RNA–Protein interactions for RNA: YKL057C

NUP120, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeast

Gene NUP120, Length 3,114 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP120	YKL057C	YNL277W-A	Q3E7Z0	62 aa		0.51	□□□□□ -2.33
NUP120	YKL057C	BNI1	P41832	1953 aa		0.51	□□□□□ -2.33
NUP120	YKL057C	YRF1-2	P40105	1681 aa		0.51	□□□□□ -2.33
NUP120	YKL057C	THO2	P53552	1597 aa	Known RBP	0.51	□□□□□ -2.33
NUP120	YKL057C	SFT2	P38166	215 aa		0.51	□□□□□ -2.33
NUP120	YKL057C	EFG1	Q3E705	233 aa	Known RBP	0.51	□□□□□ -2.33
NUP120	YKL057C	HAP1	P0CE41	1502 aa		0.51	□□□□□ -2.33
NUP120	YKL057C	ROM2	P51862	1356 aa	Known RBP	0.51	□□□□□ -2.33
NUP120	YKL057C	HSP12	P22943	109 aa	Known RBP	0.51	□□□□□ -2.33
NUP120	YKL057C	GRX3	Q03835	250 aa		0.51	□□□□□ -2.33
NUP120	YKL057C	MPM1	P40364	252 aa		0.5	□□□□□ -2.33
NUP120	YKL057C	YHR213W	P0CI67	198 aa		0.5	□□□□□ -2.33
NUP120	YKL057C	LSM8	P47093	109 aa	Known RBP	0.5	□□□□□ -2.33
NUP120	YKL057C	COF1	Q03048	143 aa	Known RBP	0.5	□□□□□ -2.33
NUP120	YKL057C	NAT5	Q08689	176 aa		0.5	□□□□□ -2.33
NUP120	YKL057C	BUD4	P47136	1447 aa		0.5	□□□□□ -2.33
NUP120	YKL057C	GSP1	P32835	219 aa	Known RBP	0.49	□□□□□ -2.33
NUP120	YKL057C	FIT3	Q08907	204 aa		0.49	□□□□□ -2.33
NUP120	YKL057C	ESC1	Q03661	1658 aa	Known RBP	0.49	□□□□□ -2.33
NUP120	YKL057C	FUN14	P18411	198 aa		0.49	□□□□□ -2.33
NUP120	YKL057C	SSK2	P53599	1579 aa		0.49	□□□□□ -2.33
NUP120	YKL057C	XRN1	P22147	1528 aa	Known RBP	0.49	□□□□□ -2.33
NUP120	YKL057C	DNF2	Q12675	1612 aa		0.49	□□□□□ -2.33
NUP120	YKL057C	YMR122C	Q03879	124 aa		0.49	□□□□□ -2.33
NUP120	YKL057C	YGR042W	P53227	271 aa		0.48	□□□□□ -2.33
NUP120	YKL057C	AQY2	P0CD90	149 aa		0.48	□□□□□ -2.33
NUP120	YKL057C	FMP23	P38231	175 aa		0.48	□□□□□ -2.33
NUP120	YKL057C	YPR203W	Q08994	102 aa		0.48	□□□□□ -2.33
NUP120	YKL057C	YER188C-A	P0C0V2	99 aa		0.47	□□□□□ -2.33
NUP120	YKL057C	SUA7	P29055	345 aa	Predicted RBP	0.47	□□□□□ -2.33
NUP120	YKL057C	OCA6	Q12454	224 aa		0.47	□□□□□ -2.33
NUP120	YKL057C	SLO1	Q3E784	85 aa		0.47	□□□□□ -2.33
NUP120	YKL057C	CYC2	P38909	366 aa		0.47	□□□□□ -2.33
NUP120	YKL057C	YIL014C-A	Q02598	104 aa		0.47	□□□□□ -2.33
NUP120	YKL057C	RIM15	P43565	1770 aa		0.47	□□□□□ -2.33
NUP120	YKL057C	SLH1	P53327	1967 aa	Known RBP	0.47	□□□□□ -2.33
NUP120	YKL057C	QCR10	P37299	77 aa		0.46	□□□□□ -2.34
NUP120	YKL057C	POL1	P13382	1468 aa		0.46	□□□□□ -2.34
NUP120	YKL057C	PAU21	P0CE86	164 aa		0.46	□□□□□ -2.34
NUP120	YKL057C	PAU22	P0CE87	164 aa		0.46	□□□□□ -2.34
NUP120	YKL057C	RPS1B	P23248	255 aa	Known RBP	0.46	□□□□□ -2.34
NUP120	YKL057C	CMC4	Q3E7A9	73 aa		0.46	□□□□□ -2.34
NUP120	YKL057C	CAT8	P39113	1433 aa		0.46	□□□□□ -2.34
NUP120	YKL057C	POP7	P38291	140 aa		0.45	□□□□□ -2.34
NUP120	YKL057C	YMR141C	P40211	102 aa		0.45	□□□□□ -2.34
NUP120	YKL057C	GAT4	P40569	121 aa		0.45	□□□□□ -2.34
NUP120	YKL057C	JIP3	O13555	125 aa		0.44	□□□□□ -2.34
NUP120	YKL057C	RTC6	O14464	93 aa		0.44	□□□□□ -2.34
NUP120	YKL057C	INO4	P13902	151 aa		0.44	□□□□□ -2.34
NUP120	YKL057C	RPS20	P38701	121 aa	Known RBP	0.44	□□□□□ -2.34
NUP120	YKL057C	UGX2	P32772	223 aa		0.44	□□□□□ -2.34
NUP120	YKL057C	YGR017W	P53210	297 aa		0.44	□□□□□ -2.34
NUP120	YKL057C	ECM5	Q03214	1411 aa		0.44	□□□□□ -2.34
NUP120	YKL057C	COX5B	P00425	151 aa		0.43	□□□□□ -2.34
NUP120	YKL057C	HAP3	P13434	144 aa		0.43	□□□□□ -2.34
NUP120	YKL057C	RPA190	P10964	1664 aa	Known RBP	0.43	□□□□□ -2.34
NUP120	YKL057C	SPC2	Q04969	178 aa		0.43	□□□□□ -2.34
NUP120	YKL057C	TY1B-BR	Q12193	1756 aa		0.43	□□□□□ -2.34
NUP120	YKL057C	YOL013W-A	P0C272	63 aa	Predicted RBP	0.42	□□□□□ -2.34
NUP120	YKL057C	MRS4	P23500	304 aa		0.42	□□□□□ -2.34
NUP120	YKL057C	MRPL11	P36521	249 aa	Predicted RBP	0.42	□□□□□ -2.34
NUP120	YKL057C	VMA10	P48836	114 aa	Known RBP	0.42	□□□□□ -2.34
NUP120	YKL057C	YGL014C-A	P0C5N1	53 aa		0.42	□□□□□ -2.34
NUP120	YKL057C	RPS29B	P41058	56 aa	Known RBP	0.42	□□□□□ -2.34
NUP120	YKL057C	RBL2	P48606	106 aa	Known RBP	0.42	□□□□□ -2.34
NUP120	YKL057C	YDR102C	Q03864	110 aa		0.42	□□□□□ -2.34
NUP120	YKL057C	YCL048W-A	Q2V2Q2	79 aa		0.42	□□□□□ -2.34
NUP120	YKL057C	ULS1	Q08562	1619 aa		0.42	□□□□□ -2.34
NUP120	YKL057C	YGR164W	P53291	111 aa		0.42	□□□□□ -2.34
NUP120	YKL057C	YLR419W	Q06698	1435 aa	Known RBP	0.42	□□□□□ -2.34
NUP120	YKL057C	YOR385W	Q08909	290 aa		0.42	□□□□□ -2.34
NUP120	YKL057C	AIM18	P38884	321 aa		0.41	□□□□□ -2.34
NUP120	YKL057C	COA4	Q05809	96 aa		0.41	□□□□□ -2.34
NUP120	YKL057C	KTI11	Q3E840	82 aa		0.41	□□□□□ -2.34
NUP120	YKL057C	FYV5	P25585	152 aa		0.41	□□□□□ -2.34
NUP120	YKL057C	RPO31	P04051	1460 aa		0.41	□□□□□ -2.34
NUP120	YKL057C	MRPL31	P14063	131 aa	Predicted RBP	0.4	□□□□□ -2.34
NUP120	YKL057C	AIM11	P87275	137 aa		0.4	□□□□□ -2.34
NUP120	YKL057C	COX19	Q3E731	98 aa		0.4	□□□□□ -2.34
NUP120	YKL057C	SCS22	Q6Q595	175 aa		0.4	□□□□□ -2.34
NUP120	YKL057C	CHC1	P22137	1653 aa	Known RBP	0.4	□□□□□ -2.34
NUP120	YKL057C	SPP41	P38904	1435 aa		0.4	□□□□□ -2.35
NUP120	YKL057C	DNF3	Q12674	1656 aa		0.4	□□□□□ -2.35
NUP120	YKL057C	YNL200C	P40165	246 aa	Known RBP	0.4	□□□□□ -2.35
NUP120	YKL057C	PHS1	P40857	217 aa		0.4	□□□□□ -2.35
NUP120	YKL057C	CDC25	P04821	1589 aa		0.4	□□□□□ -2.35
NUP120	YKL057C	PEP1	P32319	1579 aa		0.4	□□□□□ -2.35
NUP120	YKL057C	IML1	P47170	1584 aa		0.4	□□□□□ -2.35
NUP120	YKL057C	PRS3	P38689	320 aa	Known RBP	0.4	□□□□□ -2.35
NUP120	YKL057C	TY1B-BL	Q12490	1755 aa		0.4	□□□□□ -2.35
NUP120	YKL057C	HIR3	P47171	1648 aa		0.39	□□□□□ -2.35
NUP120	YKL057C	SNT2	P53127	1403 aa		0.39	□□□□□ -2.35
NUP120	YKL057C	TY4B-H	P0C2J7	1802 aa		0.39	□□□□□ -2.35
NUP120	YKL057C	PRM3	Q08931	133 aa		0.39	□□□□□ -2.35
NUP120	YKL057C	RPC19	P28000	142 aa	Known RBP	0.38	□□□□□ -2.35
NUP120	YKL057C	SWC7	Q06707	132 aa		0.38	□□□□□ -2.35
NUP120	YKL057C	YCF1	P39109	1515 aa	Known RBP	0.38	□□□□□ -2.35
NUP120	YKL057C	GEA2	P39993	1459 aa	Known RBP	0.38	□□□□□ -2.35
NUP120	YKL057C	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.38	□□□□□ -2.35
NUP120	YKL057C	GEA1	P47102	1408 aa	Predicted RBP	0.38	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms