RNA–Protein interactions for RNA: YJR104C

SOD1, Transcript of Cytosolic copper-zinc superoxide dismutase, yeast

Gene SOD1, Length 465 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOD1	YJR104C	SBH1	P52870	82 aa		2.94	□□□□□ -1.94
SOD1	YJR104C	CAX4	P53223	239 aa		2.94	□□□□□ -1.94
SOD1	YJR104C	POP3	P53833	195 aa	Predicted RBP	2.94	□□□□□ -1.94
SOD1	YJR104C	SWT21	P53873	357 aa	Predicted RBP	2.94	□□□□□ -1.94
SOD1	YJR104C	YPL039W	Q03080	316 aa		2.94	□□□□□ -1.94
SOD1	YJR104C	YOL029C	Q08187	201 aa		2.94	□□□□□ -1.94
SOD1	YJR104C	MPD1	Q12404	318 aa	Known RBP	2.94	□□□□□ -1.94
SOD1	YJR104C	YFL041W-A	Q3E817	63 aa		2.94	□□□□□ -1.94
SOD1	YJR104C	ENV10	Q99382	181 aa		2.94	□□□□□ -1.94
SOD1	YJR104C	HTL1	Q9URQ5	78 aa		2.94	□□□□□ -1.94
SOD1	YJR104C	URA2	P07259	2214 aa	Known RBP	2.93	□□□□□ -1.94
SOD1	YJR104C	CPR2	P23285	205 aa		2.93	□□□□□ -1.94
SOD1	YJR104C	YCR085W	P25650	117 aa		2.93	□□□□□ -1.94
SOD1	YJR104C	TIM12	P32830	109 aa		2.93	□□□□□ -1.94
SOD1	YJR104C	YKL070W	P36087	169 aa		2.93	□□□□□ -1.94
SOD1	YJR104C	YKR041W	P36134	250 aa		2.93	□□□□□ -1.94
SOD1	YJR104C	SNF11	P38956	169 aa		2.93	□□□□□ -1.94
SOD1	YJR104C	GGC1	P38988	300 aa		2.93	□□□□□ -1.94
SOD1	YJR104C	YJL193W	P39542	402 aa		2.93	□□□□□ -1.94
SOD1	YJR104C	YER181C	P40097	107 aa		2.93	□□□□□ -1.94
SOD1	YJR104C	SAS2	P40963	338 aa		2.93	□□□□□ -1.94
SOD1	YJR104C	CUP9	P41817	306 aa		2.93	□□□□□ -1.94
SOD1	YJR104C	EGT2	P42835	1041 aa		2.93	□□□□□ -1.94
SOD1	YJR104C	GON7	P46984	123 aa		2.93	□□□□□ -1.94
SOD1	YJR104C	BRP1	P53194	125 aa		2.93	□□□□□ -1.94
SOD1	YJR104C	WSC2	P53832	503 aa		2.93	□□□□□ -1.94
SOD1	YJR104C	UPS1	Q05776	175 aa		2.93	□□□□□ -1.94
SOD1	YJR104C	VPS68	Q12016	184 aa		2.93	□□□□□ -1.94
SOD1	YJR104C	YDR029W	Q12111	104 aa		2.93	□□□□□ -1.94
SOD1	YJR104C	RFM1	Q12192	310 aa		2.93	□□□□□ -1.94
SOD1	YJR104C	AYT1	Q12226	474 aa		2.93	□□□□□ -1.94
SOD1	YJR104C	COX17	Q12287	69 aa		2.93	□□□□□ -1.94
SOD1	YJR104C	YAL063C-A	Q3E791	96 aa		2.93	□□□□□ -1.94
SOD1	YJR104C	KTI11	Q3E840	82 aa		2.93	□□□□□ -1.94
SOD1	YJR104C	YPL229W	Q99395	206 aa		2.93	□□□□□ -1.94
SOD1	YJR104C	Q0297	Q9ZZV8	51 aa		2.93	□□□□□ -1.94
SOD1	YJR104C	PHO85	P17157	305 aa		2.92	□□□□□ -1.94
SOD1	YJR104C	APS1	P35181	156 aa		2.92	□□□□□ -1.94
SOD1	YJR104C	FRM2	P37261	193 aa		2.92	□□□□□ -1.94
SOD1	YJR104C	IML3	P38265	245 aa		2.92	□□□□□ -1.94
SOD1	YJR104C	PCL5	P38794	229 aa		2.92	□□□□□ -1.94
SOD1	YJR104C	YNL200C	P40165	246 aa	Known RBP	2.92	□□□□□ -1.94
SOD1	YJR104C	YGR269W	P40326	108 aa		2.92	□□□□□ -1.94
SOD1	YJR104C	UBC11	P52492	156 aa		2.92	□□□□□ -1.94
SOD1	YJR104C	CDH1	P53197	566 aa		2.92	□□□□□ -1.94
SOD1	YJR104C	CPD1	P53314	239 aa		2.92	□□□□□ -1.94
SOD1	YJR104C	MIX17	Q03667	156 aa		2.92	□□□□□ -1.94
SOD1	YJR104C	YMR007W	Q03675	126 aa		2.92	□□□□□ -1.94
SOD1	YJR104C	RDL2	Q08742	149 aa	Known RBP	2.92	□□□□□ -1.94
SOD1	YJR104C	FIT3	Q08907	204 aa		2.92	□□□□□ -1.94
SOD1	YJR104C	YDR119W-A	Q2V2P9	66 aa		2.92	□□□□□ -1.94
SOD1	YJR104C	OPI3	P05375	206 aa		2.91	□□□□□ -1.94
SOD1	YJR104C	YLL053C	P0CD98	152 aa		2.91	□□□□□ -1.94
SOD1	YJR104C	MDM10	P18409	493 aa		2.91	□□□□□ -1.94
SOD1	YJR104C	MID2	P36027	376 aa		2.91	□□□□□ -1.94
SOD1	YJR104C	ADH5	P38113	351 aa	Known RBP	2.91	□□□□□ -1.94
SOD1	YJR104C	YPL073C	P40323	161 aa		2.91	□□□□□ -1.94
SOD1	YJR104C	YIL163C	P40448	117 aa		2.91	□□□□□ -1.94
SOD1	YJR104C	LCB3	P47013	409 aa		2.91	□□□□□ -1.94
SOD1	YJR104C	BRR6	P53062	197 aa		2.91	□□□□□ -1.94
SOD1	YJR104C	SDS23	P53172	527 aa		2.91	□□□□□ -1.94
SOD1	YJR104C	ALG13	P53178	202 aa		2.91	□□□□□ -1.94
SOD1	YJR104C	ERG13	P54839	491 aa	Known RBP	2.91	□□□□□ -1.94
SOD1	YJR104C	TIM10	P87108	93 aa		2.91	□□□□□ -1.94
SOD1	YJR104C	COX12	Q01519	83 aa		2.91	□□□□□ -1.94
SOD1	YJR104C	FCF1	Q05498	189 aa	Predicted RBP	2.91	□□□□□ -1.94
SOD1	YJR104C	NCE102	Q12207	173 aa	RIP-Chip data	2.91	□□□□□ -1.94	not detected
SOD1	YJR104C	YPR064W	Q12492	139 aa		2.91	□□□□□ -1.94
SOD1	YJR104C	DFM1	Q12743	341 aa	Known RBP	2.91	□□□□□ -1.94
SOD1	YJR104C	YLR365W	Q7LIF2	110 aa		2.91	□□□□□ -1.94
SOD1	YJR104C	RPL23A	P0CX41	137 aa	Known RBP	2.9	□□□□□ -1.95
SOD1	YJR104C	RPL23B	P0CX42	137 aa	Known RBP	2.9	□□□□□ -1.95
SOD1	YJR104C	REC114	P32841	428 aa		2.9	□□□□□ -1.95
SOD1	YJR104C	TOM6	P33448	61 aa		2.9	□□□□□ -1.95
SOD1	YJR104C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	2.9	□□□□□ -1.95	not detected
SOD1	YJR104C	MRPS5	P33759	307 aa		2.9	□□□□□ -1.95
SOD1	YJR104C	LYS1	P38998	373 aa	RIP-Chip data	2.9	□□□□□ -1.95	not detected
SOD1	YJR104C	DSK2	P48510	373 aa		2.9	□□□□□ -1.95
SOD1	YJR104C	KNH1	P50112	268 aa		2.9	□□□□□ -1.95
SOD1	YJR104C	YNR071C	P53757	342 aa		2.9	□□□□□ -1.95
SOD1	YJR104C	ATP19	P81451	68 aa		2.9	□□□□□ -1.95
SOD1	YJR104C	COF1	Q03048	143 aa	Known RBP	2.9	□□□□□ -1.95
SOD1	YJR104C	MRX11	Q03079	207 aa		2.9	□□□□□ -1.95
SOD1	YJR104C	YOR292C	Q08743	309 aa		2.9	□□□□□ -1.95
SOD1	YJR104C	YLR412C-A	Q3E742	68 aa		2.9	□□□□□ -1.95
SOD1	YJR104C	CCW14	O13547	238 aa		2.89	□□□□□ -1.95
SOD1	YJR104C	SPS100	P13130	326 aa		2.89	□□□□□ -1.95
SOD1	YJR104C	YSR3	P23501	404 aa		2.89	□□□□□ -1.95
SOD1	YJR104C	NRG2	P38082	220 aa		2.89	□□□□□ -1.95
SOD1	YJR104C	OM14	P38325	134 aa		2.89	□□□□□ -1.95
SOD1	YJR104C	YHL042W	P38729	150 aa		2.89	□□□□□ -1.95
SOD1	YJR104C	YPI1	P43587	155 aa		2.89	□□□□□ -1.95
SOD1	YJR104C	PET191	Q02772	108 aa		2.89	□□□□□ -1.95
SOD1	YJR104C	RRG8	Q06109	277 aa		2.89	□□□□□ -1.95
SOD1	YJR104C	RAF1	Q06891	181 aa		2.89	□□□□□ -1.95
SOD1	YJR104C	HRT1	Q08273	121 aa		2.89	□□□□□ -1.95
SOD1	YJR104C	YOR186W	Q08560	144 aa		2.89	□□□□□ -1.95
SOD1	YJR104C	YPR108W-A	Q3E7B3	70 aa		2.89	□□□□□ -1.95
SOD1	YJR104C	VPS63	O13549	108 aa		2.88	□□□□□ -1.95
SOD1	YJR104C	YPS1	P32329	569 aa		2.88	□□□□□ -1.95

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