RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C ATG40Q99325 256 aa2.43□□□□□ -2.02
LCB4YOR171C TY3B-IQ7LHG5 1498 aaKnown RBP2.43□□□□□ -2.02
LCB4YOR171C POR1P04840 283 aaKnown RBP2.43□□□□□ -2.02
LCB4YOR171C RRT1P38192 103 aa2.43□□□□□ -2.02
LCB4YOR171C YEL073CP39974 107 aa2.43□□□□□ -2.02
LCB4YOR171C REE1P40893 198 aa2.43□□□□□ -2.02
LCB4YOR171C THO2P53552 1597 aaKnown RBP2.43□□□□□ -2.02
LCB4YOR171C MMS22Q06164 1454 aa2.43□□□□□ -2.02
LCB4YOR171C TY1B-NL2Q99337 1749 aaKnown RBP2.42□□□□□ -2.02
LCB4YOR171C AUS1Q08409 1394 aa2.42□□□□□ -2.02
LCB4YOR171C SDH3P33421 198 aa2.42□□□□□ -2.02
LCB4YOR171C NRG2P38082 220 aa2.42□□□□□ -2.02
LCB4YOR171C TVP23P38962 199 aa2.42□□□□□ -2.02
LCB4YOR171C PEP8P40335 379 aa2.42□□□□□ -2.02
LCB4YOR171C YGL118CP53132 145 aa2.42□□□□□ -2.02
LCB4YOR171C TVP15Q03860 143 aa2.42□□□□□ -2.02
LCB4YOR171C MIX14Q04341 121 aa2.42□□□□□ -2.02
LCB4YOR171C YDR115WQ04598 105 aa2.42□□□□□ -2.02
LCB4YOR171C ELP6Q04868 273 aa2.42□□□□□ -2.02
LCB4YOR171C YLR296WQ05898 108 aa2.42□□□□□ -2.02
LCB4YOR171C TY1B-DR5P0C2I2 1755 aa2.42□□□□□ -2.02
LCB4YOR171C TY1B-DR6P0C2I3 1755 aa2.42□□□□□ -2.02
LCB4YOR171C TY1B-LR2P0C2I5 1755 aa2.42□□□□□ -2.02
LCB4YOR171C TY1B-LR3P0C2I6 1755 aaKnown RBP2.42□□□□□ -2.02
LCB4YOR171C TY1B-PR1P0C2I9 1755 aaKnown RBP2.42□□□□□ -2.02
LCB4YOR171C TY1B-PR3P0C2J1 1755 aaKnown RBP2.42□□□□□ -2.02
LCB4YOR171C TY1B-JR1P47098 1755 aa2.42□□□□□ -2.02
LCB4YOR171C TY1B-ML2Q03434 1755 aaKnown RBP2.42□□□□□ -2.02
LCB4YOR171C TY1B-ER1Q03612 1755 aa2.42□□□□□ -2.02
LCB4YOR171C TY1B-ML1Q04711 1755 aaKnown RBP2.42□□□□□ -2.02
LCB4YOR171C TY1B-GR2Q12269 1755 aa2.42□□□□□ -2.02
LCB4YOR171C TY1B-OLQ12273 1755 aa2.42□□□□□ -2.02
LCB4YOR171C TY1B-PLQ12414 1755 aaKnown RBP2.42□□□□□ -2.02
LCB4YOR171C YOL162WP0CF19 215 aa2.41□□□□□ -2.02
LCB4YOR171C YEL045CP32616 141 aa2.41□□□□□ -2.02
LCB4YOR171C PTH1P38876 190 aaKnown RBP2.41□□□□□ -2.02
LCB4YOR171C SWM2P40342 146 aa2.41□□□□□ -2.02
LCB4YOR171C THG1P53215 237 aaKnown RBP2.41□□□□□ -2.02
LCB4YOR171C RRT15Q3E811 62 aa2.41□□□□□ -2.02
LCB4YOR171C VPS15P22219 1454 aa2.41□□□□□ -2.02
LCB4YOR171C MID2P36027 376 aa2.41□□□□□ -2.02
LCB4YOR171C SVP26P38869 228 aa2.41□□□□□ -2.02
LCB4YOR171C ASP1P38986 381 aaPredicted RBP2.41□□□□□ -2.02
LCB4YOR171C YNL217WP40152 326 aa2.41□□□□□ -2.02
LCB4YOR171C YDR042CQ03205 200 aa2.41□□□□□ -2.02
LCB4YOR171C YMR295CQ03559 197 aa2.41□□□□□ -2.02
LCB4YOR171C API2Q04413 109 aa2.41□□□□□ -2.02
LCB4YOR171C ECM19Q06011 112 aa2.41□□□□□ -2.02
LCB4YOR171C YOL029CQ08187 201 aa2.41□□□□□ -2.02
LCB4YOR171C YOL131WQ08270 108 aa2.41□□□□□ -2.02
LCB4YOR171C POC4Q12245 148 aaPredicted RBP2.41□□□□□ -2.02
LCB4YOR171C MHF1Q3E835 90 aa2.41□□□□□ -2.02
LCB4YOR171C DNA2P38859 1522 aa2.4□□□□□ -2.02
LCB4YOR171C YPK9Q12697 1472 aa2.4□□□□□ -2.02
LCB4YOR171C RPS25BP0C0T4 108 aaKnown RBP2.4□□□□□ -2.03
LCB4YOR171C RPB9P27999 122 aa2.4□□□□□ -2.03
LCB4YOR171C RPA12P32529 125 aaKnown RBP2.4□□□□□ -2.03
LCB4YOR171C QCR10P37299 77 aa2.4□□□□□ -2.03
LCB4YOR171C HYR1P40581 163 aaKnown RBP2.4□□□□□ -2.03
LCB4YOR171C HUR1P45820 110 aa2.4□□□□□ -2.03
LCB4YOR171C MPC3P53311 146 aa2.4□□□□□ -2.03
LCB4YOR171C RSM19P53733 91 aaPredicted RBP2.4□□□□□ -2.03
LCB4YOR171C ATP19P81451 68 aa2.4□□□□□ -2.03
LCB4YOR171C MZM1Q03429 123 aaPredicted RBP2.4□□□□□ -2.03
LCB4YOR171C IRC25Q07951 179 aa2.4□□□□□ -2.03
LCB4YOR171C DFM1Q12743 341 aaKnown RBP2.4□□□□□ -2.03
LCB4YOR171C ENV10Q99382 181 aa2.4□□□□□ -2.03
LCB4YOR171C PAN1P32521 1480 aa2.4□□□□□ -2.03
LCB4YOR171C COX4P04037 155 aa2.39□□□□□ -2.03
LCB4YOR171C FYV5P25585 152 aa2.39□□□□□ -2.03
LCB4YOR171C YKR045CP36138 183 aa2.39□□□□□ -2.03
LCB4YOR171C YHR125WP38831 101 aa2.39□□□□□ -2.03
LCB4YOR171C YIL054WP40524 105 aa2.39□□□□□ -2.03
LCB4YOR171C YHP1Q04116 353 aa2.39□□□□□ -2.03
LCB4YOR171C CUE4Q04201 117 aaPredicted RBP2.39□□□□□ -2.03
LCB4YOR171C NMA1Q06178 401 aaKnown RBP2.39□□□□□ -2.03
LCB4YOR171C YOR381W-AQ3E804 55 aa2.39□□□□□ -2.03
LCB4YOR171C SUS1Q6WNK7 96 aa2.39□□□□□ -2.03
LCB4YOR171C YCF1P39109 1515 aaKnown RBP2.39□□□□□ -2.03
LCB4YOR171C ESP1Q03018 1630 aa2.39□□□□□ -2.03
LCB4YOR171C ROM2P51862 1356 aaKnown RBP2.39□□□□□ -2.03
LCB4YOR171C DUR1,2P32528 1835 aaKnown RBP2.39□□□□□ -2.03
LCB4YOR171C TY1B-GR3Q12316 1755 aa2.39□□□□□ -2.03
LCB4YOR171C TY1B-ORQ92393 1755 aa2.39□□□□□ -2.03
LCB4YOR171C SMD3P43321 101 aaKnown RBP2.39□□□□□ -2.03
LCB4YOR171C SOM1Q05676 74 aa2.39□□□□□ -2.03
LCB4YOR171C YMR175W-AQ3E766 64 aa2.39□□□□□ -2.03
LCB4YOR171C YRF1-2P40105 1681 aa2.39□□□□□ -2.03
LCB4YOR171C POL1P13382 1468 aa2.38□□□□□ -2.03
LCB4YOR171C MDM35O60200 86 aa2.38□□□□□ -2.03
LCB4YOR171C YHR138CP38841 114 aaPredicted RBP2.38□□□□□ -2.03
LCB4YOR171C EMC6Q12431 108 aa2.38□□□□□ -2.03
LCB4YOR171C YLR363W-AQ3E747 85 aa2.38□□□□□ -2.03
LCB4YOR171C STU1P38198 1513 aa2.38□□□□□ -2.03
LCB4YOR171C IQG1Q12280 1495 aa2.37□□□□□ -2.03
LCB4YOR171C KRE1P17260 313 aa2.37□□□□□ -2.03
LCB4YOR171C FZF1P32805 299 aa2.37□□□□□ -2.03
LCB4YOR171C YER187WP40102 141 aa2.37□□□□□ -2.03
LCB4YOR171C VMA21P41806 77 aa2.37□□□□□ -2.03
LCB4YOR171C ECO1P43605 281 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms