RNA–Protein interactions for RNA: YMR022W

UBC7, Transcript of Ubiquitin conjugating enzyme, yeast

Gene UBC7, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC7	YMR022W	HRD1	Q08109	551 aa		0.28	□□□□□ -2.36
UBC7	YMR022W	FIT2	Q08906	153 aa		0.28	□□□□□ -2.36
UBC7	YMR022W	FIT3	Q08907	204 aa		0.28	□□□□□ -2.36
UBC7	YMR022W	DGK1	Q12382	290 aa		0.28	□□□□□ -2.36
UBC7	YMR022W	EFG1	Q3E705	233 aa	Known RBP	0.28	□□□□□ -2.36
UBC7	YMR022W	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.28	□□□□□ -2.36
UBC7	YMR022W	MHF1	Q3E835	90 aa		0.28	□□□□□ -2.36
UBC7	YMR022W	DDR48	P18899	430 aa	Known RBP	0.27	□□□□□ -2.37
UBC7	YMR022W	YCR023C	P25351	611 aa		0.27	□□□□□ -2.37
UBC7	YMR022W	UGX2	P32772	223 aa		0.27	□□□□□ -2.37
UBC7	YMR022W	YEL008W	P40001	126 aa		0.27	□□□□□ -2.37
UBC7	YMR022W	SPC25	P40014	221 aa		0.27	□□□□□ -2.37
UBC7	YMR022W	APQ12	P40532	138 aa		0.27	□□□□□ -2.37
UBC7	YMR022W	VPS55	P47111	140 aa		0.27	□□□□□ -2.37
UBC7	YMR022W	YJR111C	P47148	283 aa	Known RBP	0.27	□□□□□ -2.37
UBC7	YMR022W	THG1	P53215	237 aa	Known RBP	0.27	□□□□□ -2.37
UBC7	YMR022W	NOP19	P53317	196 aa	Predicted RBP	0.27	□□□□□ -2.37
UBC7	YMR022W	MET31	Q03081	177 aa		0.27	□□□□□ -2.37
UBC7	YMR022W	AIM34	Q03673	198 aa		0.27	□□□□□ -2.37
UBC7	YMR022W	YHP1	Q04116	353 aa		0.27	□□□□□ -2.37
UBC7	YMR022W	HOR7	Q05827	59 aa		0.27	□□□□□ -2.37
UBC7	YMR022W	NOC4	Q06512	552 aa	Predicted RBP	0.27	□□□□□ -2.37
UBC7	YMR022W	BRX1	Q08235	291 aa	Known RBP	0.27	□□□□□ -2.37
UBC7	YMR022W	GRE1	Q08969	168 aa		0.27	□□□□□ -2.37
UBC7	YMR022W	YOR015W	Q12169	119 aa		0.27	□□□□□ -2.37
UBC7	YMR022W	QCR7	P00128	127 aa		0.26	□□□□□ -2.37
UBC7	YMR022W	TIR1	P10863	254 aa		0.26	□□□□□ -2.37
UBC7	YMR022W	PHO85	P17157	305 aa		0.26	□□□□□ -2.37
UBC7	YMR022W	IDP1	P21954	428 aa	Known RBP	0.26	□□□□□ -2.37
UBC7	YMR022W	PRE1	P22141	198 aa	Known RBP	0.26	□□□□□ -2.37
UBC7	YMR022W	UBC8	P28263	218 aa		0.26	□□□□□ -2.37
UBC7	YMR022W	VPS51	P36116	164 aa		0.26	□□□□□ -2.37
UBC7	YMR022W	FES1	P38260	290 aa		0.26	□□□□□ -2.37
UBC7	YMR022W	YFL019C	P43576	117 aa		0.26	□□□□□ -2.37
UBC7	YMR022W	TDA4	P47153	279 aa		0.26	□□□□□ -2.37
UBC7	YMR022W	NRK1	P53915	240 aa		0.26	□□□□□ -2.37
UBC7	YMR022W	TIM11	P81449	96 aa	Predicted RBP	0.26	□□□□□ -2.37
UBC7	YMR022W	COX12	Q01519	83 aa		0.26	□□□□□ -2.37
UBC7	YMR022W	YDR391C	Q04170	232 aa		0.26	□□□□□ -2.37
UBC7	YMR022W	RNH202	Q05635	350 aa		0.26	□□□□□ -2.37
UBC7	YMR022W	SHH4	Q06236	168 aa		0.26	□□□□□ -2.37
UBC7	YMR022W	YLR412C-A	Q3E742	68 aa		0.26	□□□□□ -2.37
UBC7	YMR022W	YMR030W-A	Q3E760	96 aa		0.26	□□□□□ -2.37
UBC7	YMR022W	COA3	Q3E7B2	85 aa		0.26	□□□□□ -2.37
UBC7	YMR022W	HYP2	P23301	157 aa	Known RBP	0.25	□□□□□ -2.37
UBC7	YMR022W	HSP30	P25619	332 aa		0.25	□□□□□ -2.37
UBC7	YMR022W	YBL010C	P32788	280 aa		0.25	□□□□□ -2.37
UBC7	YMR022W	MAK5	P38112	773 aa	Predicted RBP	0.25	□□□□□ -2.37
UBC7	YMR022W	SHG1	P38337	142 aa		0.25	□□□□□ -2.37
UBC7	YMR022W	NSA2	P40078	261 aa	Known RBP	0.25	□□□□□ -2.37
UBC7	YMR022W	GPI14	P47088	403 aa	Known RBP	0.25	□□□□□ -2.37
UBC7	YMR022W	YJR015W	P47090	510 aa		0.25	□□□□□ -2.37
UBC7	YMR022W	NCE101	Q02820	53 aa		0.25	□□□□□ -2.37
UBC7	YMR022W	FIT1	Q04433	528 aa		0.25	□□□□□ -2.37
UBC7	YMR022W	UPS1	Q05776	175 aa		0.25	□□□□□ -2.37
UBC7	YMR022W	YET3	Q07451	203 aa		0.25	□□□□□ -2.37
UBC7	YMR022W	VAM10	Q08474	114 aa		0.25	□□□□□ -2.37
UBC7	YMR022W	ATG41	Q12048	136 aa		0.25	□□□□□ -2.37
UBC7	YMR022W	YDL157C	Q12082	118 aa		0.25	□□□□□ -2.37
UBC7	YMR022W	RAD6	P06104	172 aa		0.24	□□□□□ -2.37
UBC7	YMR022W	NMT1	P14743	455 aa		0.24	□□□□□ -2.37
UBC7	YMR022W	RPC19	P28000	142 aa	Known RBP	0.24	□□□□□ -2.37
UBC7	YMR022W	PTC1	P35182	281 aa		0.24	□□□□□ -2.37
UBC7	YMR022W	AIM18	P38884	321 aa		0.24	□□□□□ -2.37
UBC7	YMR022W	YJL218W	P40892	196 aa	Known RBP	0.24	□□□□□ -2.37
UBC7	YMR022W	NSE4	P43124	402 aa		0.24	□□□□□ -2.37
UBC7	YMR022W	FMP32	P43557	207 aa		0.24	□□□□□ -2.37
UBC7	YMR022W	DCV1	P43595	202 aa		0.24	□□□□□ -2.37
UBC7	YMR022W	YGL235W	P53071	178 aa		0.24	□□□□□ -2.37
UBC7	YMR022W	RCF2	P53721	224 aa		0.24	□□□□□ -2.37
UBC7	YMR022W	YKR005C	Q02203	525 aa		0.24	□□□□□ -2.37
UBC7	YMR022W	LCL1	Q02786	101 aa		0.24	□□□□□ -2.37
UBC7	YMR022W	YML079W	Q03629	201 aa		0.24	□□□□□ -2.37
UBC7	YMR022W	DML1	Q03652	475 aa		0.24	□□□□□ -2.37
UBC7	YMR022W	YMR315W	Q04869	349 aa	Known RBP	0.24	□□□□□ -2.37
UBC7	YMR022W	NAT3	Q06504	195 aa		0.24	□□□□□ -2.37
UBC7	YMR022W	DAS2	Q12084	232 aa		0.24	□□□□□ -2.37
UBC7	YMR022W	FCY1	Q12178	158 aa		0.24	□□□□□ -2.37
UBC7	YMR022W	YCL012C	Q8J0M4	134 aa		0.24	□□□□□ -2.37
UBC7	YMR022W	YCR001W	P25347	104 aa		0.23	□□□□□ -2.37
UBC7	YMR022W	ETR1	P38071	380 aa		0.23	□□□□□ -2.37
UBC7	YMR022W	RRT1	P38192	103 aa		0.23	□□□□□ -2.37
UBC7	YMR022W	YBR242W	P38331	238 aa		0.23	□□□□□ -2.37
UBC7	YMR022W	NVJ1	P38881	321 aa		0.23	□□□□□ -2.37
UBC7	YMR022W	RFC2	P40348	353 aa		0.23	□□□□□ -2.37
UBC7	YMR022W	PGA1	P53896	198 aa		0.23	□□□□□ -2.37
UBC7	YMR022W	GIM3	P53900	129 aa		0.23	□□□□□ -2.37
UBC7	YMR022W	SGF11	Q03067	99 aa		0.23	□□□□□ -2.37
UBC7	YMR022W	PLP1	Q04004	230 aa		0.23	□□□□□ -2.37
UBC7	YMR022W	HPT1	Q04178	221 aa	Known RBP	0.23	□□□□□ -2.37
UBC7	YMR022W	GAL83	Q04739	417 aa		0.23	□□□□□ -2.37
UBC7	YMR022W	ELP6	Q04868	273 aa		0.23	□□□□□ -2.37
UBC7	YMR022W	ATP20	Q12233	115 aa		0.23	□□□□□ -2.37
UBC7	YMR022W	YOR214C	Q12282	236 aa		0.23	□□□□□ -2.37
UBC7	YMR022W	PST2	Q12335	198 aa	Known RBP	0.23	□□□□□ -2.37
UBC7	YMR022W	MPD1	Q12404	318 aa	Known RBP	0.23	□□□□□ -2.37
UBC7	YMR022W	YOR343C	Q12484	108 aa		0.23	□□□□□ -2.37
UBC7	YMR022W	TAR1	Q8TGM6	124 aa		0.23	□□□□□ -2.37
UBC7	YMR022W	YMR105W-A	Q8TGS8	64 aa		0.23	□□□□□ -2.37
UBC7	YMR022W	YDR034C-A	P0C289	58 aa		0.22	□□□□□ -2.37

Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms