RNA–Protein interactions for RNA: YLR047C

FRE8, Transcript of Protein with sequence similarity to iron/copper reductases, yeastyeast

Gene FRE8, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FRE8YLR047C RPB7P34087 171 aa2.16□□□□□ -2.06
FRE8YLR047C YRA2P36036 203 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
FRE8YLR047C SHE2P36068 246 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
FRE8YLR047C SDH4P37298 181 aa2.16□□□□□ -2.06
FRE8YLR047C AME1P38313 324 aa2.16□□□□□ -2.06
FRE8YLR047C SMD3P43321 101 aaKnown RBP2.16□□□□□ -2.06
FRE8YLR047C DIE2P50076 525 aa2.16□□□□□ -2.06
FRE8YLR047C Q0255P03881 472 aa2.15□□□□□ -2.07
FRE8YLR047C YHR032W-AP0C5N6 59 aa2.15□□□□□ -2.07
FRE8YLR047C MAK3Q03503 176 aa2.15□□□□□ -2.07
FRE8YLR047C YOR283WQ12040 230 aaKnown RBP2.15□□□□□ -2.07
FRE8YLR047C ODC2Q99297 307 aa2.15□□□□□ -2.07
FRE8YLR047C YLR156WP0CE96 114 aa2.14□□□□□ -2.07
FRE8YLR047C YLR159WP0CE97 114 aa2.14□□□□□ -2.07
FRE8YLR047C YLR161WP0CE98 114 aa2.14□□□□□ -2.07
FRE8YLR047C PET54P10834 293 aa2.14□□□□□ -2.07
FRE8YLR047C YKR045CP36138 183 aa2.14□□□□□ -2.07
FRE8YLR047C ARC15P40518 154 aaRIP-Chip data2.14□□□□□ -2.07not detected
FRE8YLR047C YPR108W-AQ3E7B3 70 aa2.14□□□□□ -2.07
FRE8YLR047C YLR365WQ7LIF2 110 aa2.14□□□□□ -2.07
FRE8YLR047C RPL9AP05738 191 aaKnown RBP2.14□□□□□ -2.07
FRE8YLR047C ROX3P25046 220 aa2.14□□□□□ -2.07
FRE8YLR047C HYM1P32464 399 aa2.14□□□□□ -2.07
FRE8YLR047C FCY21P40039 528 aa2.14□□□□□ -2.07
FRE8YLR047C RFC2P40348 353 aa2.14□□□□□ -2.07
FRE8YLR047C YIR035CP40579 254 aa2.14□□□□□ -2.07
FRE8YLR047C YJL218WP40892 196 aaKnown RBP2.14□□□□□ -2.07
FRE8YLR047C ERG25P53045 309 aa2.14□□□□□ -2.07
FRE8YLR047C ATG41Q12048 136 aa2.14□□□□□ -2.07
FRE8YLR047C QCR2P07257 368 aa2.13□□□□□ -2.07
FRE8YLR047C MAG1P22134 296 aaKnown RBP2.13□□□□□ -2.07
FRE8YLR047C MRS4P23500 304 aa2.13□□□□□ -2.07
FRE8YLR047C CNB1P25296 175 aa2.13□□□□□ -2.07
FRE8YLR047C MBF1O14467 151 aaKnown RBP2.13□□□□□ -2.07
FRE8YLR047C MRPL38P35996 138 aaPredicted RBP2.13□□□□□ -2.07
FRE8YLR047C MPC2P38857 129 aa2.13□□□□□ -2.07
FRE8YLR047C ARP3P47117 449 aaKnown RBP2.13□□□□□ -2.07
FRE8YLR047C YGR042WP53227 271 aa2.13□□□□□ -2.07
FRE8YLR047C YDR274CP87283 123 aa2.13□□□□□ -2.07
FRE8YLR047C BOL1Q3E793 110 aa2.13□□□□□ -2.07
FRE8YLR047C ADH3P07246 375 aaKnown RBP2.12□□□□□ -2.07
FRE8YLR047C SEN2P16658 377 aa2.12□□□□□ -2.07
FRE8YLR047C YHR138CP38841 114 aaPredicted RBP2.12□□□□□ -2.07
FRE8YLR047C GLE2P40066 365 aa2.12□□□□□ -2.07
FRE8YLR047C YGR219WP53307 113 aa2.12□□□□□ -2.07
FRE8YLR047C HRD1Q08109 551 aa2.12□□□□□ -2.07
FRE8YLR047C FEX1Q08913 375 aa2.12□□□□□ -2.07
FRE8YLR047C FEX2Q08991 375 aa2.12□□□□□ -2.07
FRE8YLR047C ACP1P32463 125 aa2.11□□□□□ -2.07
FRE8YLR047C YKR032WP36127 104 aa2.11□□□□□ -2.07
FRE8YLR047C YDL085C-AQ3E7B7 68 aaKnown RBP2.11□□□□□ -2.07
FRE8YLR047C HUG1Q6Q5K6 68 aa2.11□□□□□ -2.07
FRE8YLR047C NOP1P15646 327 aaKnown RBP2.11□□□□□ -2.07
FRE8YLR047C KRE1P17260 313 aa2.11□□□□□ -2.07
FRE8YLR047C FMP23P38231 175 aa2.11□□□□□ -2.07
FRE8YLR047C HTD2P38790 280 aaKnown RBP2.11□□□□□ -2.07
FRE8YLR047C LST8P41318 303 aa2.11□□□□□ -2.07
FRE8YLR047C YJR111CP47148 283 aaKnown RBP2.11□□□□□ -2.07
FRE8YLR047C ARO8P53090 500 aaKnown RBP2.11□□□□□ -2.07
FRE8YLR047C KEI1Q06346 221 aa2.11□□□□□ -2.07
FRE8YLR047C IRC23Q08416 157 aa2.11□□□□□ -2.07
FRE8YLR047C RPB3P16370 318 aaKnown RBP2.1□□□□□ -2.07
FRE8YLR047C BET1P22804 142 aa2.1□□□□□ -2.07
FRE8YLR047C FMT1P32785 401 aa2.1□□□□□ -2.07
FRE8YLR047C YPT31P38555 223 aaKnown RBP2.1□□□□□ -2.07
FRE8YLR047C RBL2P48606 106 aaKnown RBP2.1□□□□□ -2.07
FRE8YLR047C AIM34Q03673 198 aa2.1□□□□□ -2.07
FRE8YLR047C YPR195CQ06594 109 aa2.1□□□□□ -2.07
FRE8YLR047C YLR031WQ07978 186 aa2.1□□□□□ -2.07
FRE8YLR047C YLR050CQ12155 161 aaKnown RBP2.1□□□□□ -2.07
FRE8YLR047C YDL012CQ12489 107 aa2.1□□□□□ -2.07
FRE8YLR047C TAR1Q8TGM6 124 aa2.1□□□□□ -2.07
FRE8YLR047C SRL3P36167 246 aa2.1□□□□□ -2.07
FRE8YLR047C NRG2P38082 220 aa2.1□□□□□ -2.07
FRE8YLR047C GVP36P40531 326 aaKnown RBP2.1□□□□□ -2.07
FRE8YLR047C SUS1Q6WNK7 96 aa2.1□□□□□ -2.07
FRE8YLR047C PET20Q99373 253 aa2.1□□□□□ -2.07
FRE8YLR047C ATP15P21306 62 aa2.09□□□□□ -2.07
FRE8YLR047C YER137CP40083 148 aaKnown RBP2.09□□□□□ -2.07
FRE8YLR047C YGR026WP53217 278 aa2.09□□□□□ -2.07
FRE8YLR047C SHH4Q06236 168 aa2.09□□□□□ -2.07
FRE8YLR047C SYM1Q06563 197 aa2.09□□□□□ -2.07
FRE8YLR047C DGA1Q08650 418 aa2.09□□□□□ -2.07
FRE8YLR047C RAD28Q12021 506 aa2.09□□□□□ -2.07
FRE8YLR047C YPR013CQ12145 317 aa2.09□□□□□ -2.07
FRE8YLR047C DER1P38307 211 aa2.08□□□□□ -2.08
FRE8YLR047C YFR035CP43608 114 aa2.08□□□□□ -2.08
FRE8YLR047C TMA20P89886 181 aaPredicted RBP2.08□□□□□ -2.08
FRE8YLR047C THI74Q04083 370 aa2.08□□□□□ -2.08
FRE8YLR047C SCP1Q08873 200 aa2.08□□□□□ -2.08
FRE8YLR047C URA5P13298 226 aaKnown RBP2.08□□□□□ -2.08
FRE8YLR047C RDS3Q06835 107 aaPredicted RBP2.08□□□□□ -2.08
FRE8YLR047C YGL258W-AQ3E740 77 aa2.08□□□□□ -2.08
FRE8YLR047C RPS28BP0C0X0 67 aaKnown RBP2.07□□□□□ -2.08
FRE8YLR047C SKI6P46948 246 aaPredicted RBP2.07□□□□□ -2.08
FRE8YLR047C LSM1P47017 172 aaKnown RBP2.07□□□□□ -2.08
FRE8YLR047C TDA4P47153 279 aa2.07□□□□□ -2.08
FRE8YLR047C YJR146WP47174 117 aa2.07□□□□□ -2.08
FRE8YLR047C COX12Q01519 83 aa2.07□□□□□ -2.08
FRE8YLR047C YOR385WQ08909 290 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 41.2 ms