RNA–Protein interactions for RNA: YNR004W

SWM2, Transcript of Protein with a role in snRNA and snoRNA cap trimethylation, yeastyeast

Gene SWM2, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWM2YNR004W MRPL11P36521 249 aaPredicted RBP0.91□□□□□ -2.26
SWM2YNR004W SFT2P38166 215 aa0.91□□□□□ -2.26
SWM2YNR004W HSP10P38910 106 aa0.91□□□□□ -2.26
SWM2YNR004W GIM4P40005 111 aaKnown RBP0.91□□□□□ -2.26
SWM2YNR004W MVB12P42939 101 aa0.91□□□□□ -2.26
SWM2YNR004W YGL149WP53116 101 aa0.91□□□□□ -2.26
SWM2YNR004W YPL067CQ02754 198 aa0.91□□□□□ -2.26
SWM2YNR004W YMR320WQ04897 101 aa0.91□□□□□ -2.26
SWM2YNR004W DDP1Q99321 188 aaKnown RBP0.91□□□□□ -2.26
SWM2YNR004W COX5BP00425 151 aa0.9□□□□□ -2.27
SWM2YNR004W YMR141CP40211 102 aa0.9□□□□□ -2.27
SWM2YNR004W EMC4P53073 190 aa0.9□□□□□ -2.27
SWM2YNR004W SOM1Q05676 74 aa0.9□□□□□ -2.27
SWM2YNR004W YHR213WP0CI67 198 aa0.89□□□□□ -2.27
SWM2YNR004W NMT1P14743 455 aa0.89□□□□□ -2.27
SWM2YNR004W UTP11P34247 250 aaPredicted RBP0.89□□□□□ -2.27
SWM2YNR004W LST8P41318 303 aa0.89□□□□□ -2.27
SWM2YNR004W YMR321CQ04898 105 aa0.89□□□□□ -2.27
SWM2YNR004W COA4Q05809 96 aa0.88□□□□□ -2.27
SWM2YNR004W YLR296WQ05898 108 aa0.88□□□□□ -2.27
SWM2YNR004W RPL36BO14455 100 aaKnown RBP0.87□□□□□ -2.27
SWM2YNR004W RPL36AP05745 100 aaPredicted RBP0.87□□□□□ -2.27
SWM2YNR004W ELC1Q03071 99 aa0.87□□□□□ -2.27
SWM2YNR004W YOR385WQ08909 290 aa0.87□□□□□ -2.27
SWM2YNR004W SPC3Q12133 184 aa0.87□□□□□ -2.27
SWM2YNR004W YOR1P53049 1477 aa0.86□□□□□ -2.27
SWM2YNR004W SDH7Q04401 133 aa0.86□□□□□ -2.27
SWM2YNR004W FCF2Q12035 217 aaPredicted RBP0.86□□□□□ -2.27
SWM2YNR004W DUR1,2P32528 1835 aaKnown RBP0.85□□□□□ -2.27
SWM2YNR004W QCR10P37299 77 aa0.85□□□□□ -2.27
SWM2YNR004W GSP1P32835 219 aaKnown RBP0.84□□□□□ -2.27
SWM2YNR004W MIC27P50945 234 aa0.84□□□□□ -2.27
SWM2YNR004W NKP2Q06162 153 aa0.84□□□□□ -2.27
SWM2YNR004W GTT2Q12390 233 aa0.84□□□□□ -2.27
SWM2YNR004W HUG1Q6Q5K6 68 aa0.84□□□□□ -2.27
SWM2YNR004W HFA1P32874 2273 aa0.84□□□□□ -2.28
SWM2YNR004W PAU21P0CE86 164 aa0.83□□□□□ -2.28
SWM2YNR004W PAU22P0CE87 164 aa0.83□□□□□ -2.28
SWM2YNR004W YCR050CP25630 102 aa0.83□□□□□ -2.28
SWM2YNR004W SUA7P29055 345 aaPredicted RBP0.83□□□□□ -2.28
SWM2YNR004W PRS3P38689 320 aaKnown RBP0.83□□□□□ -2.28
SWM2YNR004W BRP1P53194 125 aa0.83□□□□□ -2.28
SWM2YNR004W CNL1Q06333 122 aa0.83□□□□□ -2.28
SWM2YNR004W YNL277W-AQ3E7Z0 62 aa0.83□□□□□ -2.28
SWM2YNR004W RPL43AP0CX25 92 aaKnown RBP0.82□□□□□ -2.28
SWM2YNR004W RPL43BP0CX26 92 aa0.82□□□□□ -2.28
SWM2YNR004W MRPL31P14063 131 aaPredicted RBP0.82□□□□□ -2.28
SWM2YNR004W YBR013CP38215 129 aa0.82□□□□□ -2.28
SWM2YNR004W HPA2Q06592 156 aa0.82□□□□□ -2.28
SWM2YNR004W FIT3Q08907 204 aa0.82□□□□□ -2.28
SWM2YNR004W Q0144Q9ZZW2 109 aa0.82□□□□□ -2.28
SWM2YNR004W CDC39P25655 2108 aaKnown RBP0.82□□□□□ -2.28
SWM2YNR004W YSF3P0C074 85 aaPredicted RBP0.81□□□□□ -2.28
SWM2YNR004W RPL40AP0CH08 128 aaKnown RBP0.81□□□□□ -2.28
SWM2YNR004W RPL40BP0CH09 128 aaKnown RBP0.81□□□□□ -2.28
SWM2YNR004W RPL14AP36105 138 aaKnown RBP0.81□□□□□ -2.28
SWM2YNR004W RPL14BP38754 138 aaKnown RBP0.81□□□□□ -2.28
SWM2YNR004W HPM1P40481 377 aa0.81□□□□□ -2.28
SWM2YNR004W PHS1P40857 217 aa0.81□□□□□ -2.28
SWM2YNR004W YGR042WP53227 271 aa0.81□□□□□ -2.28
SWM2YNR004W TVP18Q04767 167 aa0.81□□□□□ -2.28
SWM2YNR004W RIF1P29539 1916 aa0.8□□□□□ -2.28
SWM2YNR004W SRX1P36077 127 aa0.8□□□□□ -2.28
SWM2YNR004W POP7P38291 140 aa0.8□□□□□ -2.28
SWM2YNR004W AIM18P38884 321 aa0.8□□□□□ -2.28
SWM2YNR004W YAL064WP39711 94 aa0.8□□□□□ -2.28
SWM2YNR004W POR2P40478 281 aa0.8□□□□□ -2.28
SWM2YNR004W YDR278CQ05612 105 aa0.8□□□□□ -2.28
SWM2YNR004W RPS20P38701 121 aaKnown RBP0.79□□□□□ -2.28
SWM2YNR004W ERV14P53173 138 aa0.79□□□□□ -2.28
SWM2YNR004W ARL3Q02804 198 aa0.79□□□□□ -2.28
SWM2YNR004W YLR307C-AQ3E825 87 aa0.79□□□□□ -2.28
SWM2YNR004W SNT2P53127 1403 aa0.79□□□□□ -2.28
SWM2YNR004W HSL1P34244 1518 aa0.79□□□□□ -2.28
SWM2YNR004W SEC59P20048 519 aa0.78□□□□□ -2.28
SWM2YNR004W EMP24P32803 203 aaKnown RBP0.78□□□□□ -2.28
SWM2YNR004W CYC2P38909 366 aa0.78□□□□□ -2.28
SWM2YNR004W YGL204CP53089 101 aa0.78□□□□□ -2.28
SWM2YNR004W SAE3P89114 91 aa0.78□□□□□ -2.28
SWM2YNR004W YOR034C-AQ3E735 80 aa0.78□□□□□ -2.28
SWM2YNR004W HYM1P32464 399 aa0.77□□□□□ -2.29
SWM2YNR004W SPC2Q04969 178 aa0.77□□□□□ -2.29
SWM2YNR004W FRQ1Q06389 190 aa0.77□□□□□ -2.29
SWM2YNR004W YLR157W-EP0CF00 54 aa0.76□□□□□ -2.29
SWM2YNR004W ENV10Q99382 181 aa0.76□□□□□ -2.29
SWM2YNR004W YIL163CP40448 117 aa0.75□□□□□ -2.29
SWM2YNR004W ICS3P47034 131 aa0.75□□□□□ -2.29
SWM2YNR004W SLO1Q3E784 85 aa0.75□□□□□ -2.29
SWM2YNR004W RPL22AP05749 121 aaKnown RBP0.74□□□□□ -2.29
SWM2YNR004W AIM4P38305 123 aaPredicted RBP0.74□□□□□ -2.29
SWM2YNR004W YJR128WP47162 119 aa0.74□□□□□ -2.29
SWM2YNR004W DYN2Q02647 92 aa0.74□□□□□ -2.29
SWM2YNR004W YGL041C-BQ3E750 60 aa0.74□□□□□ -2.29
SWM2YNR004W RTC6O14464 93 aa0.73□□□□□ -2.29
SWM2YNR004W VMA7P39111 118 aa0.73□□□□□ -2.29
SWM2YNR004W GPI19Q04082 140 aa0.73□□□□□ -2.29
SWM2YNR004W OCA6Q12454 224 aa0.73□□□□□ -2.29
SWM2YNR004W YKL044WP36092 106 aa0.72□□□□□ -2.29
SWM2YNR004W YLR361C-AQ3E795 98 aa0.72□□□□□ -2.29
SWM2YNR004W MRP49P32388 137 aa0.71□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms