RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A SDH4P37298 181 aa11.91□□□□□ -0.5
TRN1tP(UGG)A MSC3Q05812 728 aa11.91□□□□□ -0.5
TRN1tP(UGG)A YCL001W-BQ96VH2 84 aa11.91□□□□□ -0.5
TRN1tP(UGG)A YHR022CP38763 256 aa11.9□□□□□ -0.5
TRN1tP(UGG)A MGA1P53050 456 aa11.9□□□□□ -0.5
TRN1tP(UGG)A TIR1P10863 254 aa11.89□□□□□ -0.51
TRN1tP(UGG)A YGL010WP25338 174 aa11.89□□□□□ -0.51
TRN1tP(UGG)A PAU15P40585 124 aa11.89□□□□□ -0.51
TRN1tP(UGG)A DAN1P47178 298 aa11.89□□□□□ -0.51
TRN1tP(UGG)A YGL185CP53100 379 aa11.89□□□□□ -0.51
TRN1tP(UGG)A APS2Q00381 147 aa11.89□□□□□ -0.51
TRN1tP(UGG)A MRPS8Q03799 155 aa11.89□□□□□ -0.51
TRN1tP(UGG)A MIG3P39943 394 aa11.88□□□□□ -0.51
TRN1tP(UGG)A GET2P40056 285 aa11.88□□□□□ -0.51
TRN1tP(UGG)A YFR045WP43617 309 aa11.88□□□□□ -0.51
TRN1tP(UGG)A CCW12Q12127 133 aa11.88□□□□□ -0.51
TRN1tP(UGG)A YLR342W-AQ3E810 57 aa11.88□□□□□ -0.51
TRN1tP(UGG)A NHP6AP11632 93 aaKnown RBP11.87□□□□□ -0.51
TRN1tP(UGG)A HHO1P53551 258 aa11.87□□□□□ -0.51
TRN1tP(UGG)A YPR063CQ12160 140 aa11.87□□□□□ -0.51
TRN1tP(UGG)A YOP1Q12402 180 aa11.87□□□□□ -0.51
TRN1tP(UGG)A CPT1P17898 393 aa11.86□□□□□ -0.51
TRN1tP(UGG)A SPI1P40092 148 aa11.86□□□□□ -0.51
TRN1tP(UGG)A MOG1P47123 218 aa11.86□□□□□ -0.51
TRN1tP(UGG)A ZEO1Q08245 113 aa11.86□□□□□ -0.51
TRN1tP(UGG)A YOL085CQ99345 113 aa11.86□□□□□ -0.51
TRN1tP(UGG)A QRI5P32344 111 aa11.85□□□□□ -0.51
TRN1tP(UGG)A NSE4P43124 402 aa11.85□□□□□ -0.51
TRN1tP(UGG)A YLR281CQ05863 155 aa11.85□□□□□ -0.51
TRN1tP(UGG)A SNU23Q12368 194 aaPredicted RBP11.85□□□□□ -0.51
TRN1tP(UGG)A YJR096WP47137 282 aa11.84□□□□□ -0.51
TRN1tP(UGG)A GIM5Q04493 163 aa11.84□□□□□ -0.51
TRN1tP(UGG)A TIM11P81449 96 aaPredicted RBP11.83□□□□□ -0.52
TRN1tP(UGG)A UTP23Q12339 254 aaKnown RBP11.83□□□□□ -0.52
TRN1tP(UGG)A CUP2P15315 225 aa11.82□□□□□ -0.52
TRN1tP(UGG)A YNR034W-AQ3E841 98 aa11.81□□□□□ -0.52
TRN1tP(UGG)A MRPL31P14063 131 aaPredicted RBP11.8□□□□□ -0.52
TRN1tP(UGG)A DAD2P36162 133 aa11.8□□□□□ -0.52
TRN1tP(UGG)A PAU5P43575 122 aa11.8□□□□□ -0.52
TRN1tP(UGG)A MIX23P38162 196 aa11.79□□□□□ -0.52
TRN1tP(UGG)A RPB11P38902 120 aa11.79□□□□□ -0.52
TRN1tP(UGG)A PAM17P36147 197 aa11.78□□□□□ -0.52
TRN1tP(UGG)A YFR035CP43608 114 aa11.78□□□□□ -0.52
TRN1tP(UGG)A YML108WQ03759 105 aa11.78□□□□□ -0.52
TRN1tP(UGG)A HMRA1P0CY11 126 aa11.77□□□□□ -0.53
TRN1tP(UGG)A MLF3P32047 452 aa11.77□□□□□ -0.53
TRN1tP(UGG)A YBR013CP38215 129 aa11.77□□□□□ -0.53
TRN1tP(UGG)A COX12Q01519 83 aa11.77□□□□□ -0.53
TRN1tP(UGG)A UPS3Q04006 179 aa11.77□□□□□ -0.53
TRN1tP(UGG)A COX16P47081 118 aa11.76□□□□□ -0.53
TRN1tP(UGG)A CSM4Q08955 156 aa11.76□□□□□ -0.53
TRN1tP(UGG)A TIM22Q12328 207 aa11.76□□□□□ -0.53
TRN1tP(UGG)A VAR1P02381 398 aa11.75□□□□□ -0.53
TRN1tP(UGG)A RPL12AP0CX53 165 aaKnown RBP11.75□□□□□ -0.53
TRN1tP(UGG)A RPL12BP0CX54 165 aa11.75□□□□□ -0.53
TRN1tP(UGG)A GTT1P40582 234 aa11.75□□□□□ -0.53
TRN1tP(UGG)A YGR017WP53210 297 aa11.75□□□□□ -0.53
TRN1tP(UGG)A RPL2AP0CX45 254 aaKnown RBP11.74□□□□□ -0.53
TRN1tP(UGG)A RPL2BP0CX46 254 aaKnown RBP11.74□□□□□ -0.53
TRN1tP(UGG)A VMA16P23968 213 aa11.74□□□□□ -0.53
TRN1tP(UGG)A TMA17Q12513 150 aa11.74□□□□□ -0.53
TRN1tP(UGG)A RPS11AP0CX47 156 aaKnown RBP11.73□□□□□ -0.53
TRN1tP(UGG)A RPS11BP0CX48 156 aaKnown RBP11.73□□□□□ -0.53
TRN1tP(UGG)A NRG2P38082 220 aa11.73□□□□□ -0.53
TRN1tP(UGG)A IRC22P40006 225 aa11.73□□□□□ -0.53
TRN1tP(UGG)A KEG1P43614 200 aa11.73□□□□□ -0.53
TRN1tP(UGG)A YGR026WP53217 278 aa11.73□□□□□ -0.53
TRN1tP(UGG)A DIA1P54005 336 aa11.72□□□□□ -0.53
TRN1tP(UGG)A YDR215CQ12240 137 aa11.72□□□□□ -0.53
TRN1tP(UGG)A AGA1P32323 725 aa11.71□□□□□ -0.53
TRN1tP(UGG)A Q0255P03881 472 aa11.7□□□□□ -0.54
TRN1tP(UGG)A PAU7P39545 55 aa11.7□□□□□ -0.54
TRN1tP(UGG)A DUO1P53168 247 aaKnown RBP11.7□□□□□ -0.54
TRN1tP(UGG)A THG1P53215 237 aaKnown RBP11.7□□□□□ -0.54
TRN1tP(UGG)A PAU19P0CE85 124 aa11.69□□□□□ -0.54
TRN1tP(UGG)A PAU21P0CE86 164 aa11.69□□□□□ -0.54
TRN1tP(UGG)A PAU22P0CE87 164 aa11.69□□□□□ -0.54
TRN1tP(UGG)A PAU3P25610 124 aa11.69□□□□□ -0.54
TRN1tP(UGG)A AUA1P32450 94 aa11.68□□□□□ -0.54
TRN1tP(UGG)A GTO3Q04806 366 aa11.68□□□□□ -0.54
TRN1tP(UGG)A YRA2P36036 203 aaKnown RBP RIP-Chip data11.67□□□□□ -0.54not detected
TRN1tP(UGG)A SDS23P53172 527 aa11.67□□□□□ -0.54
TRN1tP(UGG)A YBR200W-AQ3E755 54 aa11.66□□□□□ -0.54
TRN1tP(UGG)A CYC7P00045 113 aa11.65□□□□□ -0.54
TRN1tP(UGG)A TY1A-HP0C2I4 478 aaKnown RBP11.65□□□□□ -0.54
TRN1tP(UGG)A RPL16BP26785 198 aaKnown RBP11.65□□□□□ -0.54
TRN1tP(UGG)A GPI19Q04082 140 aa11.65□□□□□ -0.54
TRN1tP(UGG)A ARC18Q05933 178 aaKnown RBP11.65□□□□□ -0.54
TRN1tP(UGG)A ZRT1P32804 376 aa11.64□□□□□ -0.55
TRN1tP(UGG)A YHR140WP38842 239 aa11.64□□□□□ -0.55
TRN1tP(UGG)A YDR366CP87287 132 aa11.64□□□□□ -0.55
TRN1tP(UGG)A ATG33Q06485 197 aa11.64□□□□□ -0.55
TRN1tP(UGG)A RPL27AP0C2H6 136 aaKnown RBP11.63□□□□□ -0.55
TRN1tP(UGG)A VHS2P40463 436 aa11.63□□□□□ -0.55
TRN1tP(UGG)A SCW10Q04951 389 aa11.63□□□□□ -0.55
TRN1tP(UGG)A POM33Q12164 279 aa11.63□□□□□ -0.55
TRN1tP(UGG)A YCR001WP25347 104 aa11.62□□□□□ -0.55
TRN1tP(UGG)A RDS3Q06835 107 aaPredicted RBP11.62□□□□□ -0.55
TRN1tP(UGG)A POR1P04840 283 aaKnown RBP11.61□□□□□ -0.55
TRN1tP(UGG)A RPL23AP0CX41 137 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 5,963 RNA–protein pairs in 55.3 ms