RNA–Protein interactions for RNA: YER164W

CHD1, Transcript of Chromatin remodeler that regulates various aspects of transcription, yeastyeast

Gene CHD1, Length 4,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHD1YER164W YGL258W-AQ3E740 77 aa3.18□□□□□ -1.9
CHD1YER164W YCR075W-AQ3E830 75 aa3.18□□□□□ -1.9
CHD1YER164W BUD8P41698 603 aa3.18□□□□□ -1.9
CHD1YER164W RHO5P53879 331 aaKnown RBP3.18□□□□□ -1.9
CHD1YER164W BET5Q03630 159 aa3.18□□□□□ -1.9
CHD1YER164W CYC7P00045 113 aa3.18□□□□□ -1.9
CHD1YER164W YPR170W-BP0C5R9 85 aa3.18□□□□□ -1.9
CHD1YER164W PHO85P17157 305 aa3.18□□□□□ -1.9
CHD1YER164W RPL15BP54780 204 aaPredicted RBP3.18□□□□□ -1.9
CHD1YER164W YMR316C-AI2HB70 103 aa3.18□□□□□ -1.9
CHD1YER164W MBF1O14467 151 aaKnown RBP3.18□□□□□ -1.9
CHD1YER164W YKL070WP36087 169 aa3.18□□□□□ -1.9
CHD1YER164W ECO1P43605 281 aa3.18□□□□□ -1.9
CHD1YER164W KEG1P43614 200 aa3.18□□□□□ -1.9
CHD1YER164W LCL3P53153 274 aa3.18□□□□□ -1.9
CHD1YER164W YMR181CQ03231 154 aa3.18□□□□□ -1.9
CHD1YER164W YOR376WQ08900 122 aa3.18□□□□□ -1.9
CHD1YER164W YDR029WQ12111 104 aa3.18□□□□□ -1.9
CHD1YER164W EMC6Q12431 108 aa3.18□□□□□ -1.9
CHD1YER164W URA2P07259 2214 aaKnown RBP3.17□□□□□ -1.9
CHD1YER164W YDR157WA0A023PZE8 133 aa3.17□□□□□ -1.9
CHD1YER164W RPL27AP0C2H6 136 aaKnown RBP3.17□□□□□ -1.9
CHD1YER164W IMP1P28627 190 aa3.17□□□□□ -1.9
CHD1YER164W SWD3P38123 315 aa3.17□□□□□ -1.9
CHD1YER164W KNH1P50112 268 aa3.17□□□□□ -1.9
CHD1YER164W SDC1Q03323 175 aa3.17□□□□□ -1.9
CHD1YER164W YFL054CP43549 646 aa3.17□□□□□ -1.9
CHD1YER164W RRG8Q06109 277 aa3.17□□□□□ -1.9
CHD1YER164W TMA10Q06177 86 aa3.17□□□□□ -1.9
CHD1YER164W POC4Q12245 148 aaPredicted RBP3.17□□□□□ -1.9
CHD1YER164W YLR358CO13565 187 aa3.17□□□□□ -1.9
CHD1YER164W PCL2P25693 308 aa3.17□□□□□ -1.9
CHD1YER164W YBL071CP38185 102 aa3.17□□□□□ -1.9
CHD1YER164W YGR050CP53231 118 aa3.17□□□□□ -1.9
CHD1YER164W NCE102Q12207 173 aaRIP-Chip data3.17□□□□□ -1.9not detected
CHD1YER164W VPS63O13549 108 aa3.16□□□□□ -1.9
CHD1YER164W CDC43P18898 376 aa3.16□□□□□ -1.9
CHD1YER164W YHR140WP38842 239 aa3.16□□□□□ -1.9
CHD1YER164W YHP1Q04116 353 aa3.16□□□□□ -1.9
CHD1YER164W SCW10Q04951 389 aa3.16□□□□□ -1.9
CHD1YER164W PBA1Q05778 276 aa3.16□□□□□ -1.9
CHD1YER164W QRI5P32344 111 aa3.16□□□□□ -1.9
CHD1YER164W YKR041WP36134 250 aa3.16□□□□□ -1.9
CHD1YER164W DSE2P38844 325 aa3.16□□□□□ -1.9
CHD1YER164W YER188WP40103 239 aa3.16□□□□□ -1.9
CHD1YER164W YPI1P43587 155 aa3.16□□□□□ -1.9
CHD1YER164W AYT1Q12226 474 aa3.16□□□□□ -1.9
CHD1YER164W CPR1P14832 162 aaKnown RBP3.16□□□□□ -1.9
CHD1YER164W YDR215CQ12240 137 aa3.16□□□□□ -1.9
CHD1YER164W NUM1Q00402 2748 aa3.16□□□□□ -1.9
CHD1YER164W ECM12O13529 151 aa3.16□□□□□ -1.9
CHD1YER164W PRE3P38624 215 aa3.16□□□□□ -1.9
CHD1YER164W YER121WP40076 114 aa3.16□□□□□ -1.9
CHD1YER164W YNL198CP40166 100 aa3.16□□□□□ -1.9
CHD1YER164W URM1P40554 99 aaPredicted RBP3.16□□□□□ -1.9
CHD1YER164W YJL028WP47062 111 aa3.16□□□□□ -1.9
CHD1YER164W BNA2P47125 453 aa3.16□□□□□ -1.9
CHD1YER164W ATP19P81451 68 aa3.16□□□□□ -1.9
CHD1YER164W TOM40P23644 387 aaKnown RBP3.15□□□□□ -1.9
CHD1YER164W SFT2P38166 215 aa3.15□□□□□ -1.9
CHD1YER164W PGU1P47180 361 aa3.15□□□□□ -1.9
CHD1YER164W LSM6Q06406 86 aaKnown RBP3.15□□□□□ -1.9
CHD1YER164W TIM18Q08749 192 aa3.15□□□□□ -1.9
CHD1YER164W BOL1Q3E793 110 aa3.15□□□□□ -1.9
CHD1YER164W HMRA2P0CY13 119 aa3.15□□□□□ -1.91
CHD1YER164W SCO1P23833 295 aa3.15□□□□□ -1.91
CHD1YER164W YGL015CP33199 130 aa3.15□□□□□ -1.91
CHD1YER164W PRY1P47032 299 aa3.15□□□□□ -1.91
CHD1YER164W YIR021W-AQ3E739 70 aa3.15□□□□□ -1.91
CHD1YER164W IGO2Q9P305 131 aa3.15□□□□□ -1.91
CHD1YER164W MRPS5P33759 307 aa3.15□□□□□ -1.91
CHD1YER164W YRA2P36036 203 aaKnown RBP RIP-Chip data3.15□□□□□ -1.91not detected
CHD1YER164W MTC6P38849 526 aa3.15□□□□□ -1.91
CHD1YER164W YMR103CQ04436 120 aa3.15□□□□□ -1.91
CHD1YER164W PIS1P06197 220 aaKnown RBP3.14□□□□□ -1.91
CHD1YER164W INO2P26798 304 aa3.14□□□□□ -1.91
CHD1YER164W YKL069WP36088 180 aa3.14□□□□□ -1.91
CHD1YER164W YNL217WP40152 326 aa3.14□□□□□ -1.91
CHD1YER164W YOL118CQ08259 102 aa3.14□□□□□ -1.91
CHD1YER164W RNH203Q12338 110 aa3.14□□□□□ -1.91
CHD1YER164W JID1Q12350 301 aa3.14□□□□□ -1.91
CHD1YER164W PBI2P0CT04 75 aaKnown RBP3.14□□□□□ -1.91
CHD1YER164W YKL102CP34249 101 aa3.14□□□□□ -1.91
CHD1YER164W YGR269WP40326 108 aa3.14□□□□□ -1.91
CHD1YER164W MRPL19P53875 158 aa3.14□□□□□ -1.91
CHD1YER164W YOR192C-CQ3E736 78 aa3.14□□□□□ -1.91
CHD1YER164W HUA1P40325 198 aa3.14□□□□□ -1.91
CHD1YER164W TOM7P53507 60 aa3.14□□□□□ -1.91
CHD1YER164W FLO9P39712 1322 aa3.14□□□□□ -1.91
CHD1YER164W MRS3P10566 314 aa3.13□□□□□ -1.91
CHD1YER164W RPB10P22139 70 aa3.13□□□□□ -1.91
CHD1YER164W RPA12P32529 125 aaKnown RBP3.13□□□□□ -1.91
CHD1YER164W YNL200CP40165 246 aaKnown RBP3.13□□□□□ -1.91
CHD1YER164W CPD1P53314 239 aa3.13□□□□□ -1.91
CHD1YER164W YDR114CQ04597 100 aa3.13□□□□□ -1.91
CHD1YER164W ROX3P25046 220 aa3.13□□□□□ -1.91
CHD1YER164W YOR008C-AQ3E7B9 74 aa3.13□□□□□ -1.91
CHD1YER164W YCL021W-AQ96VH3 125 aa3.13□□□□□ -1.91
CHD1YER164W BPH1P25356 2167 aa3.13□□□□□ -1.91
CHD1YER164W LST8P41318 303 aa3.13□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 35.2 ms