RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ABP140	YOR239W	SDC1	Q03323	175 aa		3.13	□□□□□ -1.91
ABP140	YOR239W	YHM2	Q04013	314 aa		3.13	□□□□□ -1.91
ABP140	YOR239W	XYL2	Q07993	356 aa		3.13	□□□□□ -1.91
ABP140	YOR239W	HNT3	Q08702	217 aa		3.13	□□□□□ -1.91
ABP140	YOR239W	CSR2	Q12734	1121 aa		3.13	□□□□□ -1.91
ABP140	YOR239W	RPS21B	Q3E754	87 aa	Known RBP	3.13	□□□□□ -1.91
ABP140	YOR239W	RPL11B	Q3E757	174 aa	Predicted RBP	3.13	□□□□□ -1.91
ABP140	YOR239W	YCL021W-A	Q96VH3	125 aa		3.13	□□□□□ -1.91
ABP140	YOR239W	HTL1	Q9URQ5	78 aa		3.13	□□□□□ -1.91
ABP140	YOR239W	CDC39	P25655	2108 aa	Known RBP	3.13	□□□□□ -1.91
ABP140	YOR239W	YPR117W	Q06116	2489 aa		3.13	□□□□□ -1.91
ABP140	YOR239W	RPS16A	P0CX51	143 aa	Known RBP	3.13	□□□□□ -1.91
ABP140	YOR239W	RPS16B	P0CX52	143 aa	Known RBP	3.13	□□□□□ -1.91
ABP140	YOR239W	NRG2	P38082	220 aa		3.13	□□□□□ -1.91
ABP140	YOR239W	GLE2	P40066	365 aa		3.13	□□□□□ -1.91
ABP140	YOR239W	SDS23	P53172	527 aa		3.13	□□□□□ -1.91
ABP140	YOR239W	YMR007W	Q03675	126 aa		3.13	□□□□□ -1.91
ABP140	YOR239W	RAF1	Q06891	181 aa		3.13	□□□□□ -1.91
ABP140	YOR239W	MSA1	Q08471	629 aa		3.13	□□□□□ -1.91
ABP140	YOR239W	DAD1	Q12248	94 aa		3.13	□□□□□ -1.91
ABP140	YOR239W	BOL1	Q3E793	110 aa		3.13	□□□□□ -1.91
ABP140	YOR239W	TRP1	P00912	224 aa		3.12	□□□□□ -1.91
ABP140	YOR239W	RPS21A	P0C0V8	87 aa	Known RBP	3.12	□□□□□ -1.91
ABP140	YOR239W	RPL23A	P0CX41	137 aa	Known RBP	3.12	□□□□□ -1.91
ABP140	YOR239W	RPL23B	P0CX42	137 aa	Known RBP	3.12	□□□□□ -1.91
ABP140	YOR239W	MDM10	P18409	493 aa		3.12	□□□□□ -1.91
ABP140	YOR239W	YCR050C	P25630	102 aa		3.12	□□□□□ -1.91
ABP140	YOR239W	TIM12	P32830	109 aa		3.12	□□□□□ -1.91
ABP140	YOR239W	APS1	P35181	156 aa		3.12	□□□□□ -1.91
ABP140	YOR239W	YHR140W	P38842	239 aa		3.12	□□□□□ -1.91
ABP140	YOR239W	MRPL49	P40858	161 aa	Predicted RBP	3.12	□□□□□ -1.91
ABP140	YOR239W	HNT2	P49775	206 aa		3.12	□□□□□ -1.91
ABP140	YOR239W	YGR164W	P53291	111 aa		3.12	□□□□□ -1.91
ABP140	YOR239W	MRX11	Q03079	207 aa		3.12	□□□□□ -1.91
ABP140	YOR239W	MCH4	Q08268	501 aa		3.12	□□□□□ -1.91
ABP140	YOR239W	YPL038W-A	Q3E7B4	63 aa		3.12	□□□□□ -1.91
ABP140	YOR239W	YMR316C-A	I2HB70	103 aa		3.11	□□□□□ -1.91
ABP140	YOR239W	RPL2A	P0CX45	254 aa	Known RBP	3.11	□□□□□ -1.91
ABP140	YOR239W	RPL2B	P0CX46	254 aa	Known RBP	3.11	□□□□□ -1.91
ABP140	YOR239W	YCR006C	P25350	157 aa		3.11	□□□□□ -1.91
ABP140	YOR239W	FMP46	P36141	133 aa	Known RBP	3.11	□□□□□ -1.91
ABP140	YOR239W	OM14	P38325	134 aa		3.11	□□□□□ -1.91
ABP140	YOR239W	YHL018W	P38744	120 aa	Predicted RBP	3.11	□□□□□ -1.91
ABP140	YOR239W	SVP26	P38869	228 aa		3.11	□□□□□ -1.91
ABP140	YOR239W	GGC1	P38988	300 aa		3.11	□□□□□ -1.91
ABP140	YOR239W	SKI6	P46948	246 aa	Predicted RBP	3.11	□□□□□ -1.91
ABP140	YOR239W	IRC25	Q07951	179 aa		3.11	□□□□□ -1.91
ABP140	YOR239W	YOL029C	Q08187	201 aa		3.11	□□□□□ -1.91
ABP140	YOR239W	YPS3	Q12303	508 aa		3.11	□□□□□ -1.91
ABP140	YOR239W	YLR365W	Q7LIF2	110 aa		3.11	□□□□□ -1.91
ABP140	YOR239W	YHR139C-A	O13536	103 aa		3.11	□□□□□ -1.91
ABP140	YOR239W	PBI2	P0CT04	75 aa	Known RBP	3.11	□□□□□ -1.91
ABP140	YOR239W	YPS1	P32329	569 aa		3.11	□□□□□ -1.91
ABP140	YOR239W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
ABP140	YOR239W	TIM17	P39515	158 aa		3.11	□□□□□ -1.91
ABP140	YOR239W	SFT1	P43682	97 aa		3.11	□□□□□ -1.91
ABP140	YOR239W	YDR042C	Q03205	200 aa		3.11	□□□□□ -1.91
ABP140	YOR239W	GPI19	Q04082	140 aa		3.11	□□□□□ -1.91
ABP140	YOR239W	USV1	Q12132	391 aa		3.11	□□□□□ -1.91
ABP140	YOR239W	YPR064W	Q12492	139 aa		3.11	□□□□□ -1.91
ABP140	YOR239W	YNL277W-A	Q3E7Z0	62 aa		3.11	□□□□□ -1.91
ABP140	YOR239W	KSH1	Q8TGJ3	72 aa		3.11	□□□□□ -1.91
ABP140	YOR239W	Q0255	P03881	472 aa		3.1	□□□□□ -1.91
ABP140	YOR239W	RFA2	P26754	273 aa	Known RBP	3.1	□□□□□ -1.91
ABP140	YOR239W	IMP1	P28627	190 aa		3.1	□□□□□ -1.91
ABP140	YOR239W	DSS4	P32601	143 aa		3.1	□□□□□ -1.91
ABP140	YOR239W	SMP1	P38128	452 aa		3.1	□□□□□ -1.91
ABP140	YOR239W	GPI18	P38211	433 aa		3.1	□□□□□ -1.91
ABP140	YOR239W	CSH1	P38287	376 aa		3.1	□□□□□ -1.91
ABP140	YOR239W	PCL5	P38794	229 aa		3.1	□□□□□ -1.91
ABP140	YOR239W	YPI1	P43587	155 aa		3.1	□□□□□ -1.91
ABP140	YOR239W	CIS3	P47001	227 aa		3.1	□□□□□ -1.91
ABP140	YOR239W	VPS55	P47111	140 aa		3.1	□□□□□ -1.91
ABP140	YOR239W	ATP19	P81451	68 aa		3.1	□□□□□ -1.91
ABP140	YOR239W	LSM6	Q06406	86 aa	Known RBP	3.1	□□□□□ -1.91
ABP140	YOR239W	YLR012C	Q07927	99 aa		3.1	□□□□□ -1.91
ABP140	YOR239W	MIM1	Q08176	113 aa		3.1	□□□□□ -1.91
ABP140	YOR239W	YOR186W	Q08560	144 aa		3.1	□□□□□ -1.91
ABP140	YOR239W	TIM18	Q08749	192 aa		3.1	□□□□□ -1.91
ABP140	YOR239W	SUT2	Q12286	268 aa		3.1	□□□□□ -1.91
ABP140	YOR239W	YBR255C-A	Q3E776	120 aa		3.1	□□□□□ -1.91
ABP140	YOR239W	RPB8	P20436	146 aa		3.09	□□□□□ -1.91
ABP140	YOR239W	TOM40	P23644	387 aa	Known RBP	3.09	□□□□□ -1.91
ABP140	YOR239W	FZF1	P32805	299 aa		3.09	□□□□□ -1.91
ABP140	YOR239W	SFT2	P38166	215 aa		3.09	□□□□□ -1.91
ABP140	YOR239W	FIP1	P45976	327 aa		3.09	□□□□□ -1.91
ABP140	YOR239W	MMS2	P53152	137 aa		3.09	□□□□□ -1.91
ABP140	YOR239W	YGR219W	P53307	113 aa		3.09	□□□□□ -1.91
ABP140	YOR239W	YPR108W-A	Q3E7B3	70 aa		3.09	□□□□□ -1.91
ABP140	YOR239W	HUG1	Q6Q5K6	68 aa		3.09	□□□□□ -1.91
ABP140	YOR239W	PIS1	P06197	220 aa	Known RBP	3.09	□□□□□ -1.92
ABP140	YOR239W	LST8	P41318	303 aa		3.09	□□□□□ -1.92
ABP140	YOR239W	YLR122C	Q12312	125 aa		3.09	□□□□□ -1.92
ABP140	YOR239W	YPR053C	Q6Q5F3	151 aa		3.09	□□□□□ -1.92
ABP140	YOR239W	CYR1	P08678	2026 aa	Known RBP	3.09	□□□□□ -1.92
ABP140	YOR239W	REC104	P33323	182 aa		3.08	□□□□□ -1.92
ABP140	YOR239W	LYS1	P38998	373 aa	RIP-Chip data	3.08	□□□□□ -1.92	not detected
ABP140	YOR239W	YGR050C	P53231	118 aa		3.08	□□□□□ -1.92
ABP140	YOR239W	PET191	Q02772	108 aa		3.08	□□□□□ -1.92
ABP140	YOR239W	ROT1	Q03691	256 aa		3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms