RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C SAL1D6W196 494 aa6.04□□□□□ -1.44
RUP1YOR138C YPS1P32329 569 aa6.04□□□□□ -1.44
RUP1YOR138C YKR045CP36138 183 aa6.04□□□□□ -1.44
RUP1YOR138C RRT1P38192 103 aa6.04□□□□□ -1.44
RUP1YOR138C FYV4P38783 130 aaPredicted RBP6.04□□□□□ -1.44
RUP1YOR138C JID1Q12350 301 aa6.04□□□□□ -1.44
RUP1YOR138C YLR363W-AQ3E747 85 aa6.04□□□□□ -1.44
RUP1YOR138C ERS1P17261 260 aa6.03□□□□□ -1.44
RUP1YOR138C PRS4P38063 326 aaPredicted RBP6.03□□□□□ -1.44
RUP1YOR138C CYC3P06182 269 aa6.03□□□□□ -1.44
RUP1YOR138C ADH5P38113 351 aaKnown RBP6.03□□□□□ -1.44
RUP1YOR138C ECM14P38836 430 aa6.03□□□□□ -1.44
RUP1YOR138C MBB1P39534 108 aa6.03□□□□□ -1.44
RUP1YOR138C GPP2P40106 250 aaKnown RBP6.03□□□□□ -1.44
RUP1YOR138C RPL15BP54780 204 aaPredicted RBP6.03□□□□□ -1.44
RUP1YOR138C VPS71Q03433 280 aa6.03□□□□□ -1.44
RUP1YOR138C IZH3Q07959 543 aa6.03□□□□□ -1.44
RUP1YOR138C DDI2P0CH63 225 aa6.02□□□□□ -1.45
RUP1YOR138C DDI3P0CH64 225 aa6.02□□□□□ -1.45
RUP1YOR138C PRY2P36110 329 aa6.02□□□□□ -1.45
RUP1YOR138C AIM29P36154 155 aa6.02□□□□□ -1.45
RUP1YOR138C YIP1P53039 248 aa6.02□□□□□ -1.45
RUP1YOR138C ATG33Q06485 197 aa6.02□□□□□ -1.45
RUP1YOR138C HTL1Q9URQ5 78 aa6.02□□□□□ -1.45
RUP1YOR138C YHR213WP0CI67 198 aa6.01□□□□□ -1.45
RUP1YOR138C SPC29P33419 253 aa6.01□□□□□ -1.45
RUP1YOR138C SNU13P39990 126 aaKnown RBP6.01□□□□□ -1.45
RUP1YOR138C YJL213WP40896 331 aa6.01□□□□□ -1.45
RUP1YOR138C CAB4P53332 305 aa6.01□□□□□ -1.45
RUP1YOR138C YNL234WP53857 426 aa6.01□□□□□ -1.45
RUP1YOR138C IRC23Q08416 157 aa6.01□□□□□ -1.45
RUP1YOR138C MBF1O14467 151 aaKnown RBP6.01□□□□□ -1.45
RUP1YOR138C DAL80P26343 269 aa6.01□□□□□ -1.45
RUP1YOR138C MRP49P32388 137 aa6.01□□□□□ -1.45
RUP1YOR138C BET5Q03630 159 aa6.01□□□□□ -1.45
RUP1YOR138C PET8P38921 284 aa6□□□□□ -1.45
RUP1YOR138C SGN1P40561 250 aaKnown RBP RIP-Chip data6□□□□□ -1.45not detected
RUP1YOR138C FCY1Q12178 158 aa6□□□□□ -1.45
RUP1YOR138C IRA1P18963 3092 aa6□□□□□ -1.45
RUP1YOR138C CUP1-1P0CX80 61 aa5.99□□□□□ -1.45
RUP1YOR138C CUP1-2P0CX81 61 aa5.99□□□□□ -1.45
RUP1YOR138C APS1P35181 156 aa5.99□□□□□ -1.45
RUP1YOR138C PRE3P38624 215 aa5.99□□□□□ -1.45
RUP1YOR138C YHL037CP38733 133 aa5.99□□□□□ -1.45
RUP1YOR138C MST27P53176 234 aa5.99□□□□□ -1.45
RUP1YOR138C YIL014C-AQ02598 104 aa5.99□□□□□ -1.45
RUP1YOR138C YML079WQ03629 201 aa5.99□□□□□ -1.45
RUP1YOR138C MIX17Q03667 156 aa5.99□□□□□ -1.45
RUP1YOR138C YDL218WQ07629 317 aa5.99□□□□□ -1.45
RUP1YOR138C AIR2Q12476 344 aaKnown RBP5.99□□□□□ -1.45
RUP1YOR138C YCL048W-AQ2V2Q2 79 aa5.99□□□□□ -1.45
RUP1YOR138C TEL1P38110 2787 aa5.99□□□□□ -1.45
RUP1YOR138C RPL12AP0CX53 165 aaKnown RBP5.99□□□□□ -1.45
RUP1YOR138C RPL12BP0CX54 165 aa5.99□□□□□ -1.45
RUP1YOR138C YGR045CP53229 120 aa5.99□□□□□ -1.45
RUP1YOR138C YNL046WP53956 172 aa5.99□□□□□ -1.45
RUP1YOR138C MSL5Q12186 476 aaKnown RBP RIP-Chip data5.99□□□□□ -1.45not detected
RUP1YOR138C CPT1P17898 393 aa5.98□□□□□ -1.45
RUP1YOR138C YKR032WP36127 104 aa5.98□□□□□ -1.45
RUP1YOR138C IMP2P46972 177 aa5.98□□□□□ -1.45
RUP1YOR138C RPL27AP0C2H6 136 aaKnown RBP5.98□□□□□ -1.45
RUP1YOR138C HEM13P11353 328 aaKnown RBP5.98□□□□□ -1.45
RUP1YOR138C ANB1P19211 157 aa5.98□□□□□ -1.45
RUP1YOR138C MRPL20P22354 195 aaPredicted RBP5.98□□□□□ -1.45
RUP1YOR138C YJL163CP46996 555 aa5.98□□□□□ -1.45
RUP1YOR138C YGL260WP53056 76 aa5.98□□□□□ -1.45
RUP1YOR138C COX17Q12287 69 aa5.98□□□□□ -1.45
RUP1YOR138C PAI3P01094 68 aa5.97□□□□□ -1.45
RUP1YOR138C MRPL38P35996 138 aaPredicted RBP5.97□□□□□ -1.45
RUP1YOR138C AGE2P40529 298 aa5.97□□□□□ -1.45
RUP1YOR138C NCA3P46955 337 aa5.97□□□□□ -1.45
RUP1YOR138C UBC7Q02159 165 aa5.97□□□□□ -1.45
RUP1YOR138C YCR023CP25351 611 aa5.96□□□□□ -1.45
RUP1YOR138C YNL198CP40166 100 aa5.96□□□□□ -1.45
RUP1YOR138C ATG39Q06159 398 aa5.96□□□□□ -1.45
RUP1YOR138C IES6P32617 166 aa5.96□□□□□ -1.46
RUP1YOR138C GPI19Q04082 140 aa5.96□□□□□ -1.46
RUP1YOR138C ADH6Q04894 360 aaKnown RBP5.96□□□□□ -1.46
RUP1YOR138C UTP23Q12339 254 aaKnown RBP5.96□□□□□ -1.46
RUP1YOR138C RPL27BP0C2H7 136 aaKnown RBP5.95□□□□□ -1.46
RUP1YOR138C GLE2P40066 365 aa5.95□□□□□ -1.46
RUP1YOR138C YJL027CP47063 138 aaPredicted RBP5.95□□□□□ -1.46
RUP1YOR138C YPL257WQ08974 193 aa5.95□□□□□ -1.46
RUP1YOR138C YLR342W-AQ3E810 57 aa5.95□□□□□ -1.46
RUP1YOR138C YHR140WP38842 239 aa5.94□□□□□ -1.46
RUP1YOR138C YDR042CQ03205 200 aa5.94□□□□□ -1.46
RUP1YOR138C YMR103CQ04436 120 aa5.94□□□□□ -1.46
RUP1YOR138C SNA4Q07549 140 aa5.94□□□□□ -1.46
RUP1YOR138C YIL012WP40551 113 aa5.94□□□□□ -1.46
RUP1YOR138C YJR096WP47137 282 aa5.94□□□□□ -1.46
RUP1YOR138C SUT1P53032 299 aaKnown RBP5.94□□□□□ -1.46
RUP1YOR138C ATP23P53722 227 aa5.94□□□□□ -1.46
RUP1YOR138C PBP4Q07362 185 aaKnown RBP5.94□□□□□ -1.46
RUP1YOR138C DGA1Q08650 418 aa5.94□□□□□ -1.46
RUP1YOR138C YKL044WP36092 106 aa5.93□□□□□ -1.46
RUP1YOR138C GPI18P38211 433 aa5.93□□□□□ -1.46
RUP1YOR138C YPL073CP40323 161 aa5.92□□□□□ -1.46
RUP1YOR138C WWM1P43582 211 aaKnown RBP5.92□□□□□ -1.46
RUP1YOR138C TIM22Q12328 207 aa5.92□□□□□ -1.46
RUP1YOR138C DIA1P54005 336 aa5.92□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms