RNA–Protein interactions for RNA: YLR411W

CTR3, Transcript of High-affinity copper transporter of the plasma membrane, yeast

Gene CTR3, Length 726 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR3	YLR411W	YIL002W-A	Q3E7Z5	69 aa		4.21	□□□□□ -1.74
CTR3	YLR411W	YDR034W-B	Q6Q5X2	51 aa		4.21	□□□□□ -1.74
CTR3	YLR411W	CUP2	P15315	225 aa		4.2	□□□□□ -1.74
CTR3	YLR411W	ANB1	P19211	157 aa		4.2	□□□□□ -1.74
CTR3	YLR411W	DAL82	P21705	255 aa		4.2	□□□□□ -1.74
CTR3	YLR411W	UTH1	P36135	365 aa		4.2	□□□□□ -1.74
CTR3	YLR411W	PAM17	P36147	197 aa		4.2	□□□□□ -1.74
CTR3	YLR411W	AIM29	P36154	155 aa		4.2	□□□□□ -1.74
CTR3	YLR411W	YBL071C	P38185	102 aa		4.2	□□□□□ -1.74
CTR3	YLR411W	POP7	P38291	140 aa		4.2	□□□□□ -1.74
CTR3	YLR411W	BDH1	P39714	382 aa		4.2	□□□□□ -1.74
CTR3	YLR411W	AGE2	P40529	298 aa		4.2	□□□□□ -1.74
CTR3	YLR411W	MSL1	P40567	111 aa	Predicted RBP	4.2	□□□□□ -1.74
CTR3	YLR411W	TDA4	P47153	279 aa		4.2	□□□□□ -1.74
CTR3	YLR411W	PKR1	Q03880	122 aa	Known RBP	4.2	□□□□□ -1.74
CTR3	YLR411W	SDH7	Q04401	133 aa		4.2	□□□□□ -1.74
CTR3	YLR411W	FIT2	Q08906	153 aa		4.2	□□□□□ -1.74
CTR3	YLR411W	UTP23	Q12339	254 aa	Known RBP	4.2	□□□□□ -1.74
CTR3	YLR411W	YMR316C-A	I2HB70	103 aa		4.19	□□□□□ -1.74
CTR3	YLR411W	SEC4	P07560	215 aa	Known RBP	4.19	□□□□□ -1.74
CTR3	YLR411W	NOP1	P15646	327 aa	Known RBP	4.19	□□□□□ -1.74
CTR3	YLR411W	RPF1	P38805	295 aa	Known RBP	4.19	□□□□□ -1.74
CTR3	YLR411W	MTC6	P38849	526 aa		4.19	□□□□□ -1.74
CTR3	YLR411W	WWM1	P43582	211 aa	Known RBP	4.19	□□□□□ -1.74
CTR3	YLR411W	COX16	P47081	118 aa		4.19	□□□□□ -1.74
CTR3	YLR411W	YMR181C	Q03231	154 aa		4.19	□□□□□ -1.74
CTR3	YLR411W	RFM1	Q12192	310 aa		4.19	□□□□□ -1.74
CTR3	YLR411W	YLR363W-A	Q3E747	85 aa		4.19	□□□□□ -1.74
CTR3	YLR411W	CYR1	P08678	2026 aa	Known RBP	4.18	□□□□□ -1.74
CTR3	YLR411W	MBF1	O14467	151 aa	Known RBP	4.18	□□□□□ -1.74
CTR3	YLR411W	MRPL31	P14063	131 aa	Predicted RBP	4.18	□□□□□ -1.74
CTR3	YLR411W	MRPL20	P22354	195 aa	Predicted RBP	4.18	□□□□□ -1.74
CTR3	YLR411W	MIG1	P27705	504 aa		4.18	□□□□□ -1.74
CTR3	YLR411W	ARO2	P28777	376 aa	Known RBP	4.18	□□□□□ -1.74
CTR3	YLR411W	YKL044W	P36092	106 aa		4.18	□□□□□ -1.74
CTR3	YLR411W	YKR070W	P36151	352 aa	Known RBP	4.18	□□□□□ -1.74
CTR3	YLR411W	SFT2	P38166	215 aa		4.18	□□□□□ -1.74
CTR3	YLR411W	YER188W	P40103	239 aa		4.18	□□□□□ -1.74
CTR3	YLR411W	HST4	P53688	370 aa		4.18	□□□□□ -1.74
CTR3	YLR411W	BET5	Q03630	159 aa		4.18	□□□□□ -1.74
CTR3	YLR411W	YOS1	Q3E834	85 aa		4.18	□□□□□ -1.74
CTR3	YLR411W	FAS1	P07149	2051 aa	Known RBP	4.17	□□□□□ -1.74
CTR3	YLR411W	DDI2	P0CH63	225 aa		4.17	□□□□□ -1.74
CTR3	YLR411W	DDI3	P0CH64	225 aa		4.17	□□□□□ -1.74
CTR3	YLR411W	RPS23A	P0CX29	145 aa	Known RBP	4.17	□□□□□ -1.74
CTR3	YLR411W	RPS23B	P0CX30	145 aa		4.17	□□□□□ -1.74
CTR3	YLR411W	RPL23A	P0CX41	137 aa	Known RBP	4.17	□□□□□ -1.74
CTR3	YLR411W	RPL23B	P0CX42	137 aa	Known RBP	4.17	□□□□□ -1.74
CTR3	YLR411W	DOG2	P38773	246 aa		4.17	□□□□□ -1.74
CTR3	YLR411W	NCA3	P46955	337 aa		4.17	□□□□□ -1.74
CTR3	YLR411W	YGR018C	P53211	109 aa		4.17	□□□□□ -1.74
CTR3	YLR411W	VPS71	Q03433	280 aa		4.17	□□□□□ -1.74
CTR3	YLR411W	RAV2	Q03956	351 aa		4.17	□□□□□ -1.74
CTR3	YLR411W	YHP1	Q04116	353 aa		4.17	□□□□□ -1.74
CTR3	YLR411W	DPP1	Q05521	289 aa		4.17	□□□□□ -1.74
CTR3	YLR411W	CSI2	Q08054	341 aa		4.17	□□□□□ -1.74
CTR3	YLR411W	FSF1	Q12029	327 aa	Known RBP	4.17	□□□□□ -1.74
CTR3	YLR411W	ADH2	P00331	348 aa	Known RBP	4.16	□□□□□ -1.74
CTR3	YLR411W	HEM4	P06174	275 aa		4.16	□□□□□ -1.74
CTR3	YLR411W	YFR045W	P43617	309 aa		4.16	□□□□□ -1.74
CTR3	YLR411W	ARC18	Q05933	178 aa	Known RBP	4.16	□□□□□ -1.74
CTR3	YLR411W	ATO3	Q12359	275 aa		4.16	□□□□□ -1.74
CTR3	YLR411W	YKL023C-A	Q2V2P3	75 aa		4.16	□□□□□ -1.74
CTR3	YLR411W	SAL1	D6W196	494 aa		4.15	□□□□□ -1.75
CTR3	YLR411W	PAI3	P01094	68 aa		4.15	□□□□□ -1.75
CTR3	YLR411W	YPS1	P32329	569 aa		4.15	□□□□□ -1.75
CTR3	YLR411W	YBR220C	P38318	560 aa		4.15	□□□□□ -1.75
CTR3	YLR411W	YNL200C	P40165	246 aa	Known RBP	4.15	□□□□□ -1.75
CTR3	YLR411W	YIL012W	P40551	113 aa		4.15	□□□□□ -1.75
CTR3	YLR411W	SDS23	P53172	527 aa		4.15	□□□□□ -1.75
CTR3	YLR411W	POP3	P53833	195 aa	Predicted RBP	4.15	□□□□□ -1.75
CTR3	YLR411W	YNL046W	P53956	172 aa		4.15	□□□□□ -1.75
CTR3	YLR411W	RUB1	Q03919	77 aa		4.15	□□□□□ -1.75
CTR3	YLR411W	MSC3	Q05812	728 aa		4.15	□□□□□ -1.75
CTR3	YLR411W	RPL27B	P0C2H7	136 aa	Known RBP	4.14	□□□□□ -1.75
CTR3	YLR411W	LDB16	P25587	256 aa		4.14	□□□□□ -1.75
CTR3	YLR411W	YEL045C	P32616	141 aa		4.14	□□□□□ -1.75
CTR3	YLR411W	APS1	P35181	156 aa		4.14	□□□□□ -1.75
CTR3	YLR411W	YBR090C	P38253	122 aa		4.14	□□□□□ -1.75
CTR3	YLR411W	YGP1	P38616	354 aa	Known RBP	4.14	□□□□□ -1.75
CTR3	YLR411W	LST8	P41318	303 aa		4.14	□□□□□ -1.75
CTR3	YLR411W	PIR5	P46999	287 aa		4.14	□□□□□ -1.75
CTR3	YLR411W	SUR7	P54003	302 aa		4.14	□□□□□ -1.75
CTR3	YLR411W	YDR042C	Q03205	200 aa		4.14	□□□□□ -1.75
CTR3	YLR411W	DAD1	Q12248	94 aa		4.14	□□□□□ -1.75
CTR3	YLR411W	WIP1	Q2V2P8	89 aa		4.14	□□□□□ -1.75
CTR3	YLR411W	YLR342W-A	Q3E810	57 aa		4.14	□□□□□ -1.75
CTR3	YLR411W	RPL27A	P0C2H6	136 aa	Known RBP	4.13	□□□□□ -1.75
CTR3	YLR411W	DAL80	P26343	269 aa		4.13	□□□□□ -1.75
CTR3	YLR411W	FZF1	P32805	299 aa		4.13	□□□□□ -1.75
CTR3	YLR411W	RRT1	P38192	103 aa		4.13	□□□□□ -1.75
CTR3	YLR411W	YHL044W	P38727	235 aa		4.13	□□□□□ -1.75
CTR3	YLR411W	CAB4	P53332	305 aa		4.13	□□□□□ -1.75
CTR3	YLR411W	TOM7	P53507	60 aa		4.13	□□□□□ -1.75
CTR3	YLR411W	SWT21	P53873	357 aa	Predicted RBP	4.13	□□□□□ -1.75
CTR3	YLR411W	API2	Q04413	109 aa		4.13	□□□□□ -1.75
CTR3	YLR411W	GTO3	Q04806	366 aa		4.13	□□□□□ -1.75
CTR3	YLR411W	YLR296W	Q05898	108 aa		4.13	□□□□□ -1.75
CTR3	YLR411W	YIL102C-A	Q2V2P5	75 aa		4.13	□□□□□ -1.75
CTR3	YLR411W	VPS13	Q07878	3144 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms