RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W APS2Q00381 147 aa7.67□□□□□ -1.18
SHH4YLR164W AME1P38313 324 aa7.66□□□□□ -1.18
SHH4YLR164W YDL183CP48569 320 aa7.66□□□□□ -1.18
SHH4YLR164W YNR034W-AQ3E841 98 aa7.66□□□□□ -1.18
SHH4YLR164W MIX23P38162 196 aa7.65□□□□□ -1.18
SHH4YLR164W SPI1P40092 148 aa7.65□□□□□ -1.18
SHH4YLR164W YFR045WP43617 309 aa7.65□□□□□ -1.18
SHH4YLR164W TDA4P47153 279 aa7.65□□□□□ -1.18
SHH4YLR164W YIP3P53633 176 aa7.65□□□□□ -1.18
SHH4YLR164W YOR105WQ08504 108 aa7.65□□□□□ -1.18
SHH4YLR164W GEP3Q08622 556 aa7.65□□□□□ -1.18
SHH4YLR164W PAU19P0CE85 124 aa7.64□□□□□ -1.19
SHH4YLR164W PAU21P0CE86 164 aa7.64□□□□□ -1.19
SHH4YLR164W PAU22P0CE87 164 aa7.64□□□□□ -1.19
SHH4YLR164W MRPL20P22354 195 aaPredicted RBP7.64□□□□□ -1.19
SHH4YLR164W PAU3P25610 124 aa7.64□□□□□ -1.19
SHH4YLR164W IZH3Q07959 543 aa7.64□□□□□ -1.19
SHH4YLR164W YOL085CQ99345 113 aa7.64□□□□□ -1.19
SHH4YLR164W MRPL31P14063 131 aaPredicted RBP7.63□□□□□ -1.19
SHH4YLR164W UTR5P32630 166 aa7.63□□□□□ -1.19
SHH4YLR164W MIC26P50087 233 aa7.63□□□□□ -1.19
SHH4YLR164W YGL185CP53100 379 aa7.63□□□□□ -1.19
SHH4YLR164W DAD1Q12248 94 aa7.63□□□□□ -1.19
SHH4YLR164W YNL146C-AQ3E7Z1 64 aa7.63□□□□□ -1.19
SHH4YLR164W YER135CP40082 130 aa7.62□□□□□ -1.19
SHH4YLR164W GIM5Q04493 163 aa7.62□□□□□ -1.19
SHH4YLR164W ECM33P38248 429 aaKnown RBP7.61□□□□□ -1.19
SHH4YLR164W YHR022CP38763 256 aa7.61□□□□□ -1.19
SHH4YLR164W YMR244WQ04018 355 aa7.61□□□□□ -1.19
SHH4YLR164W TRI1Q05024 226 aa7.61□□□□□ -1.19
SHH4YLR164W RRG8Q06109 277 aa7.61□□□□□ -1.19
SHH4YLR164W YDR215CQ12240 137 aa7.61□□□□□ -1.19
SHH4YLR164W YLR342W-AQ3E810 57 aa7.61□□□□□ -1.19
SHH4YLR164W POR1P04840 283 aaKnown RBP7.6□□□□□ -1.19
SHH4YLR164W CPT1P17898 393 aa7.6□□□□□ -1.19
SHH4YLR164W YBR144CP34215 104 aa7.6□□□□□ -1.19
SHH4YLR164W RPB11P38902 120 aa7.6□□□□□ -1.19
SHH4YLR164W MIG3P39943 394 aa7.6□□□□□ -1.19
SHH4YLR164W ATP16Q12165 160 aa7.6□□□□□ -1.19
SHH4YLR164W YCR024C-BQ3E7Z8 88 aa7.6□□□□□ -1.19
SHH4YLR164W HMRA1P0CY11 126 aa7.59□□□□□ -1.19
SHH4YLR164W MDM10P18409 493 aa7.59□□□□□ -1.19
SHH4YLR164W YFR035CP43608 114 aa7.59□□□□□ -1.19
SHH4YLR164W ARL3Q02804 198 aa7.59□□□□□ -1.19
SHH4YLR164W VPS71Q03433 280 aa7.59□□□□□ -1.19
SHH4YLR164W MIG1P27705 504 aa7.58□□□□□ -1.2
SHH4YLR164W YGR149WP48236 432 aa7.58□□□□□ -1.2
SHH4YLR164W CCW12Q12127 133 aa7.58□□□□□ -1.2
SHH4YLR164W MSN1P22148 382 aa7.57□□□□□ -1.2
SHH4YLR164W MPC2P38857 129 aa7.57□□□□□ -1.2
SHH4YLR164W SDS23P53172 527 aa7.57□□□□□ -1.2
SHH4YLR164W TY1A-HP0C2I4 478 aaKnown RBP7.56□□□□□ -1.2
SHH4YLR164W YGR017WP53210 297 aa7.56□□□□□ -1.2
SHH4YLR164W CYT2Q00873 224 aa7.56□□□□□ -1.2
SHH4YLR164W MRPS8Q03799 155 aa7.56□□□□□ -1.2
SHH4YLR164W GRH1Q04410 372 aaKnown RBP7.56□□□□□ -1.2
SHH4YLR164W IRC22P40006 225 aa7.55□□□□□ -1.2
SHH4YLR164W DUO1P53168 247 aaKnown RBP7.55□□□□□ -1.2
SHH4YLR164W ALG13P53178 202 aa7.55□□□□□ -1.2
SHH4YLR164W YDR274CP87283 123 aa7.55□□□□□ -1.2
SHH4YLR164W ARC18Q05933 178 aaKnown RBP7.55□□□□□ -1.2
SHH4YLR164W SEC4P07560 215 aaKnown RBP7.54□□□□□ -1.2
SHH4YLR164W VMA16P23968 213 aa7.54□□□□□ -1.2
SHH4YLR164W MRPL28P36527 147 aa7.54□□□□□ -1.2
SHH4YLR164W SUR2P38992 349 aa7.54□□□□□ -1.2
SHH4YLR164W ATG33Q06485 197 aa7.54□□□□□ -1.2
SHH4YLR164W TIM22Q12328 207 aa7.54□□□□□ -1.2
SHH4YLR164W RPL23AP0CX41 137 aaKnown RBP7.53□□□□□ -1.2
SHH4YLR164W RPL23BP0CX42 137 aaKnown RBP7.53□□□□□ -1.2
SHH4YLR164W THG1P53215 237 aaKnown RBP7.53□□□□□ -1.2
SHH4YLR164W UTP23Q12339 254 aaKnown RBP7.53□□□□□ -1.2
SHH4YLR164W VAR1P02381 398 aa7.52□□□□□ -1.21
SHH4YLR164W RPL12AP0CX53 165 aaKnown RBP7.52□□□□□ -1.21
SHH4YLR164W RPL12BP0CX54 165 aa7.52□□□□□ -1.21
SHH4YLR164W AGA1P32323 725 aa7.52□□□□□ -1.21
SHH4YLR164W SDH8P38345 138 aa7.52□□□□□ -1.21
SHH4YLR164W YJR096WP47137 282 aa7.52□□□□□ -1.21
SHH4YLR164W CSM4Q08955 156 aa7.52□□□□□ -1.21
SHH4YLR164W FSF1Q12029 327 aaKnown RBP7.52□□□□□ -1.21
SHH4YLR164W YPL162CQ12042 273 aa7.52□□□□□ -1.21
SHH4YLR164W UPS3Q04006 179 aa7.51□□□□□ -1.21
SHH4YLR164W ZRT1P32804 376 aa7.5□□□□□ -1.21
SHH4YLR164W PET8P38921 284 aa7.5□□□□□ -1.21
SHH4YLR164W PAU7P39545 55 aa7.5□□□□□ -1.21
SHH4YLR164W SEN15Q04675 128 aa7.5□□□□□ -1.21
SHH4YLR164W YPR063CQ12160 140 aa7.5□□□□□ -1.21
SHH4YLR164W RPS22BQ3E7Y3 130 aaKnown RBP7.5□□□□□ -1.21
SHH4YLR164W YKR032WP36127 104 aa7.49□□□□□ -1.21
SHH4YLR164W GPI19Q04082 140 aa7.49□□□□□ -1.21
SHH4YLR164W GTO3Q04806 366 aa7.49□□□□□ -1.21
SHH4YLR164W ISU2Q12056 156 aa7.49□□□□□ -1.21
SHH4YLR164W YBR200W-AQ3E755 54 aa7.49□□□□□ -1.21
SHH4YLR164W DIA1P54005 336 aa7.48□□□□□ -1.21
SHH4YLR164W DXO1Q06349 442 aa7.48□□□□□ -1.21
SHH4YLR164W RPL27AP0C2H6 136 aaKnown RBP7.47□□□□□ -1.21
SHH4YLR164W SSS1P35179 80 aa7.47□□□□□ -1.21
SHH4YLR164W NRG2P38082 220 aa7.47□□□□□ -1.21
SHH4YLR164W YHR140WP38842 239 aa7.47□□□□□ -1.21
SHH4YLR164W MSC3Q05812 728 aa7.47□□□□□ -1.21
SHH4YLR164W RPL16BP26785 198 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 88.7 ms