RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C SNX4P47057 423 aa2.45□□□□□ -2.02
SDS3YIL084C YAE1P47118 141 aaPredicted RBP2.45□□□□□ -2.02
SDS3YIL084C MRPS8Q03799 155 aa2.45□□□□□ -2.02
SDS3YIL084C VAM10Q08474 114 aa2.45□□□□□ -2.02
SDS3YIL084C ATG31Q12421 196 aa2.45□□□□□ -2.02
SDS3YIL084C RPL24BP24000 155 aaKnown RBP2.44□□□□□ -2.02
SDS3YIL084C YBL071CP38185 102 aa2.44□□□□□ -2.02
SDS3YIL084C GOS1P38736 223 aa2.44□□□□□ -2.02
SDS3YIL084C BFR1P38934 470 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
SDS3YIL084C NSA2P40078 261 aaKnown RBP2.44□□□□□ -2.02
SDS3YIL084C PDS1P40316 373 aaPredicted RBP2.44□□□□□ -2.02
SDS3YIL084C GVP36P40531 326 aaKnown RBP2.44□□□□□ -2.02
SDS3YIL084C MSS2P40990 351 aa2.44□□□□□ -2.02
SDS3YIL084C YJR015WP47090 510 aa2.44□□□□□ -2.02
SDS3YIL084C YJR146WP47174 117 aa2.44□□□□□ -2.02
SDS3YIL084C YGL034CP53186 121 aa2.44□□□□□ -2.02
SDS3YIL084C EST3Q03096 181 aa2.44□□□□□ -2.02
SDS3YIL084C YNG1Q08465 219 aa2.44□□□□□ -2.02
SDS3YIL084C RAD28Q12021 506 aa2.44□□□□□ -2.02
SDS3YIL084C YGL258W-AQ3E740 77 aa2.44□□□□□ -2.02
SDS3YIL084C MED11Q99278 115 aa2.44□□□□□ -2.02
SDS3YIL084C RPS11AP0CX47 156 aaKnown RBP2.43□□□□□ -2.02
SDS3YIL084C RPS11BP0CX48 156 aaKnown RBP2.43□□□□□ -2.02
SDS3YIL084C HTD2P38790 280 aaKnown RBP2.43□□□□□ -2.02
SDS3YIL084C GLE2P40066 365 aa2.43□□□□□ -2.02
SDS3YIL084C MCM22P47167 239 aa2.43□□□□□ -2.02
SDS3YIL084C GRX3Q03835 250 aa2.43□□□□□ -2.02
SDS3YIL084C THI74Q04083 370 aa2.43□□□□□ -2.02
SDS3YIL084C YLR179CQ06252 201 aaKnown RBP2.43□□□□□ -2.02
SDS3YIL084C YNL146C-AQ3E7Z1 64 aa2.43□□□□□ -2.02
SDS3YIL084C PET20Q99373 253 aa2.43□□□□□ -2.02
SDS3YIL084C QCR7P00128 127 aa2.42□□□□□ -2.02
SDS3YIL084C YHR213WP0CI67 198 aa2.42□□□□□ -2.02
SDS3YIL084C VMA10P48836 114 aaKnown RBP2.42□□□□□ -2.02
SDS3YIL084C TOM7P53507 60 aa2.42□□□□□ -2.02
SDS3YIL084C YOR283WQ12040 230 aaKnown RBP2.42□□□□□ -2.02
SDS3YIL084C POC4Q12245 148 aaPredicted RBP2.42□□□□□ -2.02
SDS3YIL084C RPL2AP0CX45 254 aaKnown RBP2.41□□□□□ -2.02
SDS3YIL084C RPL2BP0CX46 254 aaKnown RBP2.41□□□□□ -2.02
SDS3YIL084C PAN3P36102 679 aaPredicted RBP2.41□□□□□ -2.02
SDS3YIL084C ARC15P40518 154 aaRIP-Chip data2.41□□□□□ -2.02not detected
SDS3YIL084C TIM11P81449 96 aaPredicted RBP2.41□□□□□ -2.02
SDS3YIL084C UBC7Q02159 165 aa2.41□□□□□ -2.02
SDS3YIL084C KEI1Q06346 221 aa2.41□□□□□ -2.02
SDS3YIL084C YOL160WQ08321 113 aa2.41□□□□□ -2.02
SDS3YIL084C SCP1Q08873 200 aa2.41□□□□□ -2.02
SDS3YIL084C EMC6Q12431 108 aa2.41□□□□□ -2.02
SDS3YIL084C CDC7P06243 507 aa2.4□□□□□ -2.03
SDS3YIL084C SCM4P32564 187 aa2.4□□□□□ -2.03
SDS3YIL084C IRC22P40006 225 aa2.4□□□□□ -2.03
SDS3YIL084C FRQ1Q06389 190 aa2.4□□□□□ -2.03
SDS3YIL084C SYM1Q06563 197 aa2.4□□□□□ -2.03
SDS3YIL084C YCR016WP25617 290 aaKnown RBP2.39□□□□□ -2.03
SDS3YIL084C GIM3P53900 129 aa2.39□□□□□ -2.03
SDS3YIL084C YPL162CQ12042 273 aa2.39□□□□□ -2.03
SDS3YIL084C RRT15Q3E811 62 aa2.39□□□□□ -2.03
SDS3YIL084C FCY2P17064 533 aa2.38□□□□□ -2.03
SDS3YIL084C SHB17P36136 271 aaKnown RBP2.38□□□□□ -2.03
SDS3YIL084C ERV15P38312 142 aa2.38□□□□□ -2.03
SDS3YIL084C HPA3P39979 161 aa2.38□□□□□ -2.03
SDS3YIL084C IMP2P46972 177 aa2.38□□□□□ -2.03
SDS3YIL084C VPS28Q02767 242 aa2.38□□□□□ -2.03
SDS3YIL084C YCR075W-AQ3E830 75 aa2.38□□□□□ -2.03
SDS3YIL084C SUS1Q6WNK7 96 aa2.38□□□□□ -2.03
SDS3YIL084C ADH3P07246 375 aaKnown RBP2.37□□□□□ -2.03
SDS3YIL084C PUT1P09368 476 aa2.37□□□□□ -2.03
SDS3YIL084C MSA2P36157 363 aa2.37□□□□□ -2.03
SDS3YIL084C LSM2P38203 95 aaKnown RBP2.37□□□□□ -2.03
SDS3YIL084C CSH1P38287 376 aa2.37□□□□□ -2.03
SDS3YIL084C YHR125WP38831 101 aa2.37□□□□□ -2.03
SDS3YIL084C YGR026WP53217 278 aa2.37□□□□□ -2.03
SDS3YIL084C SDH7Q04401 133 aa2.37□□□□□ -2.03
SDS3YIL084C YPL257WQ08974 193 aa2.37□□□□□ -2.03
SDS3YIL084C Q0255P03881 472 aa2.36□□□□□ -2.03
SDS3YIL084C RPS25BP0C0T4 108 aaKnown RBP2.36□□□□□ -2.03
SDS3YIL084C YDR034C-AP0C289 58 aa2.36□□□□□ -2.03
SDS3YIL084C SFT2P38166 215 aa2.36□□□□□ -2.03
SDS3YIL084C YHR022CP38763 256 aa2.36□□□□□ -2.03
SDS3YIL084C SVP26P38869 228 aa2.36□□□□□ -2.03
SDS3YIL084C ILM1P47155 203 aa2.36□□□□□ -2.03
SDS3YIL084C COA4Q05809 96 aa2.36□□□□□ -2.03
SDS3YIL084C RPS25AQ3E792 108 aaPredicted RBP2.36□□□□□ -2.03
SDS3YIL084C QCR2P07257 368 aa2.35□□□□□ -2.03
SDS3YIL084C MRP17P28778 131 aa2.35□□□□□ -2.03
SDS3YIL084C RTC3P38804 111 aaPredicted RBP2.35□□□□□ -2.03
SDS3YIL084C HUA1P40325 198 aa2.35□□□□□ -2.03
SDS3YIL084C SPC1P46965 94 aa2.35□□□□□ -2.03
SDS3YIL084C AIM25P47140 327 aa2.35□□□□□ -2.03
SDS3YIL084C HTL1Q9URQ5 78 aa2.35□□□□□ -2.03
SDS3YIL084C YHR032W-AP0C5N6 59 aa2.34□□□□□ -2.03
SDS3YIL084C DDR48P18899 430 aaKnown RBP2.34□□□□□ -2.03
SDS3YIL084C DAN1P47178 298 aa2.34□□□□□ -2.03
SDS3YIL084C YLL066W-BQ8TGJ7 56 aa2.34□□□□□ -2.03
SDS3YIL084C RBL2P48606 106 aaKnown RBP2.33□□□□□ -2.04
SDS3YIL084C SHH3Q04487 196 aa2.33□□□□□ -2.04
SDS3YIL084C CCW12Q12127 133 aa2.33□□□□□ -2.04
SDS3YIL084C RDI1Q12434 202 aa2.33□□□□□ -2.04
SDS3YIL084C COA2Q3E823 68 aa2.33□□□□□ -2.04
SDS3YIL084C RTC6O14464 93 aa2.32□□□□□ -2.04
SDS3YIL084C EMP24P32803 203 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 285.6 ms