RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W SED1Q01589 338 aa1.52□□□□□ -2.17
SRL1YOR247W SDH7Q04401 133 aa1.52□□□□□ -2.17
SRL1YOR247W TVP18Q04767 167 aa1.52□□□□□ -2.17
SRL1YOR247W ATG8P38182 117 aaRIP-Chip data1.51□□□□□ -2.17not detected
SRL1YOR247W YAR064WP39563 99 aa1.51□□□□□ -2.17
SRL1YOR247W SFT1P43682 97 aa1.51□□□□□ -2.17
SRL1YOR247W RPL33AP05744 107 aaKnown RBP1.5□□□□□ -2.17
SRL1YOR247W ANB1P19211 157 aa1.5□□□□□ -2.17
SRL1YOR247W MRP49P32388 137 aa1.5□□□□□ -2.17
SRL1YOR247W VMA7P39111 118 aa1.5□□□□□ -2.17
SRL1YOR247W YAL064WP39711 94 aa1.5□□□□□ -2.17
SRL1YOR247W YIL102CP40488 101 aa1.5□□□□□ -2.17
SRL1YOR247W HAP3P13434 144 aa1.49□□□□□ -2.17
SRL1YOR247W FUN14P18411 198 aa1.49□□□□□ -2.17
SRL1YOR247W HSP10P38910 106 aa1.49□□□□□ -2.17
SRL1YOR247W YGL149WP53116 101 aa1.49□□□□□ -2.17
SRL1YOR247W BRP1P53194 125 aa1.49□□□□□ -2.17
SRL1YOR247W YPL067CQ02754 198 aa1.49□□□□□ -2.17
SRL1YOR247W RIF1P29539 1916 aa1.48□□□□□ -2.17
SRL1YOR247W HUA1P40325 198 aa1.48□□□□□ -2.17
SRL1YOR247W IRC21Q04772 201 aa1.48□□□□□ -2.17
SRL1YOR247W CDC39P25655 2108 aaKnown RBP1.48□□□□□ -2.17
SRL1YOR247W YGL014C-AP0C5N1 53 aa1.47□□□□□ -2.17
SRL1YOR247W PAU21P0CE86 164 aa1.47□□□□□ -2.17
SRL1YOR247W PAU22P0CE87 164 aa1.47□□□□□ -2.17
SRL1YOR247W NMT1P14743 455 aa1.47□□□□□ -2.17
SRL1YOR247W MRPL11P36521 249 aaPredicted RBP1.47□□□□□ -2.17
SRL1YOR247W TRS20P38334 175 aa1.47□□□□□ -2.17
SRL1YOR247W AIM11P87275 137 aa1.47□□□□□ -2.17
SRL1YOR247W SAE3P89114 91 aa1.47□□□□□ -2.17
SRL1YOR247W CCW12Q12127 133 aa1.47□□□□□ -2.17
SRL1YOR247W PFY1P07274 126 aa1.46□□□□□ -2.18
SRL1YOR247W YHR213WP0CI67 198 aa1.46□□□□□ -2.18
SRL1YOR247W LST8P41318 303 aa1.46□□□□□ -2.18
SRL1YOR247W YNL122CP53921 115 aaPredicted RBP1.46□□□□□ -2.18
SRL1YOR247W YMR122CQ03879 124 aa1.46□□□□□ -2.18
SRL1YOR247W SEN15Q04675 128 aa1.46□□□□□ -2.18
SRL1YOR247W FRQ1Q06389 190 aa1.46□□□□□ -2.18
SRL1YOR247W YOR072WQ08486 104 aa1.46□□□□□ -2.18
SRL1YOR247W YCR001WP25347 104 aa1.45□□□□□ -2.18
SRL1YOR247W GAT4P40569 121 aa1.45□□□□□ -2.18
SRL1YOR247W LCL2Q08045 131 aa1.45□□□□□ -2.18
SRL1YOR247W KTI11Q3E840 82 aa1.45□□□□□ -2.18
SRL1YOR247W HAP2P06774 265 aa1.44□□□□□ -2.18
SRL1YOR247W YJL009WP47078 108 aa1.44□□□□□ -2.18
SRL1YOR247W ERV14P53173 138 aa1.44□□□□□ -2.18
SRL1YOR247W APS2Q00381 147 aa1.44□□□□□ -2.18
SRL1YOR247W YLR118CQ12354 227 aa1.44□□□□□ -2.18
SRL1YOR247W WIP1Q2V2P8 89 aa1.44□□□□□ -2.18
SRL1YOR247W RPL36BO14455 100 aaKnown RBP1.43□□□□□ -2.18
SRL1YOR247W RPL36AP05745 100 aaPredicted RBP1.43□□□□□ -2.18
SRL1YOR247W SEC59P20048 519 aa1.43□□□□□ -2.18
SRL1YOR247W UTP11P34247 250 aaPredicted RBP1.43□□□□□ -2.18
SRL1YOR247W YLR296WQ05898 108 aa1.43□□□□□ -2.18
SRL1YOR247W YLR099W-AQ3E798 87 aa1.43□□□□□ -2.18
SRL1YOR247W HSL1P34244 1518 aa1.42□□□□□ -2.18
SRL1YOR247W RPL37AP49166 88 aaKnown RBP1.42□□□□□ -2.18
SRL1YOR247W AIM36Q03798 255 aa1.42□□□□□ -2.18
SRL1YOR247W MYO2P19524 1574 aaKnown RBP1.42□□□□□ -2.18
SRL1YOR247W RPS22AP0C0W1 130 aaKnown RBP1.41□□□□□ -2.18
SRL1YOR247W RPL40AP0CH08 128 aaKnown RBP1.41□□□□□ -2.18
SRL1YOR247W RPL40BP0CH09 128 aaKnown RBP1.41□□□□□ -2.18
SRL1YOR247W UGX2P32772 223 aa1.41□□□□□ -2.18
SRL1YOR247W RPB11P38902 120 aa1.41□□□□□ -2.18
SRL1YOR247W COA4Q05809 96 aa1.41□□□□□ -2.18
SRL1YOR247W LDB18Q07887 179 aa1.41□□□□□ -2.18
SRL1YOR247W GTT2Q12390 233 aa1.41□□□□□ -2.18
SRL1YOR247W RPS22BQ3E7Y3 130 aaKnown RBP1.41□□□□□ -2.18
SRL1YOR247W YOL013W-AP0C272 63 aaPredicted RBP1.4□□□□□ -2.19
SRL1YOR247W GSP1P32835 219 aaKnown RBP1.4□□□□□ -2.19
SRL1YOR247W YKL044WP36092 106 aa1.4□□□□□ -2.19
SRL1YOR247W AIM18P38884 321 aa1.4□□□□□ -2.19
SRL1YOR247W PRM3Q08931 133 aa1.4□□□□□ -2.19
SRL1YOR247W MED11Q99278 115 aa1.4□□□□□ -2.19
SRL1YOR247W RTC6O14464 93 aa1.39□□□□□ -2.19
SRL1YOR247W MGR2Q02889 113 aa1.39□□□□□ -2.19
SRL1YOR247W YIR021W-AQ3E739 70 aa1.39□□□□□ -2.19
SRL1YOR247W ROM2P51862 1356 aaKnown RBP1.38□□□□□ -2.19
SRL1YOR247W GPI19Q04082 140 aa1.38□□□□□ -2.19
SRL1YOR247W SPC24Q04477 213 aa1.38□□□□□ -2.19
SRL1YOR247W FCF2Q12035 217 aaPredicted RBP1.38□□□□□ -2.19
SRL1YOR247W COA6Q3E846 104 aa1.38□□□□□ -2.19
SRL1YOR247W HFA1P32874 2273 aa1.37□□□□□ -2.19
SRL1YOR247W RPO41P13433 1351 aaKnown RBP1.37□□□□□ -2.19
SRL1YOR247W SNF11P38956 169 aa1.37□□□□□ -2.19
SRL1YOR247W HPA2Q06592 156 aa1.37□□□□□ -2.19
SRL1YOR247W SNT2P53127 1403 aa1.37□□□□□ -2.19
SRL1YOR247W SLH1P53327 1967 aaKnown RBP1.37□□□□□ -2.19
SRL1YOR247W ECM5Q03214 1411 aa1.36□□□□□ -2.19
SRL1YOR247W YOR376W-AQ3E805 51 aa1.36□□□□□ -2.19
SRL1YOR247W YSF3P0C074 85 aaPredicted RBP1.35□□□□□ -2.19
SRL1YOR247W YCR099CP25657 155 aa1.35□□□□□ -2.19
SRL1YOR247W YOR097CQ12274 175 aaPredicted RBP1.35□□□□□ -2.19
SRL1YOR247W YHR213W-BQ8TGK1 99 aa1.35□□□□□ -2.19
SRL1YOR247W TRM732Q03496 1420 aa1.34□□□□□ -2.19
SRL1YOR247W YOR304C-AO14468 76 aa1.34□□□□□ -2.19
SRL1YOR247W TDA2P40045 126 aa1.34□□□□□ -2.19
SRL1YOR247W AIM4P38305 123 aaPredicted RBP1.33□□□□□ -2.2
SRL1YOR247W HHY1P39982 102 aa1.33□□□□□ -2.2
SRL1YOR247W ARL3Q02804 198 aa1.33□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 62.1 ms