtc1Q68ED7 630 aa22.27■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Q8BGC1 442 aa22.27■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Abi1Q8CBW3 481 aa22.27■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Kdm1bQ8CIG3 826 aa22.27■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Zcchc14Q8VIG0 956 aa22.27■■□□□ 1.16
Ccdc88a-202ENSMUST00000109477 Veph1A1A535 833 aa22.26■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Aarsd1Q3THG9 412 aa22.26■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 EfsQ64355 560 aa22.26■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 HpseQ6YGZ1 535 aa22.26■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Stk40Q7TNL3 435 aa22.26■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Smarcal1Q8BJL0 910 aa22.26■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 KyQ8C8H8 661 aa22.26■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Fam228aQ8CDW1 299 aa22.26■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Pck1Q9Z2V4 622 aa22.26■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Tmem240B2RWJ3 173 aa22.26■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Gm10720D3Z1I5 223 aa22.26■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Zdhhc17Q80TN5 632 aa22.26■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Hpcal4Q8BGZ1 191 aa22.26■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Bpifb6Q8BU51 449 aa22.26■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Klhl7Q8BUL5 586 aa22.26■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Arl2bpQ9D385 163 aa22.26■■□□□ 1.15
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms