RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 EFM5P53200 248 aaKnown RBP-4.55□□□□□ -3.14
snR40snR40 YGR017WP53210 297 aa-4.56□□□□□ -3.14
snR40snR40 FCF2Q12035 217 aaPredicted RBP-4.56□□□□□ -3.14
snR40snR40 YGL041C-BQ3E750 60 aa-4.57□□□□□ -3.14
snR40snR40 RPO26P20435 155 aa-4.58□□□□□ -3.14
snR40snR40 YLR283WQ05867 314 aa-4.58□□□□□ -3.14
snR40snR40 YPL261CQ08976 102 aa-4.58□□□□□ -3.14
snR40snR40 CAT8P39113 1433 aa-4.58□□□□□ -3.14
snR40snR40 SPA2P23201 1466 aaKnown RBP-4.58□□□□□ -3.14
snR40snR40 SSO1P32867 290 aa-4.59□□□□□ -3.14
snR40snR40 MRS4P23500 304 aa-4.6□□□□□ -3.15
snR40snR40 YAL064WP39711 94 aa-4.6□□□□□ -3.15
snR40snR40 YIL086CP40503 102 aa-4.6□□□□□ -3.15
snR40snR40 KRE28Q04431 385 aa-4.6□□□□□ -3.15
snR40snR40 PET20Q99373 253 aa-4.6□□□□□ -3.15
snR40snR40 ECM12O13529 151 aa-4.61□□□□□ -3.15
snR40snR40 COX5BP00425 151 aa-4.61□□□□□ -3.15
snR40snR40 YPL067CQ02754 198 aa-4.61□□□□□ -3.15
snR40snR40 SRP102P36057 244 aaPredicted RBP-4.62□□□□□ -3.15
snR40snR40 PGA1P53896 198 aa-4.62□□□□□ -3.15
snR40snR40 YLR118CQ12354 227 aa-4.62□□□□□ -3.15
snR40snR40 GTT2Q12390 233 aa-4.62□□□□□ -3.15
snR40snR40 YMR31P19955 123 aa-4.63□□□□□ -3.15
snR40snR40 GSP1P32835 219 aaKnown RBP-4.63□□□□□ -3.15
snR40snR40 TIM13P53299 105 aa-4.63□□□□□ -3.15
snR40snR40 YRF1-1P0CX20 1796 aa-4.63□□□□□ -3.15
snR40snR40 YRF1-5P0CX21 1796 aa-4.63□□□□□ -3.15
snR40snR40 YRF1-8P0CX22 1796 aa-4.63□□□□□ -3.15
snR40snR40 RTC6O14464 93 aa-4.64□□□□□ -3.15
snR40snR40 RPS1AP33442 255 aaKnown RBP-4.64□□□□□ -3.15
snR40snR40 IRC18P47056 224 aa-4.64□□□□□ -3.15
snR40snR40 YGL193CP53097 103 aa-4.64□□□□□ -3.15
snR40snR40 MIC10Q96VH5 97 aa-4.64□□□□□ -3.15
snR40snR40 STT4P37297 1900 aa-4.65□□□□□ -3.15
snR40snR40 VMA6P32366 345 aaKnown RBP-4.65□□□□□ -3.15
snR40snR40 SFT2P38166 215 aa-4.65□□□□□ -3.15
snR40snR40 YJL218WP40892 196 aaKnown RBP-4.65□□□□□ -3.15
snR40snR40 PKR1Q03880 122 aaKnown RBP-4.65□□□□□ -3.15
snR40snR40 YPR014CQ6B0W2 109 aa-4.65□□□□□ -3.15
snR40snR40 YDR102CQ03864 110 aa-4.66□□□□□ -3.16
snR40snR40 RPL28P02406 149 aaKnown RBP-4.67□□□□□ -3.16
snR40snR40 YKL044WP36092 106 aa-4.67□□□□□ -3.16
snR40snR40 YER121WP40076 114 aa-4.67□□□□□ -3.16
snR40snR40 YCL001W-AP87012 153 aa-4.67□□□□□ -3.16
snR40snR40 SEC59P20048 519 aa-4.68□□□□□ -3.16
snR40snR40 CWC23P52868 283 aaPredicted RBP-4.68□□□□□ -3.16
snR40snR40 FYV5P25585 152 aa-4.69□□□□□ -3.16
snR40snR40 YAP3P38749 330 aa-4.69□□□□□ -3.16
snR40snR40 YNL184CP53876 108 aa-4.69□□□□□ -3.16
snR40snR40 YOL024WQ08172 172 aa-4.69□□□□□ -3.16
snR40snR40 YLR046CQ12253 270 aa-4.69□□□□□ -3.16
snR40snR40 RPL22AP05749 121 aaKnown RBP-4.7□□□□□ -3.16
snR40snR40 FIG1P38224 298 aa-4.7□□□□□ -3.16
snR40snR40 NAT5Q08689 176 aa-4.7□□□□□ -3.16
snR40snR40 YOR097CQ12274 175 aaPredicted RBP-4.7□□□□□ -3.16
snR40snR40 NUF2P33895 451 aa-4.71□□□□□ -3.16
snR40snR40 MPC2P38857 129 aa-4.71□□□□□ -3.16
snR40snR40 TTI2P47168 421 aa-4.71□□□□□ -3.16
snR40snR40 YPK9Q12697 1472 aa-4.71□□□□□ -3.16
snR40snR40 UBI4P0CG63 381 aaKnown RBP-4.72□□□□□ -3.17
snR40snR40 ATP19P81451 68 aa-4.72□□□□□ -3.17
snR40snR40 ROX3P25046 220 aa-4.73□□□□□ -3.17
snR40snR40 YGL149WP53116 101 aa-4.73□□□□□ -3.17
snR40snR40 COX19Q3E731 98 aa-4.73□□□□□ -3.17
snR40snR40 TOP2P06786 1428 aaKnown RBP-4.73□□□□□ -3.17
snR40snR40 RGI1P40043 161 aaPredicted RBP-4.74□□□□□ -3.17
snR40snR40 TY1B-BRQ12193 1756 aa-4.75□□□□□ -3.17
snR40snR40 PHB1P40961 287 aa-4.75□□□□□ -3.17
snR40snR40 EMC2P47133 292 aaKnown RBP-4.75□□□□□ -3.17
snR40snR40 SCS22Q6Q595 175 aa-4.75□□□□□ -3.17
snR40snR40 LDB7P38210 180 aa-4.76□□□□□ -3.17
snR40snR40 FMC1P40491 155 aa-4.76□□□□□ -3.17
snR40snR40 BRP1P53194 125 aa-4.76□□□□□ -3.17
snR40snR40 SEC72P39742 193 aaKnown RBP-4.77□□□□□ -3.17
snR40snR40 CBT1P36038 271 aaPredicted RBP-4.78□□□□□ -3.17
snR40snR40 YER085CP40058 173 aa-4.78□□□□□ -3.17
snR40snR40 MDY2Q12285 212 aa-4.78□□□□□ -3.17
snR40snR40 YCL048W-AQ2V2Q2 79 aa-4.78□□□□□ -3.17
snR40snR40 YIL002W-AQ3E7Z5 69 aa-4.78□□□□□ -3.17
snR40snR40 QCR2P07257 368 aa-4.79□□□□□ -3.18
snR40snR40 HAP3P13434 144 aa-4.79□□□□□ -3.18
snR40snR40 TPM1P17536 199 aaKnown RBP-4.79□□□□□ -3.18
snR40snR40 RPS1BP23248 255 aaKnown RBP-4.79□□□□□ -3.18
snR40snR40 SHH4Q06236 168 aa-4.79□□□□□ -3.18
snR40snR40 RRT7Q07829 113 aa-4.79□□□□□ -3.18
snR40snR40 PEX11Q12462 236 aa-4.79□□□□□ -3.18
snR40snR40 TRR1P29509 319 aaKnown RBP-4.81□□□□□ -3.18
snR40snR40 RPL38P49167 78 aaKnown RBP-4.81□□□□□ -3.18
snR40snR40 EGD1Q02642 157 aaKnown RBP-4.81□□□□□ -3.18
snR40snR40 MMS1Q06211 1407 aa-4.81□□□□□ -3.18
snR40snR40 PDX3P38075 228 aaKnown RBP-4.82□□□□□ -3.18
snR40snR40 YRB1P41920 201 aaKnown RBP-4.82□□□□□ -3.18
snR40snR40 SSN2P38931 1420 aa-4.82□□□□□ -3.18
snR40snR40 TY2B-LR1P0C2J3 1770 aa-4.83□□□□□ -3.18
snR40snR40 TY2B-FP0CX63 1770 aa-4.83□□□□□ -3.18
snR40snR40 TY2B-GR2P0CX64 1770 aa-4.83□□□□□ -3.18
snR40snR40 TY2B-CP25384 1770 aa-4.83□□□□□ -3.18
snR40snR40 TY2B-DR2Q03494 1770 aa-4.83□□□□□ -3.18
snR40snR40 TY2B-DR3Q07791 1770 aaKnown RBP-4.83□□□□□ -3.18
snR40snR40 TY2B-OR1Q12113 1770 aa-4.83□□□□□ -3.18
Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms