RNA–Protein interactions for RNA: snR11

snR11, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR11, Length 258 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR11snR11 RAF1Q06891 181 aa1.88□□□□□ -2.11
snR11snR11 DCV1P43595 202 aa1.87□□□□□ -2.11
snR11snR11 YAE1P47118 141 aaPredicted RBP1.87□□□□□ -2.11
snR11snR11 SNT2P53127 1403 aa1.87□□□□□ -2.11
snR11snR11 MYO2P19524 1574 aaKnown RBP1.86□□□□□ -2.11
snR11snR11 YFR035CP43608 114 aa1.86□□□□□ -2.11
snR11snR11 BRP1P53194 125 aa1.86□□□□□ -2.11
snR11snR11 GPI11Q06636 219 aa1.86□□□□□ -2.11
snR11snR11 YOR097CQ12274 175 aaPredicted RBP1.86□□□□□ -2.11
snR11snR11 YNL146C-AQ3E7Z1 64 aa1.86□□□□□ -2.11
snR11snR11 RTC6O14464 93 aa1.85□□□□□ -2.11
snR11snR11 NMT1P14743 455 aa1.85□□□□□ -2.11
snR11snR11 FUN14P18411 198 aa1.85□□□□□ -2.11
snR11snR11 YFL051CP43552 160 aa1.85□□□□□ -2.11
snR11snR11 CWC27Q02770 301 aa1.85□□□□□ -2.11
snR11snR11 GTT2Q12390 233 aa1.85□□□□□ -2.11
snR11snR11 COA3Q3E7B2 85 aa1.85□□□□□ -2.11
snR11snR11 MRPL44P19956 98 aa1.84□□□□□ -2.11
snR11snR11 SEC59P20048 519 aa1.84□□□□□ -2.11
snR11snR11 YCR101CP25607 182 aa1.84□□□□□ -2.11
snR11snR11 YKL044WP36092 106 aa1.84□□□□□ -2.11
snR11snR11 RPL13BP40212 199 aaKnown RBP1.84□□□□□ -2.11
snR11snR11 PAM16P42949 149 aa1.84□□□□□ -2.11
snR11snR11 YGL230CP53074 147 aa1.84□□□□□ -2.11
snR11snR11 RCE1Q03530 315 aa1.84□□□□□ -2.11
snR11snR11 RPL13AQ12690 199 aaPredicted RBP1.84□□□□□ -2.11
snR11snR11 KTI11Q3E840 82 aa1.84□□□□□ -2.11
snR11snR11 RPL40AP0CH08 128 aaKnown RBP1.83□□□□□ -2.12
snR11snR11 RPL40BP0CH09 128 aaKnown RBP1.83□□□□□ -2.12
snR11snR11 ANB1P19211 157 aa1.83□□□□□ -2.12
snR11snR11 SNF11P38956 169 aa1.83□□□□□ -2.12
snR11snR11 RGI1P40043 161 aaPredicted RBP1.83□□□□□ -2.12
snR11snR11 YFL065CP43539 102 aa1.83□□□□□ -2.12
snR11snR11 YGL149WP53116 101 aa1.83□□□□□ -2.12
snR11snR11 ERV14P53173 138 aa1.83□□□□□ -2.12
snR11snR11 NAT5Q08689 176 aa1.83□□□□□ -2.12
snR11snR11 FCF2Q12035 217 aaPredicted RBP1.83□□□□□ -2.12
snR11snR11 SPP41P38904 1435 aa1.83□□□□□ -2.12
snR11snR11 PAU21P0CE86 164 aa1.82□□□□□ -2.12
snR11snR11 PAU22P0CE87 164 aa1.82□□□□□ -2.12
snR11snR11 ECM31P38122 312 aa1.82□□□□□ -2.12
snR11snR11 YPL067CQ02754 198 aa1.82□□□□□ -2.12
snR11snR11 YGL010WP25338 174 aa1.81□□□□□ -2.12
snR11snR11 YCR099CP25657 155 aa1.81□□□□□ -2.12
snR11snR11 EMP24P32803 203 aaKnown RBP1.81□□□□□ -2.12
snR11snR11 RPS12P48589 143 aaKnown RBP1.81□□□□□ -2.12
snR11snR11 MPC1P53157 130 aaKnown RBP1.81□□□□□ -2.12
snR11snR11 GPI19Q04082 140 aa1.81□□□□□ -2.12
snR11snR11 OCA6Q12454 224 aa1.81□□□□□ -2.12
snR11snR11 VAR1P02381 398 aa1.8□□□□□ -2.12
snR11snR11 HAP2P06774 265 aa1.8□□□□□ -2.12
snR11snR11 AQY2P0CD90 149 aa1.8□□□□□ -2.12
snR11snR11 YBR027CP38220 110 aa1.8□□□□□ -2.12
snR11snR11 YBR242WP38331 238 aa1.8□□□□□ -2.12
snR11snR11 HSP10P38910 106 aa1.8□□□□□ -2.12
snR11snR11 PAU12P53343 120 aa1.8□□□□□ -2.12
snR11snR11 FYV7Q12247 151 aa1.8□□□□□ -2.12
snR11snR11 UTP11P34247 250 aaPredicted RBP1.79□□□□□ -2.12
snR11snR11 YHR130CP38834 111 aa1.79□□□□□ -2.12
snR11snR11 MDS3P53094 1487 aa1.79□□□□□ -2.12
snR11snR11 CYR1P08678 2026 aaKnown RBP1.78□□□□□ -2.12
snR11snR11 TSC11P40061 1430 aa1.78□□□□□ -2.12
snR11snR11 BUD4P47136 1447 aa1.78□□□□□ -2.12
snR11snR11 ATG8P38182 117 aaRIP-Chip data1.78□□□□□ -2.12not detected
snR11snR11 AIM18P38884 321 aa1.78□□□□□ -2.12
snR11snR11 VAM10Q08474 114 aa1.78□□□□□ -2.12
snR11snR11 RTR2Q12378 196 aa1.78□□□□□ -2.12
snR11snR11 MHF1Q3E835 90 aa1.78□□□□□ -2.12
snR11snR11 YGL014C-AP0C5N1 53 aa1.77□□□□□ -2.13
snR11snR11 HAP3P13434 144 aa1.77□□□□□ -2.13
snR11snR11 AIM4P38305 123 aaPredicted RBP1.77□□□□□ -2.13
snR11snR11 TDA2P40045 126 aa1.77□□□□□ -2.13
snR11snR11 YIL014C-AQ02598 104 aa1.77□□□□□ -2.13
snR11snR11 FIT1Q04433 528 aa1.77□□□□□ -2.13
snR11snR11 YHR213WP0CI67 198 aa1.76□□□□□ -2.13
snR11snR11 YHR212W-AP0CX91 67 aa1.76□□□□□ -2.13
snR11snR11 MRPL11P36521 249 aaPredicted RBP1.76□□□□□ -2.13
snR11snR11 LST8P41318 303 aa1.76□□□□□ -2.13
snR11snR11 SED1Q01589 338 aa1.76□□□□□ -2.13
snR11snR11 YMR103CQ04436 120 aa1.76□□□□□ -2.13
snR11snR11 YLR296WQ05898 108 aa1.76□□□□□ -2.13
snR11snR11 YPR203WQ08994 102 aa1.76□□□□□ -2.13
snR11snR11 MED11Q99278 115 aa1.76□□□□□ -2.13
snR11snR11 TOP2P06786 1428 aaKnown RBP1.75□□□□□ -2.13
snR11snR11 PAU2P32612 120 aa1.75□□□□□ -2.13
snR11snR11 YEA6P39953 335 aa1.75□□□□□ -2.13
snR11snR11 SEN15Q04675 128 aa1.75□□□□□ -2.13
snR11snR11 YLR194CQ05777 254 aa1.75□□□□□ -2.13
snR11snR11 PRM3Q08931 133 aa1.75□□□□□ -2.13
snR11snR11 RIF1P29539 1916 aa1.74□□□□□ -2.13
snR11snR11 UBC5P15732 148 aa1.74□□□□□ -2.13
snR11snR11 PRE1P22141 198 aaKnown RBP1.74□□□□□ -2.13
snR11snR11 HYP2P23301 157 aaKnown RBP1.74□□□□□ -2.13
snR11snR11 MRPL15P36523 253 aa1.74□□□□□ -2.13
snR11snR11 YHL037CP38733 133 aa1.74□□□□□ -2.13
snR11snR11 YER187WP40102 141 aa1.74□□□□□ -2.13
snR11snR11 GNA1P43577 159 aaPredicted RBP1.74□□□□□ -2.13
snR11snR11 YGR164WP53291 111 aa1.74□□□□□ -2.13
snR11snR11 YMR122CQ03879 124 aa1.74□□□□□ -2.13
snR11snR11 YOR289WQ12012 251 aaPredicted RBP1.74□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 66.4 ms