RNA–Protein interactions for RNA: YLR340W

RPP0, Transcript of Conserved ribosomal protein P0 of the ribosomal stalk, yeastyeast

Gene RPP0, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPP0YLR340W DPP1Q05521 289 aa3.19□□□□□ -1.9
RPP0YLR340W AIM45Q12480 344 aaKnown RBP3.19□□□□□ -1.9
RPP0YLR340W YIR021W-AQ3E739 70 aa3.19□□□□□ -1.9
RPP0YLR340W SLO1Q3E784 85 aa3.19□□□□□ -1.9
RPP0YLR340W YPL229WQ99395 206 aa3.19□□□□□ -1.9
RPP0YLR340W ADH2P00331 348 aaKnown RBP3.18□□□□□ -1.9
RPP0YLR340W TPI1P00942 248 aaKnown RBP3.18□□□□□ -1.9
RPP0YLR340W DFR1P07807 211 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
RPP0YLR340W RPS25BP0C0T4 108 aaKnown RBP3.18□□□□□ -1.9
RPP0YLR340W YBR121C-AP0C5L4 52 aa3.18□□□□□ -1.9
RPP0YLR340W CDC50P25656 391 aa3.18□□□□□ -1.9
RPP0YLR340W TIR2P33890 251 aa3.18□□□□□ -1.9
RPP0YLR340W SHB17P36136 271 aaKnown RBP3.18□□□□□ -1.9
RPP0YLR340W LSM2P38203 95 aaKnown RBP3.18□□□□□ -1.9
RPP0YLR340W CWC23P52868 283 aaPredicted RBP3.18□□□□□ -1.9
RPP0YLR340W PDR17P53844 350 aa3.18□□□□□ -1.9
RPP0YLR340W YLR179CQ06252 201 aaKnown RBP3.18□□□□□ -1.9
RPP0YLR340W ATX2Q12067 313 aa3.18□□□□□ -1.9
RPP0YLR340W ERV2Q12284 196 aa3.18□□□□□ -1.9
RPP0YLR340W POM34Q12445 299 aa3.18□□□□□ -1.9
RPP0YLR340W RPS25AQ3E792 108 aaPredicted RBP3.18□□□□□ -1.9
RPP0YLR340W RPF1P38805 295 aaKnown RBP3.17□□□□□ -1.9
RPP0YLR340W OXA1P39952 402 aa3.17□□□□□ -1.9
RPP0YLR340W SPC1P46965 94 aa3.17□□□□□ -1.9
RPP0YLR340W RIB4P50861 169 aaPredicted RBP3.17□□□□□ -1.9
RPP0YLR340W YPS5P53057 165 aa3.17□□□□□ -1.9
RPP0YLR340W YIF1P53845 314 aaKnown RBP3.17□□□□□ -1.9
RPP0YLR340W YNL184CP53876 108 aa3.17□□□□□ -1.9
RPP0YLR340W YMR090WQ04304 227 aaKnown RBP3.17□□□□□ -1.9
RPP0YLR340W YPR145C-AQ2V2P0 78 aa3.17□□□□□ -1.9
RPP0YLR340W YKL183C-AQ3E765 70 aa3.17□□□□□ -1.9
RPP0YLR340W COA2Q3E823 68 aa3.17□□□□□ -1.9
RPP0YLR340W YOL085CQ99345 113 aa3.17□□□□□ -1.9
RPP0YLR340W POF1P25576 258 aa3.16□□□□□ -1.9
RPP0YLR340W YFL067WP43537 175 aa3.16□□□□□ -1.9
RPP0YLR340W MIC27P50945 234 aa3.16□□□□□ -1.9
RPP0YLR340W TPN1P53099 579 aa3.16□□□□□ -1.9
RPP0YLR340W ATP23P53722 227 aa3.16□□□□□ -1.9
RPP0YLR340W YNR071CP53757 342 aa3.16□□□□□ -1.9
RPP0YLR340W PBA1Q05778 276 aa3.16□□□□□ -1.9
RPP0YLR340W BER1Q06688 274 aaKnown RBP3.16□□□□□ -1.9
RPP0YLR340W FSF1Q12029 327 aaKnown RBP3.16□□□□□ -1.9
RPP0YLR340W RDI1Q12434 202 aa3.16□□□□□ -1.9
RPP0YLR340W YGR240C-AQ3E786 66 aa3.16□□□□□ -1.9
RPP0YLR340W YLL066W-BQ8TGJ7 56 aa3.16□□□□□ -1.9
RPP0YLR340W SPS2P08459 502 aa3.15□□□□□ -1.91
RPP0YLR340W CPT1P17898 393 aa3.15□□□□□ -1.91
RPP0YLR340W LDS1P31379 325 aa3.15□□□□□ -1.91
RPP0YLR340W EMP24P32803 203 aaKnown RBP3.15□□□□□ -1.91
RPP0YLR340W RPL13BP40212 199 aaKnown RBP3.15□□□□□ -1.91
RPP0YLR340W YCH1P42937 148 aa3.15□□□□□ -1.91
RPP0YLR340W YFR057WP43625 151 aa3.15□□□□□ -1.91
RPP0YLR340W LSM7P53905 115 aaKnown RBP3.15□□□□□ -1.91
RPP0YLR340W AIM34Q03673 198 aa3.15□□□□□ -1.91
RPP0YLR340W SHH3Q04487 196 aa3.15□□□□□ -1.91
RPP0YLR340W RPL13AQ12690 199 aaPredicted RBP3.15□□□□□ -1.91
RPP0YLR340W YPR014CQ6B0W2 109 aa3.15□□□□□ -1.91
RPP0YLR340W YDR157WA0A023PZE8 133 aa3.14□□□□□ -1.91
RPP0YLR340W RPN13O13563 156 aa3.14□□□□□ -1.91
RPP0YLR340W YCR023CP25351 611 aa3.14□□□□□ -1.91
RPP0YLR340W MRPL24P36525 258 aaPredicted RBP3.14□□□□□ -1.91
RPP0YLR340W IPI1P38803 334 aaPredicted RBP3.14□□□□□ -1.91
RPP0YLR340W MBB1P39534 108 aa3.14□□□□□ -1.91
RPP0YLR340W YGR269WP40326 108 aa3.14□□□□□ -1.91
RPP0YLR340W SWM2P40342 146 aa3.14□□□□□ -1.91
RPP0YLR340W SAS2P40963 338 aa3.14□□□□□ -1.91
RPP0YLR340W DSK2P48510 373 aa3.14□□□□□ -1.91
RPP0YLR340W TMA23Q03525 211 aa3.14□□□□□ -1.91
RPP0YLR340W FCF2Q12035 217 aaPredicted RBP3.14□□□□□ -1.91
RPP0YLR340W ATP14Q12349 124 aa3.14□□□□□ -1.91
RPP0YLR340W DFM1Q12743 341 aaKnown RBP3.14□□□□□ -1.91
RPP0YLR340W YLR302CO13544 120 aa3.13□□□□□ -1.91
RPP0YLR340W RTC6O14464 93 aa3.13□□□□□ -1.91
RPP0YLR340W VAR1P02381 398 aa3.13□□□□□ -1.91
RPP0YLR340W RPL31AP0C2H8 113 aaKnown RBP3.13□□□□□ -1.91
RPP0YLR340W RPL31BP0C2H9 113 aaKnown RBP3.13□□□□□ -1.91
RPP0YLR340W CPR1P14832 162 aaKnown RBP3.13□□□□□ -1.91
RPP0YLR340W RPB3P16370 318 aaKnown RBP3.13□□□□□ -1.91
RPP0YLR340W MAG1P22134 296 aaKnown RBP3.13□□□□□ -1.91
RPP0YLR340W COQ3P27680 312 aa3.13□□□□□ -1.91
RPP0YLR340W YPC1P38298 316 aa3.13□□□□□ -1.91
RPP0YLR340W SLM6P38343 150 aa3.13□□□□□ -1.91
RPP0YLR340W ASP1P38986 381 aaPredicted RBP3.13□□□□□ -1.91
RPP0YLR340W NSE4P43124 402 aa3.13□□□□□ -1.91
RPP0YLR340W YJL028WP47062 111 aa3.13□□□□□ -1.91
RPP0YLR340W HHO1P53551 258 aa3.13□□□□□ -1.91
RPP0YLR340W GPI15P53961 229 aa3.13□□□□□ -1.91
RPP0YLR340W APS2Q00381 147 aa3.13□□□□□ -1.91
RPP0YLR340W ABF2Q02486 183 aa3.13□□□□□ -1.91
RPP0YLR340W PKR1Q03880 122 aaKnown RBP3.13□□□□□ -1.91
RPP0YLR340W ARR3Q06598 404 aa3.13□□□□□ -1.91
RPP0YLR340W YGL194C-AQ2V2P6 80 aa3.13□□□□□ -1.91
RPP0YLR340W YBR013CP38215 129 aa3.12□□□□□ -1.91
RPP0YLR340W SPI1P40092 148 aa3.12□□□□□ -1.91
RPP0YLR340W GLC8P41818 229 aa3.12□□□□□ -1.91
RPP0YLR340W GLO1P50107 326 aa3.12□□□□□ -1.91
RPP0YLR340W ERG27Q12452 347 aaKnown RBP3.12□□□□□ -1.91
RPP0YLR340W Q0255P03881 472 aa3.11□□□□□ -1.91
RPP0YLR340W YDR034C-AP0C289 58 aa3.11□□□□□ -1.91
RPP0YLR340W MSK1P32048 576 aa3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms